Moc01g26950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g26950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	TPR_REGION domain-containing protein
Location	chr1: 19223602 .. 19224234 (+)
RNA-Seq Expression	Moc01g26950
Synteny	Moc01g26950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCCGGAAGCAATGATACAAGTAGCCCTCTTCATCCTAACAGCAGCGACGTTGTTGGCCGTACGTGAACTTTCCAAACGAGCTTTCGGGAAGGTCCGCCCTAAGAATCGCGCGATTCTCCAGTCGAGCCGCCACTTCTTCGAGGGAACACATCTTCTGGCTCGGGCACGGTCAACCTCTCAACAATCACAATCCTTCGACTACGCGAAGAAAGCACTAACCGAAGCCGAAACGGCGCTCTCCCTTTCCCCCAAAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCATCAGAGCTCCGCGCTTAAATCACTCGACGTCGCACTCTCTCCGCCGTGCTTGAAGTCTCTATCTGGCAGAGAACTCGGGAAGGCGTTGATTAAGCGAGCCGAGTTGAAGATCGCCGTGAATCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTGGAGGCGGTGAGACTGGGCGTACAAGACCCGAAAGGCTTCTGTCTTTTGGGGCAATGTTACGAGTGGAAGCAAATGAAAGACGAGGCCAAGCAGGCTTTCGAAAAGGCCCTAACTGTGGATCCTGAATCCAGCCCGGCCCGTGAGGGATTGGAGCGGTTGAACTGA

mRNA sequence

ATGTCGCCGGAAGCAATGATACAAGTAGCCCTCTTCATCCTAACAGCAGCGACGTTGTTGGCCGTACGTGAACTTTCCAAACGAGCTTTCGGGAAGGTCCGCCCTAAGAATCGCGCGATTCTCCAGTCGAGCCGCCACTTCTTCGAGGGAACACATCTTCTGGCTCGGGCACGGTCAACCTCTCAACAATCACAATCCTTCGACTACGCGAAGAAAGCACTAACCGAAGCCGAAACGGCGCTCTCCCTTTCCCCCAAAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCATCAGAGCTCCGCGCTTAAATCACTCGACGTCGCACTCTCTCCGCCGTGCTTGAAGTCTCTATCTGGCAGAGAACTCGGGAAGGCGTTGATTAAGCGAGCCGAGTTGAAGATCGCCGTGAATCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTGGAGGCGGTGAGACTGGGCGTACAAGACCCGAAAGGCTTCTGTCTTTTGGGGCAATGTTACGAGTGGAAGCAAATGAAAGACGAGGCCAAGCAGGCTTTCGAAAAGGCCCTAACTGTGGATCCTGAATCCAGCCCGGCCCGTGAGGGATTGGAGCGGTTGAACTGA

Coding sequence (CDS)

ATGTCGCCGGAAGCAATGATACAAGTAGCCCTCTTCATCCTAACAGCAGCGACGTTGTTGGCCGTACGTGAACTTTCCAAACGAGCTTTCGGGAAGGTCCGCCCTAAGAATCGCGCGATTCTCCAGTCGAGCCGCCACTTCTTCGAGGGAACACATCTTCTGGCTCGGGCACGGTCAACCTCTCAACAATCACAATCCTTCGACTACGCGAAGAAAGCACTAACCGAAGCCGAAACGGCGCTCTCCCTTTCCCCCAAAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCATCAGAGCTCCGCGCTTAAATCACTCGACGTCGCACTCTCTCCGCCGTGCTTGAAGTCTCTATCTGGCAGAGAACTCGGGAAGGCGTTGATTAAGCGAGCCGAGTTGAAGATCGCCGTGAATCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTGGAGGCGGTGAGACTGGGCGTACAAGACCCGAAAGGCTTCTGTCTTTTGGGGCAATGTTACGAGTGGAAGCAAATGAAAGACGAGGCCAAGCAGGCTTTCGAAAAGGCCCTAACTGTGGATCCTGAATCCAGCCCGGCCCGTGAGGGATTGGAGCGGTTGAACTGA

Protein sequence

MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPESSPAREGLERLN

Homology

[Close]

BLAST of Moc01g26950 vs. NCBI nr
Match: XP_022132455.1 (uncharacterized protein LOC111005306 [Momordica charantia])

HSP 1 Score: 394.8 bits (1013), Expect = 4.6e-106
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEAKQAFEKALTVDPESSPAREGLERLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Moc01g26950 vs. NCBI nr
Match: KAG6604067.1 (hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.2 bits (892), Expect = 4.9e-92
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 48  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 107

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 108 SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 167

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 168 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 227

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 228 MKDEARQAFEKALTVDPESAPAREALGRLN 257

[Close]

BLAST of Moc01g26950 vs. NCBI nr
Match: XP_022950520.1 (uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothetical protein SDJN02_03962, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 348.2 bits (892), Expect = 4.9e-92
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Moc01g26950 vs. NCBI nr
Match: XP_023543662.1 (uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.4 bits (890), Expect = 8.4e-92
Identity = 185/210 (88.10%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           +SPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 2   VSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGHQSSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHQSSALKSLDVALSPPCL 121

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA++AFEKALTVDPES+PARE L RLN
Sbjct: 182 MKDEAREAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Moc01g26950 vs. NCBI nr
Match: XP_022978825.1 (uncharacterized protein LOC111478668 [Cucurbita maxima])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 182/210 (86.67%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEA+IQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 2   MSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSI 61

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKA+ EAETALSLSP+DPASHILKALAL+HMGH SSALKSLD+ALSPPCL
Sbjct: 62  SQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPCL 121

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Moc01g26950 vs. ExPASy TrEMBL
Match: A0A6J1BSI1 (uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005306 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.2e-106
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEAKQAFEKALTVDPESSPAREGLERLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Moc01g26950 vs. ExPASy TrEMBL
Match: A0A6J1GFZ7 (uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC111453603 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.4e-92
Identity = 186/210 (88.57%), Postives = 196/210 (93.33%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARST
Sbjct: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Moc01g26950 vs. ExPASy TrEMBL
Match: A0A6J1IRB2 (uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 182/210 (86.67%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           MSPEA+IQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 2   MSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSI 61

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKA+ EAETALSLSP+DPASHILKALAL+HMGH SSALKSLD+ALSPPCL
Sbjct: 62  SQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPCL 121

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180
           KSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 211
           MKDEA+QAFEKALTVDPES+PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Moc01g26950 vs. ExPASy TrEMBL
Match: A0A5E4EZ55 (PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.0e-62
Identity = 132/212 (62.26%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF +G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
             ++QS  +AK ALTEAE AL+LSP+DP  HILKALALD +GH++SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLG---VQDPKGFCLLGQCYE 180
           KSLS RE G+AL+KRAELKI +NR+RR+DSAVEDL++AVRL      D   FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 181 WKQMKDEAKQAFEKALTVDPESSPAREGLERL 210
           WK MK+EA++AFE+AL  +P S  AR+GL+RL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Moc01g26950 vs. ExPASy TrEMBL
Match: A0A251NVU0 (TPR_REGION domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G203100 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.0e-62
Identity = 132/212 (62.26%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60
           M+PE ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF +G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
             ++QS  +AK ALTEAE AL+LSP+DP  HILKALALD +GH++SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLG---VQDPKGFCLLGQCYE 180
           KSLS RE G+AL+KRAELKI +NR+RR+DSAVEDL++AVRL      D   FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 181 WKQMKDEAKQAFEKALTVDPESSPAREGLERL 210
           WK MK+EA++AFE+AL  +P S  AR+GL+RL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Moc01g26950 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-46
Identity = 105/198 (53.03%), Postives = 141/198 (71.21%), Query Frame = 0


Query: 4   EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQ 63
           E +IQ A+ +LT     A++ LS+R   K R K+RA LQ+ R   + + LLARAR+T ++
Sbjct: 5   ETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPKK 64

Query: 64  SQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCLKSL 123
           SQS   AK ALTEA+  +++SP D A HI++ALALD +GH +SALKS D+AL+ P LKSL
Sbjct: 65  SQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKSL 124

Query: 124 SGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRL--GVQDPKGFCLLGQCYEWKQM 183
           S  E   AL+KRAE+K+AVNR+RR+DSAVEDL EAVRL  G    + F LLG+CYE+K +
Sbjct: 125 SVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKGL 184

Query: 184 KDEAKQAFEKALTVDPES 200
           K++A+ AF +AL   P S
Sbjct: 185 KEKAQWAFNEALKAQPSS 202

The following BLAST results are available for this feature:

BLAST of Moc01g26950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132455.1	4.6e-106	100.00	uncharacterized protein LOC111005306 [Momordica charantia]	[more]
KAG6604067.1	4.9e-92	88.57	hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950520.1	4.9e-92	88.57	uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothet...	[more]
XP_023543662.1	8.4e-92	88.10	uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]	[more]
XP_022978825.1	2.1e-90	86.67	uncharacterized protein LOC111478668 [Cucurbita maxima]	[more]

BLAST of Moc01g26950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g26950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSI1	2.2e-106	100.00	uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GFZ7	2.4e-92	88.57	uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A6J1IRB2	1.0e-90	86.67	uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668...	[more]
A0A5E4EZ55	2.0e-62	62.26	PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1	[more]
A0A251NVU0	2.0e-62	62.26	TPR_REGION domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G203100...	[more]

BLAST of Moc01g26950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	2.6e-46	53.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 166..199 e-value: 2.9E-5 score: 33.5
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 166..199 score: 9.9124
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 131..210 e-value: 2.5E-11 score: 45.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 13..130 e-value: 7.0E-6 score: 27.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..200
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 167..198 e-value: 7.0E-7 score: 28.8
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 4..208
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 4..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g26950.1	Moc01g26950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding