Moc01g28950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g28950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Zinc finger protein
Location	chr1: 20568772 .. 20572456 (+)
RNA-Seq Expression	Moc01g28950
Synteny	Moc01g28950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAGGGAAGGAGGGGATGGAAGCAAAAGCTTCGTTACAAGTAGCTATGGCCGAAGGAAAGGAAGGCGATTGGGAGTGCAGCGGCTGCAAGAACAGGAACTACGCTTTCCGATCGTTCTGTAACAGATGCAAACAGCCTCGCCTTCTCGTCGACAACAAAACCCCTCCGGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTAGCTTTCTATGATAACCGACTCTGCAGTTCTTCCTTTGCCGTTTTTACAACCTGCAATTTATGTTGTATACTCGAATTTTGTTTTGTTGGATTTTCTCGCTGAACTTAAAATTCAGAGCTACGTCATATGAGTGTTTAAGATTTCGTAGTTCATTTCTGTTTCTGTCACGTGGTATGCAAATCTTGGTTAGAGGATTTCGGGGTTTCTCTTTTTAACATCTAACTGGAGGAAAATTATCGAGTTATTTTTTGAGCGATTAAGGTCTCGTGCTGTGAAATTTTAGTTTTCCAGCTCAATGAAATCAGCTGATGGTTCTTGAAATTTCCAATTGAGCTCCATTTAACTTCTTCAAGATCATATTGAGTTATCCTACAACGAAAATTTTGGAAAGTTTCACAAGAAAGGGGCTTACCACCATTGAAGTTTTCATTAGATACTAATCAAAATAGCTTTGGTTAAGTTGTTCTCCTTTTTTTTTTTTCTTTTTTTCAGTTAGAGTGGTGTGTTATTACATTGAAAGTATATGAAGGTAGCAGGGAGAATGTTTTGTTCATTGGTTAGACATTCACTGAACGTTAAATTGGAGGAACCTCCATTGCATCTTAATCACTAATTCAAGATTTTCTTTGAGGATTGTTTTGCTGCCTGCCCTGTTCACTAATGTTTATATTCCAGCAGACTCGTGTTTTTAGGAAAATGCTAAATTAGGTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATTTGGTGTGGATGGACTGCTTGGTGTGCGTATACTTGGCTTGCTTTGCCTGGATGCTTGTGGGTTGGGTTTGTCTGGCTGTGGTGCAATAGGTTGCACTAACAACAATTATGCATCACGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCGGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGGCTGAATACAAAGATGAATCTTGGATTAATAGGAAATGGAACTTCACAGCAACCGCATCCGTTGAGCTCCAACTGGCCCCTGGGAGGCGTTGATAAGTATGGAATTCATGCAGCTCAAACATTTCCTTTGGGTGGAAATAACTCTGCAATCTCATATATGAGCTCCACTAATCAGATCCTTTTAGTTCCGAAGGGTTGGCGAAATGGTGACTGGATATGTAACTGTGGCTTCCATAATTACTCTTCACGTGCGCAGGTGGGATTTCAACCTCCTTTCACACGCTGAGCTTGAAAGTCATTATTCGTCTTTTCCTATTGATGACTTCTTTGTATTTAATTTCCCATATTTGTTTCCATCTTATTTTTGTCTAACTAAACTTTTTCTTATTTGTAGTGCAAAAAATGCAATGCTTCACCTCAAGGTACATGCAACTCAGTCTCTCTAGGTTTTGATCCAACTAGTACTTTTTAATACTTTAAAAGACATAATGATATAGCTATTTTATAGATTATACATGTTATAATGAGATAGTTATGGACATCAAAACGAGCATAGGTTAGCAGTAATTGACATGTATCTCTAACCAAAAGGTTATGAGTTTGATCCCCCACCTCCACACGTTTGTACAAAAAAAAAGAGATAGTTATGGACGTATGGTGTCCTGTGCGCAAAAGTCTTTCTATTGTTTCAGTTATGTGTGTTTGTCTTTTTTGTTATCAGTTGACCGACTAGGTTCACATTTTTGAATTTGGAGTAGTAATGTTCGATAGAAGGAAATTTTAGTGGAGTAGAAAAGCTCAGTTTTATGGAAAATATTAGAACTACCTCCACAGTTTCTCTTTTGCATAGAGTAGGGATGGGGTGGCTGTTCTGGTATCTTTGGTGTATCAGCTGAGATAAAGAAGTAAATGGAGTTAAACTTGATTAGAATTCTTTTTCTACTTGAAGTTGAGCCACCGTCCTGGAAGATTAGACTCACCCTTTTTTTGTTTTGGACTGTGTAGCACTTGGAATGAAACGCTTAGCATCCGAAGAGCTTGTTCATCCCTGGGATAGCAAAAGATTAAATATAGGACAGGTATCCCCCTGGCAGAAATACAGATGATAAATAATTGATATTATTGAAAATTTTGTTGTTAAAATTTTGTGAAACTGATCACTGGCTTCTCCTCTTTATTTTCTTGGCATTCAGACAAACGAGCAACAGCAATCTTACCCAGGTTTTGAGCAGATTGTAAGTTCCAGTAGTGACCTAAATGTGGGATTGTATAATTCCTATTCCCACGAAAGTTCTGGCGTGGCCCCAAATTTGGAAATGGTGATGAACTTTCCCCAACAATCAACTGCGCCAACACTCCTAGGAAAAGGGTAATATATAGGTGCATTAGCTAGCTGCCATTTTATTCTTTCCTACCATCAAAATGATATGATAATTAACCCTAAATTCTTGGCCAAATTGCTTTGCTGGGAAGACTTGTGATGCCATGAATTATAGTTTATACTGTTTGTTATCGTGCACTTTTTTATTAGCAAGTTATGAAAAACTTATATGCTATTTATATGGCCCAGCTTCAGTAAACAGATTGTGCACGTGCATAGACAAATTGTTGGTTTTGTGGAGTACTTGTGTACTGAACTCCCACTGATGATTAATTGTAACTTGTATGGTACATATGTACAGCTATATCTGGTTTTGCATGGAAGAACCACCTGCATGTTAGTTGATTACGAACCCTTTTACTGATTGTGTTAAAACTTTCTTACGCTATGCAATCTACAGTGCAAAACAGTGGCGCAATGGAGATTGGATGTGCACAAATTGCAATAATCATAACTATGCCTCTCGCTTACAATGTAACAGGTTATCATCTAAAACTAGTTTCCCCTACATTTATGTTGGATGTGATATGTGCTGTATATTCTATGGTCGTTGATCTTATGACCTTTAGATCTCACAACTCGTCACTTCACAAGTTCTTATTGATGTTGTTGGAAAAATTTTCTGAATTCTTTTTTTTGGAAAAGAAACAGATTTCATTAATGTAATGAAATGGTAAAAGAAACAAAAGGGGAAGATCCCAAACCAAGGGAGTTACAAAAAGGCTCTCCAATTGGTTAAAAGAGAAACAAAGCTATAGTGTTTAAAGATAGGAGAACATTTACACCAAGATACAACCATAGACACTATAGCTTCAAAAATGATGCCAACGGACAATCCTTTCCTAAGAAGATCCGGCGATTCCTTTCTAACCATGTCGACCAGAGCAGCGCCCTAACAAAATGCTTCCGTAGGATTCTGCTTCACTGGTGAAAGGGTGCTCCAAAATTTTCTGAATTCTATGTTCTTGTGTTTGTTAGTTTAGTAGGTTTGTTGCATCTTAAATGACATTGCATTATTGAACCTCCAACATTGAAATGCTTTTGTTTCTGTAACAGGTGCAAGACTCAAAGGGATTCACTTTCTCTACCACTCAGTGCCATTTAG

mRNA sequence

ATGGATGGAGGGAAGGAGGGGATGGAAGCAAAAGCTTCGTTACAAGTAGCTATGGCCGAAGGAAAGGAAGGCGATTGGGAGTGCAGCGGCTGCAAGAACAGGAACTACGCTTTCCGATCGTTCTGTAACAGATGCAAACAGCCTCGCCTTCTCGTCGACAACAAAACCCCTCCGGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCACGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCGGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGGCTGAATACAAAGATGAATCTTGGATTAATAGGAAATGGAACTTCACAGCAACCGCATCCGTTGAGCTCCAACTGGCCCCTGGGAGGCGTTGATAAGTATGGAATTCATGCAGCTCAAACATTTCCTTTGGGTGGAAATAACTCTGCAATCTCATATATGAGCTCCACTAATCAGATCCTTTTAGTTCCGAAGGGTTGGCGAAATGGTGACTGGATATGTAACTGTGGCTTCCATAATTACTCTTCACGTGCGCAGTGCAAAAAATGCAATGCTTCACCTCAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAGCTTGTTCATCCCTGGGATAGCAAAAGATTAAATATAGGACAGACAAACGAGCAACAGCAATCTTACCCAGGTTTTGAGCAGATTGTAAGTTCCAGTAGTGACCTAAATGTGGGATTGTATAATTCCTATTCCCACGAAAGTTCTGGCGTGGCCCCAAATTTGGAAATGGTGATGAACTTTCCCCAACAATCAACTGCGCCAACACTCCTAGGAAAAGGTGCAAAACAGTGGCGCAATGGAGATTGGATGTGCACAAATTGCAATAATCATAACTATGCCTCTCGCTTACAATGTAACAGGTGCAAGACTCAAAGGGATTCACTTTCTCTACCACTCAGTGCCATTTAG

Coding sequence (CDS)

ATGGATGGAGGGAAGGAGGGGATGGAAGCAAAAGCTTCGTTACAAGTAGCTATGGCCGAAGGAAAGGAAGGCGATTGGGAGTGCAGCGGCTGCAAGAACAGGAACTACGCTTTCCGATCGTTCTGTAACAGATGCAAACAGCCTCGCCTTCTCGTCGACAACAAAACCCCTCCGGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCACGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCGGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGGCTGAATACAAAGATGAATCTTGGATTAATAGGAAATGGAACTTCACAGCAACCGCATCCGTTGAGCTCCAACTGGCCCCTGGGAGGCGTTGATAAGTATGGAATTCATGCAGCTCAAACATTTCCTTTGGGTGGAAATAACTCTGCAATCTCATATATGAGCTCCACTAATCAGATCCTTTTAGTTCCGAAGGGTTGGCGAAATGGTGACTGGATATGTAACTGTGGCTTCCATAATTACTCTTCACGTGCGCAGTGCAAAAAATGCAATGCTTCACCTCAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAGCTTGTTCATCCCTGGGATAGCAAAAGATTAAATATAGGACAGACAAACGAGCAACAGCAATCTTACCCAGGTTTTGAGCAGATTGTAAGTTCCAGTAGTGACCTAAATGTGGGATTGTATAATTCCTATTCCCACGAAAGTTCTGGCGTGGCCCCAAATTTGGAAATGGTGATGAACTTTCCCCAACAATCAACTGCGCCAACACTCCTAGGAAAAGGTGCAAAACAGTGGCGCAATGGAGATTGGATGTGCACAAATTGCAATAATCATAACTATGCCTCTCGCTTACAATGTAACAGGTGCAAGACTCAAAGGGATTCACTTTCTCTACCACTCAGTGCCATTTAG

Protein sequence

MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQTNEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI

Homology

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BLAST of Moc01g28950 vs. NCBI nr
Match: XP_022132998.1 (uncharacterized RNA-binding protein C17H9.04c [Momordica charantia])

HSP 1 Score: 724.9 bits (1870), Expect = 3.1e-205
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
           LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 662.1 bits (1707), Expect = 2.5e-186
Identity = 306/340 (90.00%), Postives = 318/340 (93.53%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 659.4 bits (1700), Expect = 1.6e-185
Identity = 305/340 (89.71%), Postives = 317/340 (93.24%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KA+ Q  M EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKAASQQTMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           L++K+NLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPGFEQ++ SSSD NVGLYNSY HESS VAPNLEM M FP Q+TAP LLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMQFPPQATAPALLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 657.1 bits (1694), Expect = 8.0e-185
Identity = 303/340 (89.12%), Postives = 317/340 (93.24%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KAS Q+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           L++KMNLGLIGNGTSQ  HPLSSNW +GG DKYGIHAA TFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPG EQ++ +SSD NVGLYN Y HESS VAPNLEM + FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. NCBI nr
Match: XP_022926922.1 (uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720.1 uncharacterized RNA-binding protein C17H9.04c [Cucurbita pepo subsp. pepo] >KAG6594780.1 hypothetical protein SDJN03_11333, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 641.0 bits (1652), Expect = 6.0e-180
Identity = 306/342 (89.47%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVA-MAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEG+E KA+ QVA M EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQI 180
           GL+TKMNLGL  NG  QQ HPLSSNW LGG DKY IHA+  FPLGGNNSAISYMSS NQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LLVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQ 240
           L VPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQIVSSSSDLNVG-LYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKG 300
           TNEQQQS+PGFEQ+V SSSD NVG LYNSY HESSG+APNLEM M FPQQ+TAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-08
Identity = 45/159 (28.30%), Postives = 61/159 (38.36%), Query Frame = 0


Query: 65  RIGDWIC--TGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLN 124
           R GDW C   GC  +N+A    C +CG  +  AA+ A    G    +YSH          
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSH---------- 504

Query: 125 TKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYG--------IHAAQTF--PLGGNNSAISY 184
                    N  S  P  +S++ P   V  Y          +  Q F    GGN S    
Sbjct: 505 ---------NSYSHIPPVMSTSPPNHSVYPYSQLSINSVTANHGQNFGGQNGGNVSRFDD 564

Query: 185 MSSTNQILLVPKGWRNGDWICNCGFHNYSSRAQCKKCNA 212
                ++         GDW+C CGF N+  R+ C +CNA
Sbjct: 565 HGRFKEVSRPSVTTDQGDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot
Match: P49792 (E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 63/240 (26.25%), Postives = 89/240 (37.08%), Query Frame = 0


Query: 3    GGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRC----KQPRLLVDNKTPP 62
            G  E  +A  S    M   KEG W+CS C  RN A  + C  C    KQ +      TP 
Sbjct: 1587 GTSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPA 1646

Query: 63   DSK------------WLPRIGDWICTGCTNNNYASREKCKKCGQP-KEVAAMPAIAIPGA 122
             S+            +  + G W C+ C   N AS  KC  C  P K+     A++ P +
Sbjct: 1647 SSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQNQTTSAVSTPAS 1706

Query: 123  SFPT------YSHYFARTQGGLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQ 182
            S  +      +   F + +G      ++ L+ N  S                     A Q
Sbjct: 1707 SETSKAPKSGFEGMFTKKEG--QWDCSVCLVRNEASATK----------------CIACQ 1766

Query: 183  TFPLGGNNSAISYMSSTNQILLVPKGW------RNGDWICN-CGFHNYSSRAQCKKCNAS 213
                    +AIS  +S ++I   PK        R G W C+ C   N SS  +C  C+AS
Sbjct: 1767 CPSKQNQTTAISTPAS-SEISKAPKSGFEGMFIRKGQWDCSVCCVQNESSSLKCVACDAS 1807

[Close]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot
Match: H2QII6 (E3 SUMO-protein ligase RanBP2 OS=Pan troglodytes OX=9598 GN=RANBP2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 63/240 (26.25%), Postives = 89/240 (37.08%), Query Frame = 0


Query: 3    GGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRC----KQPRLLVDNKTPP 62
            G  E  +A  S    M   KEG W+CS C  RN A  + C  C    KQ +      TP 
Sbjct: 1587 GTSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCVACQNPGKQNQTTSAVSTPA 1646

Query: 63   DSK------------WLPRIGDWICTGCTNNNYASREKCKKCGQP-KEVAAMPAIAIPGA 122
             S+            +  + G W C+ C   N AS  KC  C  P K+     A++ P +
Sbjct: 1647 SSETSRAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQSPGKQNQTTSAVSTPAS 1706

Query: 123  SFPT------YSHYFARTQGGLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQ 182
            S  +      +   F + +G      ++ L+ N  S                     A Q
Sbjct: 1707 SETSKAPKSGFEGMFTKKEG--QWDCSVCLVRNEASATK----------------CIACQ 1766

Query: 183  TFPLGGNNSAISYMSSTNQILLVPKGW------RNGDWICN-CGFHNYSSRAQCKKCNAS 213
                    +AIS  +S ++I   PK        R G W C+ C   N SS  +C  C+AS
Sbjct: 1767 CPSKQNQTTAISTPAS-SEISKAPKSGFEGMFIRKGQWDCSVCCVQNESSSLKCVACDAS 1807

[Close]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Moc01g28950 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.5e-205
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
           LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.2e-186
Identity = 306/340 (90.00%), Postives = 318/340 (93.53%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPL GNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.9e-185
Identity = 303/340 (89.12%), Postives = 317/340 (93.24%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KAS Q+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180
           L++KMNLGLIGNGTSQ  HPLSSNW +GG DKYGIHAA TFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300
           NEQQQSYPG EQ++ +SSD NVGLYN Y HESS VAPNLEM + FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Moc01g28950 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.9e-180
Identity = 306/342 (89.47%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVA-MAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEG+E KA+ QVA M EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQI 180
           GL+TKMNLGL  NG  QQ HPLSSNW LGG DKY IHA+  FPLGGNNSAISYMSS NQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LLVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQ 240
           L VPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQIVSSSSDLNVG-LYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKG 300
           TNEQQQS+PGFEQ+V SSSD NVG LYNSY HESSG+APNLEM M FPQQ+TAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Moc01g28950 vs. ExPASy TrEMBL
Match: A0A6J1KT42 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC111497358 PE=4 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.2e-179
Identity = 305/342 (89.18%), Postives = 315/342 (92.11%), Query Frame = 0


Query: 1   MDGGKEGMEAKASLQVA-MAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEG+E KA+ QVA M EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQI 180
           GL+TKMNLGL  NG  QQ HPLSSNW LGG DKY IHAA  FPLGGNNSAISYMSS NQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHAAPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LLVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQ 240
           L VPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQIVSSSSDLNVG-LYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKG 300
           TNEQQ S+PGFEQ+V SSSD NVG LYNSY HESSG+AP+LEM M FPQQ+TAPTLLGKG
Sbjct: 241 TNEQQLSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPSLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Moc01g28950 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 350.1 bits (897), Expect = 2.0e-96
Identity = 176/317 (55.52%), Postives = 202/317 (63.72%), Query Frame = 0


Query: 18  MAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNN 77
           M +G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICTGCTNN
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICTGCTNN 60

Query: 78  NYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLNTKMNLGLIGNGTSQQ 137
           NYASREKCKKCGQ KEVAA+ A+AIPGAS  T+ HYF R              G  +  Q
Sbjct: 61  NYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTR--------------GPESHDQ 120

Query: 138 PHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPKGWRNGDWICNCGF 197
           P                             S +++ ++TNQ   V K WR+GDWIC CGF
Sbjct: 121 P----------------------------GSLLAFSNATNQ-ASVHKEWRSGDWICRCGF 180

Query: 198 HNYSSRAQCKKCN-ASPQALGMKRLASEELVHPWDSKRLNIGQTNEQQQSYPGFEQIVSS 257
           HNYSSR QCKKCN  +P ALG KRLASE L H WDSKRLN G T+ Q QS          
Sbjct: 181 HNYSSRIQCKKCNEIAPLALGTKRLASEALAHEWDSKRLNQGYTSMQTQS---------- 240

Query: 258 SSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAKQWRNGDWMCTNCNNHN 317
                  +Y S+   S G   N ++ + F QQ + P LLG G KQWR+GDWMCTNC NHN
Sbjct: 241 ------AIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHN 258

Query: 318 YASRLQCNRCKTQRDSL 334
           YASR +CNRCKT RD L
Sbjct: 301 YASRAECNRCKTTRDIL 258

[Close]

BLAST of Moc01g28950 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-13
Identity = 50/195 (25.64%), Postives = 70/195 (35.90%), Query Frame = 0


Query: 24  GDWECSGCKNRNYAFRSFCNRCKQPRL-LVDNKTPPDSKWLPRIGDWIC--TGCTNNNYA 83
           GDW C  C++ N+  R  C +C  P+   VD  T   ++     GDW C    C ++NYA
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCGSHNYA 65

Query: 84  SREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGGLNTKMNLGLIGNGTSQQPHP 143
           SR  C +CG  K                 Y+  +                          
Sbjct: 66  SRTSCYRCGMIK---------------VEYTEQY-------------------------- 125

Query: 144 LSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPKGWRNGDWIC---NCGF 203
                          + AQ    G + +A             P GW+ GDW+C    CG 
Sbjct: 126 ---------------YGAQMVAYGNDGAA------------CPPGWKTGDWVCPRVGCGV 132

Query: 204 HNYSSRAQCKKCNAS 213
           HNY+SRA+C KC  +
Sbjct: 186 HNYASRAECFKCKTT 132

[Close]

BLAST of Moc01g28950 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-12
Identity = 62/223 (27.80%), Postives = 81/223 (36.32%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 81
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 82  DWICT--GCTNNNYASREKCKKCGQPK-EVAAMPAIAIPGASFPTYSHYFARTQGGLNTK 141
           DW C    C  +N+A+R  C KCG  K E +   A A  G                +N  
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFM-------------DMNVG 122

Query: 142 MNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQILLVPK 201
              GL G G S                            GG  +  S             
Sbjct: 123 PRRGLFGFGGSSS--------------------------GGGGTGRS------------- 167

Query: 202 GWRNGDWIC---NCGFHNYSSRAQCKKCNASPQALGMKRLASE 225
            W++GDWIC    C  HN++SR++C +CNA       K LA+E
Sbjct: 183 PWKSGDWICPRSGCNEHNFASRSECFRCNAP------KELATE 167

[Close]

BLAST of Moc01g28950 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-08
Identity = 27/78 (34.62%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 11  KASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWI 70
           K +  V + E K+GDW C+GC   N+A    C  C++ R           K L   GDW 
Sbjct: 365 KKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRECREQR----------HKTLAEPGDWE 424

Query: 71  CTGCTNNNYASREKCKKC 89
           C  C   N+   + CKKC
Sbjct: 425 CPSCDFVNFRRNDACKKC 432

[Close]

BLAST of Moc01g28950 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-08
Identity = 56/214 (26.17%), Postives = 69/214 (32.24%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR--------LLVDN-----------KTPPDSKW 81
           + GDW C  C + N+  R  C RC   R        L   N            T  D   
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSD--- 62

Query: 82  LPRIGDWICT--GCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 141
             R GDW CT   C  +N+ASR  C KCG                   T+        GG
Sbjct: 63  -VRPGDWYCTVGNCGTHNFASRSTCFKCG-------------------TFKDETGAGGGG 122

Query: 142 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 201
                  G IG         + S  P                  GN    S         
Sbjct: 123 -------GGIGGPAMFDADIMRSRVP------------------GNGGRSS--------- 154

Query: 202 LVPKGWRNGDWIC---NCGFHNYSSRAQCKKCNA 212
                W++GDWIC    C  HN++SR +C +CNA
Sbjct: 183 -----WKSGDWICTRIGCNEHNFASRMECFRCNA 154

The following BLAST results are available for this feature:

BLAST of Moc01g28950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132998.1	3.1e-205	100.00	uncharacterized RNA-binding protein C17H9.04c [Momordica charantia]	[more]
XP_004134868.1	2.5e-186	90.00	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
XP_038883349.1	1.6e-185	89.71	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
XP_008440810.1	8.0e-185	89.12	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]
XP_022926922.1	6.0e-180	89.47	uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720...	[more]

BLAST of Moc01g28950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	2.6e-08	28.30	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
P49792	7.0e-06	26.25	E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2	[more]
H2QII6	7.0e-06	26.25	E3 SUMO-protein ligase RanBP2 OS=Pan troglodytes OX=9598 GN=RANBP2 PE=1 SV=1	[more]
O95218	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	9.1e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of Moc01g28950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXT0	1.5e-205	100.00	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0KGM9	1.2e-186	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A1S3B1J3	3.9e-185	89.12	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1EFP4	2.9e-180	89.47	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KT42	3.2e-179	89.18	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Moc01g28950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	2.0e-96	55.52	zinc finger (Ran-binding) family protein	[more]
AT2G26695.1	4.6e-13	25.64	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	5.1e-12	27.80	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	1.5e-08	34.62	zinc finger (Ran-binding) family protein	[more]
AT3G15680.1	4.5e-08	26.17	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 189..212 e-value: 6.8E-5 score: 32.3 coord: 67..91 e-value: 2.1E-8 score: 43.9 coord: 305..329 e-value: 1.5E-6 score: 37.8 coord: 24..48 e-value: 1.8E-6 score: 37.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 22..49 e-value: 3.7E-7 score: 29.3 coord: 303..330 e-value: 3.8E-7 score: 29.3 coord: 65..93 e-value: 3.0E-7 score: 29.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 26..45
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 307..326
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 69..88
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 65..94 score: 10.116323
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 22..51 score: 9.946939
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 303..332 score: 10.296997
None	No IPR available	GENE3D	4.10.1060.10		coord: 17..50 e-value: 2.8E-9 score: 38.1 coord: 298..332 e-value: 3.4E-10 score: 41.0 coord: 60..94 e-value: 2.8E-10 score: 41.3 coord: 184..214 e-value: 6.9E-8 score: 33.6
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 184..267 coord: 294..338
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 20..155
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 20..155
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 184..267 coord: 294..338
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 185..212
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 297..331
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 22..50
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 59..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g28950.1	Moc01g28950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding