Moc01g28980 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g28980
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein WUSCHEL
Location	chr1: 20585212 .. 20586350 (+)
RNA-Seq Expression	Moc01g28980
Synteny	Moc01g28980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGCAGGAGAAACAGCTGCAAGATCAGATGGTGGTGGAGGGGAATAATAATGGAGGATCGTCAAAAGGGGGATTGGTTTGTGGGAGGCAAAGCAGCAGCCGGTGGACACCCACAAGCGACCAAATAAGGATTCTGAAGGAGCTTTATTACAACAATGGAGTTAGGTCCCCGAGTGCGGATCAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTACGGCAAAATTGAAGGCAAGAACGTCTTTTATTGGTTTCAGAACCACAAGGCTCGCGAAAGACAGAAGAAAAGATTCACTTCTTCTTCTTCTTCTTCCAATTCCAATTCCAATTCCAATTCTGATCATCATCACCATCTCATCACCATTCCTCCACTCCCTAAACAATCATCCAATATTATGTCTCCTCCTCCTCTTCCTCCAGGTTAACATTTTCAAAACTATATCAATTAATTCTCTCTTCTCTTCTCTTCTTCCTAATTATTAATTACTAATTTCTCTTTTTGCAGCTCCCTCTTCTTCGGTTATGCTTGCGGTCGGCCATATGGGCCACTACGGATCATATGCCTCTGCCACTGTGGAGAACAGTTTCAGAGTAATTTTCTAAACTCAATTTTGTTTTTTTTAATTCACCCACCAGACCGATTCTTAATCTTTTAATTTGCCCTTTGACGTAATCCCATCTGCACAAGTATTTGTACTGAGTGTGGTTTATTCATCGTAAGAGATCTTGTATTTGAATCCCGGCATACTATTGGGTTTTGAGTAGTGGTTTATTTATTGTTCAGGATTGTTCGATATCGTCGGGAGGAAGCAGTGGGTTGATGGGGTCTCGAATGGGGTGGATGAGCGTGGATCCTTATTCTGCACAGGCGGCGAGTGGGTTCTTTGAGAAGACGAAATCGGTGGAGGAATCCATGGAAGACGGCGGCGGCCAAGAGATCGAAACGCTCCCCCTTTTTCCCATCCACGGCGACCGGAATCTTGGCGCCTTCTGCAGCATGAAGCCGGAATATTCCGACGGCTACTACGCCACCGCTTGGTACGGCCGCCCCGACGACGCCGCCGCCGCTTCCCGGGCTTCGCTCGAGCTCAGCCTCAACTCTTACGCCGCCATCTCACCGGATGATGCAATCTGA

mRNA sequence

ATGGATCAGCAGGAGAAACAGCTGCAAGATCAGATGGTGGTGGAGGGGAATAATAATGGAGGATCGTCAAAAGGGGGATTGGTTTGTGGGAGGCAAAGCAGCAGCCGGTGGACACCCACAAGCGACCAAATAAGGATTCTGAAGGAGCTTTATTACAACAATGGAGTTAGGTCCCCGAGTGCGGATCAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTACGGCAAAATTGAAGGCAAGAACGATTGTTCGATATCGTCGGGAGGAAGCAGTGGGTTGATGGGGTCTCGAATGGGGTGGATGAGCGTGGATCCTTATTCTGCACAGGCGGCGAGTGGGTTCTTTGAGAAGACGAAATCGGTGGAGGAATCCATGGAAGACGGCGGCGGCCAAGAGATCGAAACGCTCCCCCTTTTTCCCATCCACGGCGACCGGAATCTTGGCGCCTTCTGCAGCATGAAGCCGGAATATTCCGACGGCTACTACGCCACCGCTTGGTACGGCCGCCCCGACGACGCCGCCGCCGCTTCCCGGGCTTCGCTCGAGCTCAGCCTCAACTCTTACGCCGCCATCTCACCGGATGATGCAATCTGA

Coding sequence (CDS)

ATGGATCAGCAGGAGAAACAGCTGCAAGATCAGATGGTGGTGGAGGGGAATAATAATGGAGGATCGTCAAAAGGGGGATTGGTTTGTGGGAGGCAAAGCAGCAGCCGGTGGACACCCACAAGCGACCAAATAAGGATTCTGAAGGAGCTTTATTACAACAATGGAGTTAGGTCCCCGAGTGCGGATCAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTACGGCAAAATTGAAGGCAAGAACGATTGTTCGATATCGTCGGGAGGAAGCAGTGGGTTGATGGGGTCTCGAATGGGGTGGATGAGCGTGGATCCTTATTCTGCACAGGCGGCGAGTGGGTTCTTTGAGAAGACGAAATCGGTGGAGGAATCCATGGAAGACGGCGGCGGCCAAGAGATCGAAACGCTCCCCCTTTTTCCCATCCACGGCGACCGGAATCTTGGCGCCTTCTGCAGCATGAAGCCGGAATATTCCGACGGCTACTACGCCACCGCTTGGTACGGCCGCCCCGACGACGCCGCCGCCGCTTCCCGGGCTTCGCTCGAGCTCAGCCTCAACTCTTACGCCGCCATCTCACCGGATGATGCAATCTGA

Protein sequence

MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKNDCSISSGGSSGLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFCSMKPEYSDGYYATAWYGRPDDAAAASRASLELSLNSYAAISPDDAI

Homology

[Close]

BLAST of Moc01g28980 vs. NCBI nr
Match: XP_022132664.1 (protein WUSCHEL [Momordica charantia])

HSP 1 Score: 355.1 bits (910), Expect = 3.8e-94
Identity = 197/286 (68.88%), Postives = 197/286 (68.88%), Query Frame = 0


Query: 1   MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS 60
           MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS
Sbjct: 1   MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS 60

Query: 61  ADQIQRISARLRQYGKIEGKN--------------------------------------- 120
           ADQIQRISARLRQYGKIEGKN                                       
Sbjct: 61  ADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSSSSNSNSNSNSDHHHHL 120

Query: 121 --------------------------------------------------DCSISSGGSS 180
                                                             DCSISSGGSS
Sbjct: 121 ITIPPLPKQSSNIMSPPPLPPAPSSSVMLAVGHMGHYGSYASATVENSFRDCSISSGGSS 180

Query: 181 GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC 198
           GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC
Sbjct: 181 GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC 240

[Close]

BLAST of Moc01g28980 vs. NCBI nr
Match: XP_016899188.1 (PREDICTED: protein WUSCHEL [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 8.0e-60
Identity = 145/229 (63.32%), Postives = 163/229 (71.18%), Query Frame = 0


Query: 3   QQEKQLQDQMVVE--GNNNGGSS-KGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSP 62
           QQ++Q Q+Q + +  G   GGS+ K G +C RQSSSRWTPT+DQIRILKELYYNNGVRSP
Sbjct: 8   QQQQQQQEQGIHDQGGEGGGGSNGKSGFLC-RQSSSRWTPTTDQIRILKELYYNNGVRSP 67

Query: 63  SADQIQRISARLRQ------------------YGKIEGKN---DCSISSGGSSGLMGSR- 122
           SADQIQRISARLRQ                  YG    +N   +CSISSGG+S ++G R 
Sbjct: 68  SADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRS 127

Query: 123 --MG-WMSVDPYSAQAASG----FFEKTKSVEESMEDG-GGQEIETLPLFPIHGDR-NLG 182
             MG W+ +DPYS+ AA G     FEKTK VEESMED    QEIETLPLFPIHGDR NLG
Sbjct: 128 HNMGSWIGIDPYSSAAAGGSANNVFEKTKYVEESMEDDHEEQEIETLPLFPIHGDRNNLG 187

Query: 183 AFCSMKPEYSDGYYATAWYGRPDDAAAASRASLELSLNSYAAISPDDAI 198
            FCSMKPEYS+ YY T WYGR DD AA SRASLELSLNSYA ISPDD +
Sbjct: 188 GFCSMKPEYSESYYTTTWYGRSDDGAAGSRASLELSLNSYATISPDDGM 235

[Close]

BLAST of Moc01g28980 vs. NCBI nr
Match: KAE8647606.1 (hypothetical protein Csa_003874 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 5.2e-59
Identity = 145/229 (63.32%), Postives = 161/229 (70.31%), Query Frame = 0


Query: 3   QQEKQLQDQMVVEGNNNGGSS-KGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSA 62
           QQE+ + DQ    G   GGS+ KGG +C RQSSSRWTPT+DQIRILKELYYNNGVRSPSA
Sbjct: 9   QQEQGINDQ---GGEGGGGSNGKGGFLC-RQSSSRWTPTTDQIRILKELYYNNGVRSPSA 68

Query: 63  DQIQRISARLRQ------------------YGKIEGKN---DCSISSGGSSGLMGSR--- 122
           DQIQRISARLRQ                  YG    +N   +CSISSGG+S ++G R   
Sbjct: 69  DQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRSHN 128

Query: 123 MG-WMSVDPYSAQAA------SGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDR-NLGA 182
           MG W+ +DPYS+ AA      +  FEKTK VEESMED   QEIETLPLFPIHGDR NLG 
Sbjct: 129 MGSWIGIDPYSSPAAAAAGGSANVFEKTKYVEESMEDHEEQEIETLPLFPIHGDRNNLGG 188

Query: 183 FCSMKPEYSDGYYATAWYGRPDD-AAAASRASLELSLNSYAAISPDDAI 198
           FCSMKPEYS+ YY T WYGR DD  AA SRASLELSLNSYA ISPDD +
Sbjct: 189 FCSMKPEYSESYYTTTWYGRSDDNGAAGSRASLELSLNSYATISPDDGM 233

[Close]

BLAST of Moc01g28980 vs. NCBI nr
Match: XP_023003921.1 (protein WUSCHEL [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-58
Identity = 147/285 (51.58%), Postives = 159/285 (55.79%), Query Frame = 0


Query: 15  EGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQY 74
           +GN  G + KGG VC RQSS+RWTPT+DQIRILKELYYNNGVRSPSADQIQRISARLRQY
Sbjct: 9   QGNEEGSNGKGGFVC-RQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 68

Query: 75  GKIEGKN----------------------------------------------------- 134
           GKIEGKN                                                     
Sbjct: 69  GKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQIPVPKQQQQQQLQSSLVSSKPE 128

Query: 135 ------------------------------------------DCSISSGGSSGLMGSR-- 194
                                                     +CSISSGGSS ++GSR  
Sbjct: 129 DSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGSRRS 188

Query: 195 --MG-WMSVDPYS--AQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFCS 198
             MG W+ VDPYS  A AA+  FEKTK VEESME+   QEIETLPLFPIH DR+LG FCS
Sbjct: 189 HHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEE-EEQEIETLPLFPIHDDRSLGGFCS 248

[Close]

BLAST of Moc01g28980 vs. NCBI nr
Match: XP_022926877.1 (protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234.6 bits (597), Expect = 7.5e-58
Identity = 147/288 (51.04%), Postives = 159/288 (55.21%), Query Frame = 0


Query: 15  EGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQY 74
           +G+  G + KGG VC RQSS+RWTPT+DQIRILKELYYNNGVRSPSADQIQRISARLRQY
Sbjct: 9   QGSEEGSNGKGGFVC-RQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 68

Query: 75  GKIEGKN----------------------------------------------------- 134
           GKIEGKN                                                     
Sbjct: 69  GKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQLQSSLISS 128

Query: 135 ---------------------------------------------DCSISSGGSSGLMGS 194
                                                        +CSISSGGSS ++GS
Sbjct: 129 KPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGS 188

Query: 195 R----MG-WMSVDPYS--AQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGA 198
           R    MG W+ VDPYS  A AA+  FEKTK VEESMED   QEIETLPLFPIH DR+LG 
Sbjct: 189 RRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMED-EEQEIETLPLFPIHDDRSLGG 248

[Close]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot
Match: Q8LL11 (Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.6e-33
Identity = 106/285 (37.19%), Postives = 131/285 (45.96%), Query Frame = 0


Query: 9   QDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRIS 68
           Q   + +G+N   SS    +C RQ+S+RWTPT+DQIRILK+LYYNNGVRSP+A+QIQRIS
Sbjct: 23  QGTNIEDGSNKNNSS--NFMC-RQNSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRIS 82

Query: 69  ARLRQYGKIEGKN----------------------------------------------- 128
           A+LRQYGKIEGKN                                               
Sbjct: 83  AKLRQYGKIEGKNVFYWFQNHKARERQKKRLIAAATTDNTNLPMQMQFQRGVWRSSADDP 142

Query: 129 -----------------------------------------DCSISSGGS-SGLMGSRMG 188
                                                    DCSIS G S S        
Sbjct: 143 IHHKYTNPGVHCPSASSHGVLAVGQNGNHGYGALAMEKSFRDCSISPGSSMSHHHHQNFA 202

[Close]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot
Match: Q6YBV1 (Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.1e-23
Identity = 91/283 (32.16%), Postives = 120/283 (42.40%), Query Frame = 0


Query: 3   QQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSAD 62
           QQ  + QD   + G  N GS     +C RQSS+RWTPT+DQIRILK+LYYNNGVRSP+A+
Sbjct: 9   QQGNEQQDSQGI-GKINNGSGGSSFLC-RQSSTRWTPTTDQIRILKDLYYNNGVRSPTAE 68

Query: 63  QIQRISARLRQYGKIEGKN----------------------------------------- 122
           QIQRISA+LRQYGKIEGKN                                         
Sbjct: 69  QIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKKRFTADHHHHMNVPTIHNHHYKPPPV 128

Query: 123 ---------------------------------------------DCSISS---GGSSGL 182
                                                        +C+ISS       G 
Sbjct: 129 YNKFSNMNSGSFPSSSNGSPGFLTTPGSHVGNYGYGSVAMEKSFRECTISSTTDANVGGS 188

Query: 183 MGSRMGWMSV-----DPYS---AQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDR 189
           M   + W+ +     +PY+    +     +++T  +EE  E+    EIETLPLFP+H D 
Sbjct: 189 MSQNIAWIGINNEYHNPYTFIDTRKYMNGYDQTLEIEEEAEENYTAEIETLPLFPMHAD- 248

[Close]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot
Match: Q84VT7 (Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-21
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 18 NNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKI 77
          + G +S    +C RQSSSRWTPTSDQIRILK+LYYNNGVRSP+A+QIQRISA+LRQYGKI
Sbjct: 9  DGGKNSNNSFLC-RQSSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKI 68

Query: 78 EGKN 82
          EGKN
Sbjct: 69 EGKN 71

[Close]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot
Match: Q9SB92 (Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 17 NNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGK 76
          NNN  S  GG  C RQ+S+RWTPT++QI+ILKELYYNN +RSP+ADQIQ+I+ARLRQ+GK
Sbjct: 20 NNNNKSGSGGYTC-RQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGK 79

Query: 77 IEGKN 82
          IEGKN
Sbjct: 80 IEGKN 83

[Close]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot
Match: Q7XM13 (WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-16
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS 60
          MD  ++Q Q Q V  G     + +GG+   R S +RWTPT++QI+IL+ELYY+ G+RSP+
Sbjct: 1  MDHMQQQ-QRQQVGGGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSCGIRSPN 60

Query: 61 ADQIQRISARLRQYGKIEGKN 82
          ++QIQRI+A LRQYG+IEGKN
Sbjct: 61 SEQIQRIAAMLRQYGRIEGKN 80

[Close]

BLAST of Moc01g28980 vs. ExPASy TrEMBL
Match: A0A6J1BTR4 (protein WUSCHEL OS=Momordica charantia OX=3673 GN=LOC111005468 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.8e-94
Identity = 197/286 (68.88%), Postives = 197/286 (68.88%), Query Frame = 0


Query: 1   MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS 60
           MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS
Sbjct: 1   MDQQEKQLQDQMVVEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPS 60

Query: 61  ADQIQRISARLRQYGKIEGKN--------------------------------------- 120
           ADQIQRISARLRQYGKIEGKN                                       
Sbjct: 61  ADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSSSSSSNSNSNSNSDHHHHL 120

Query: 121 --------------------------------------------------DCSISSGGSS 180
                                                             DCSISSGGSS
Sbjct: 121 ITIPPLPKQSSNIMSPPPLPPAPSSSVMLAVGHMGHYGSYASATVENSFRDCSISSGGSS 180

Query: 181 GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC 198
           GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC
Sbjct: 181 GLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFC 240

[Close]

BLAST of Moc01g28980 vs. ExPASy TrEMBL
Match: A0A1S4DTA3 (protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.9e-60
Identity = 145/229 (63.32%), Postives = 163/229 (71.18%), Query Frame = 0


Query: 3   QQEKQLQDQMVVE--GNNNGGSS-KGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSP 62
           QQ++Q Q+Q + +  G   GGS+ K G +C RQSSSRWTPT+DQIRILKELYYNNGVRSP
Sbjct: 8   QQQQQQQEQGIHDQGGEGGGGSNGKSGFLC-RQSSSRWTPTTDQIRILKELYYNNGVRSP 67

Query: 63  SADQIQRISARLRQ------------------YGKIEGKN---DCSISSGGSSGLMGSR- 122
           SADQIQRISARLRQ                  YG    +N   +CSISSGG+S ++G R 
Sbjct: 68  SADQIQRISARLRQYAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGGNSSVVGYRS 127

Query: 123 --MG-WMSVDPYSAQAASG----FFEKTKSVEESMEDG-GGQEIETLPLFPIHGDR-NLG 182
             MG W+ +DPYS+ AA G     FEKTK VEESMED    QEIETLPLFPIHGDR NLG
Sbjct: 128 HNMGSWIGIDPYSSAAAGGSANNVFEKTKYVEESMEDDHEEQEIETLPLFPIHGDRNNLG 187

Query: 183 AFCSMKPEYSDGYYATAWYGRPDDAAAASRASLELSLNSYAAISPDDAI 198
            FCSMKPEYS+ YY T WYGR DD AA SRASLELSLNSYA ISPDD +
Sbjct: 188 GFCSMKPEYSESYYTTTWYGRSDDGAAGSRASLELSLNSYATISPDDGM 235

[Close]

BLAST of Moc01g28980 vs. ExPASy TrEMBL
Match: A0A6J1KQL8 (protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 147/285 (51.58%), Postives = 159/285 (55.79%), Query Frame = 0


Query: 15  EGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQY 74
           +GN  G + KGG VC RQSS+RWTPT+DQIRILKELYYNNGVRSPSADQIQRISARLRQY
Sbjct: 9   QGNEEGSNGKGGFVC-RQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 68

Query: 75  GKIEGKN----------------------------------------------------- 134
           GKIEGKN                                                     
Sbjct: 69  GKIEGKNVFYWFQNHKARERQKKRFTSSASDHHHHHQQIPVPKQQQQQQLQSSLVSSKPE 128

Query: 135 ------------------------------------------DCSISSGGSSGLMGSR-- 194
                                                     +CSISSGGSS ++GSR  
Sbjct: 129 DSSSSPLFHTKCPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGSRRS 188

Query: 195 --MG-WMSVDPYS--AQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGAFCS 198
             MG W+ VDPYS  A AA+  FEKTK VEESME+   QEIETLPLFPIH DR+LG FCS
Sbjct: 189 HHMGSWIGVDPYSSPASAAATVFEKTKYVEESMEE-EEQEIETLPLFPIHDDRSLGGFCS 248

[Close]

BLAST of Moc01g28980 vs. ExPASy TrEMBL
Match: A0A6J1EFK3 (protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.6e-58
Identity = 147/288 (51.04%), Postives = 159/288 (55.21%), Query Frame = 0


Query: 15  EGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQY 74
           +G+  G + KGG VC RQSS+RWTPT+DQIRILKELYYNNGVRSPSADQIQRISARLRQY
Sbjct: 9   QGSEEGSNGKGGFVC-RQSSTRWTPTTDQIRILKELYYNNGVRSPSADQIQRISARLRQY 68

Query: 75  GKIEGKN----------------------------------------------------- 134
           GKIEGKN                                                     
Sbjct: 69  GKIEGKNVFYWFQNHKARERQKKRFTSSASDHLHHHHQQQQIPVPKQQQQQQLQSSLISS 128

Query: 135 ---------------------------------------------DCSISSGGSSGLMGS 194
                                                        +CSISSGGSS ++GS
Sbjct: 129 KPEDSSSSPLFHTKYPPTPSSSVMVAVGHMGNYGYGSTTFENSFRECSISSGGSSSMVGS 188

Query: 195 R----MG-WMSVDPYS--AQAASGFFEKTKSVEESMEDGGGQEIETLPLFPIHGDRNLGA 198
           R    MG W+ VDPYS  A AA+  FEKTK VEESMED   QEIETLPLFPIH DR+LG 
Sbjct: 189 RRSHHMGSWIGVDPYSSPASAAATVFEKTKYVEESMED-EEQEIETLPLFPIHDDRSLGG 248

[Close]

BLAST of Moc01g28980 vs. ExPASy TrEMBL
Match: A0A5A7SHQ2 (Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001370 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.9e-57
Identity = 150/298 (50.34%), Postives = 167/298 (56.04%), Query Frame = 0


Query: 3   QQEKQLQDQMVVE--GNNNGGSS-KGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSP 62
           QQ++Q Q+Q + +  G   GGS+ K G +C RQSSSRWTPT+DQIRILKELYYNNGVRSP
Sbjct: 7   QQQQQQQEQGIHDQGGEGGGGSNGKSGFLC-RQSSSRWTPTTDQIRILKELYYNNGVRSP 66

Query: 63  SADQIQRISARLRQYGKIEGKN-------------------------------------- 122
           SADQIQRISARLRQYGKIEGKN                                      
Sbjct: 67  SADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSNSNSPITTTTTTTDHFKI 126

Query: 123 ----------------------------------------------------DCSISSGG 182
                                                               +CSISSGG
Sbjct: 127 SSTNNNINWKSEDHSSSSHNKFPPAPSSSVMVAVGHMGNYGYGSATFENSFRECSISSGG 186

Query: 183 SSGLMGSR---MG-WMSVDPYSAQAASG----FFEKTKSVEESMEDG-GGQEIETLPLFP 198
           +S ++G R   MG W+ +DPYS+ AA G     FEKTK VEESMED    QEIETLPLFP
Sbjct: 187 NSSVVGYRSHNMGSWIGIDPYSSAAAGGSANNVFEKTKYVEESMEDDHEEQEIETLPLFP 246

[Close]

BLAST of Moc01g28980 vs. TAIR 10
Match: AT2G17950.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 9.2e-22
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 17 NNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGK 76
          NNN  S  GG  C RQ+S+RWTPT++QI+ILKELYYNN +RSP+ADQIQ+I+ARLRQ+GK
Sbjct: 20 NNNNKSGSGGYTC-RQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGK 79

Query: 77 IEGKN 82
          IEGKN
Sbjct: 80 IEGKN 83

[Close]

BLAST of Moc01g28980 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 34  SSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKN 82
           SSRW PT DQ+R+L+EL Y  G R+PSAD IQ+I+A+LR+YGKIEGKN
Sbjct: 74  SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRYGKIEGKN 120

[Close]

BLAST of Moc01g28980 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0


Query: 30 GRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGKIEGKN 82
          G  SSSRW PT DQI +L+ L Y  G+R+PSADQIQ+I+ RLR YG IEGKN
Sbjct: 8  GTASSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAYGHIEGKN 58

[Close]

BLAST of Moc01g28980 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 17 NNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQYGK 76
          NNN G    G  CG     RW PT +Q+++L +L +  G+R+PS DQIQ+IS  L  YGK
Sbjct: 15 NNNNGGGGTGAKCG-----RWNPTVEQVKLLTDL-FKAGLRTPSTDQIQKISMELSFYGK 73

Query: 77 IEGKN 82
          IE KN
Sbjct: 75 IESKN 73

[Close]

BLAST of Moc01g28980 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10
Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 14  VEGNNNGGSSKGGLVCGRQSSSRWTPTSDQIRILKELYYNNGVRSPSADQIQRISARLRQ 73
           + GNNNGG+   G  CG     RW PT +Q++IL +L +  G+R+P+ DQIQ+IS  L  
Sbjct: 10  LRGNNNGGT---GTKCG-----RWNPTVEQLKILTDL-FRAGLRTPTTDQIQKISTELSF 69

Query: 74  YGKIEGKNDCS-ISSGGSSGLMGSRMGWMSVDPYSAQAASGFFEKTKSVEESMEDGGGQE 133
           YGKIE KN      +  +      R   +  D +  Q +      T+ V E  E+   +E
Sbjct: 70  YGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQPS------TRDVFEISEEDCQEE 127

Query: 134 ---IETLPLFPIH 143
              IETL LFP++
Sbjct: 130 EKVIETLQLFPVN 127

The following BLAST results are available for this feature:

BLAST of Moc01g28980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132664.1	3.8e-94	68.88	protein WUSCHEL [Momordica charantia]	[more]
XP_016899188.1	8.0e-60	63.32	PREDICTED: protein WUSCHEL [Cucumis melo]	[more]
KAE8647606.1	5.2e-59	63.32	hypothetical protein Csa_003874 [Cucumis sativus]	[more]
XP_023003921.1	2.6e-58	51.58	protein WUSCHEL [Cucurbita maxima]	[more]
XP_022926877.1	7.5e-58	51.04	protein WUSCHEL-like [Cucurbita moschata] >KAG6594778.1 Protein WUSCHEL, partial...	[more]

BLAST of Moc01g28980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LL11	8.6e-33	37.19	Protein WUSCHEL OS=Petunia hybrida OX=4102 GN=WUS PE=2 SV=1	[more]
Q6YBV1	8.1e-23	32.16	Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1	[more]
Q84VT7	5.8e-21	78.13	Protein WUSCHEL OS=Solanum lycopersicum OX=4081 GN=WUS PE=2 SV=1	[more]
Q9SB92	1.3e-20	72.31	Protein WUSCHEL OS=Arabidopsis thaliana OX=3702 GN=WUS PE=1 SV=2	[more]
Q7XM13	2.5e-16	54.32	WUSCHEL-related homeobox 1 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX1 PE=1...	[more]

BLAST of Moc01g28980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BTR4	1.8e-94	68.88	protein WUSCHEL OS=Momordica charantia OX=3673 GN=LOC111005468 PE=3 SV=1	[more]
A0A1S4DTA3	3.9e-60	63.32	protein WUSCHEL OS=Cucumis melo OX=3656 GN=LOC103485357 PE=4 SV=1	[more]
A0A6J1KQL8	1.2e-58	51.58	protein WUSCHEL OS=Cucurbita maxima OX=3661 GN=LOC111497366 PE=3 SV=1	[more]
A0A6J1EFK3	3.6e-58	51.04	protein WUSCHEL-like OS=Cucurbita moschata OX=3662 GN=LOC111433860 PE=3 SV=1	[more]
A0A5A7SHQ2	8.9e-57	50.34	Protein WUSCHEL OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0013...	[more]

BLAST of Moc01g28980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17950.1	9.2e-22	72.31	Homeodomain-like superfamily protein	[more]
AT3G18010.1	1.0e-12	68.75	WUSCHEL related homeobox 1	[more]
AT5G59340.1	1.7e-12	65.38	WUSCHEL related homeobox 2	[more]
AT5G05770.1	6.2e-10	49.23	WUSCHEL related homeobox 7	[more]
AT3G11260.1	8.1e-10	36.84	WUSCHEL related homeobox 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 35..76 e-value: 5.1E-7 score: 29.4
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 36..71 e-value: 0.00810649 score: 31.8301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 82..190
None	No IPR available	PANTHER	PTHR45940:SF2	PROTEIN WUSCHEL	coord: 3..81
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 3..81
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 82..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g28980.1	Moc01g28980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity