Moc01g25090 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g25090
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	B3 domain-containing transcription factor VRN1-like
Location	chr1: 17779952 .. 17781701 (+)
RNA-Seq Expression	Moc01g25090
Synteny	Moc01g25090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCAAAAAAGTTTGTTCAAGAATATGGGAAGTTTCTGTCAAGTTCCGTACGTCTCAAGCTTCCTGATGGTAAGGAATGGAAAGTGGGCTTAAAGACCGCCACAAACGGTGCCGTTTGGCTGCAAAATGGCTGGCATCCATTTGCAGAGTACTATTGTTTAGAGTTTGGTTCGATGTTGGTTTTTAGACTCGATGGAAATTCGACTTTCCATACATTAATATTCGATGCAACTGGATCAGAGATTGAATATTCTTTCAACTTTAACCATTTTGAAGGAGATTTTAAAGAGGAGAATGATGCTAATTATTCTGATGAAAGTCTGAAGAATTTTTCTCCACATCCAGAAAAGAGGGAGAATGCCTCATTTCCCTGTTGGCAGCCTCATAAGAGGATGAAAAATGAAGCTTCATTTTCCCGCAAAATGGAACCTCAAGGTACCAATATTTTGATTTTTTCAGAGATTTTCCTTTCAAAAAACTTGTTTAAATCCGACCAGAAAAAAATTTGCTTAAGACACATTGAGTTTATGTCTGCAAAAATCTGTGTATCATTAACTGGTGTATCATAATATGCAGATCAAGAATGCTGTATTCTAAGGGAGAAGCCGAGTTGTAAGAGAATCCCAGAAGATGGGGTTTCAAGGAGAAGGCAGCCATTATCATCTACAGCCGAGAATGCTGAAAAACCTCAAAGATTCAGCGGTTCAAAATCAGAGAAACCTGGTTTCAGAATTGTTATAGGAAAATCAAGTCCAGGAGGCAGATTAAAAATGGTATGTTTTCTCTGCTTGATCAAAAACCCCCCATTTCTTTCGTGTTTTTGCTGGAAATAAGCCTTTTTTTTTTCCTTGTAGACCATTCCTAAAGACTTTGCACAAAATTATTTACCCGAAGAGGTTGGAAGAATCAGAATTCAGACTTTAGATGGTGGAAGTTGGTCACTTTTGTACAAATGGAGTCCAAGCCGAGGAGGTTTTGCTTATATTTCAAGAGGGTGGAAGCGCTTTGCAGAGGAAAATCTCTTGAAAAAAGGAGATGTTGGATTCTTTCAAATGATTGAAAAAGATCAATTTTTATTCACCATAGAAGAGACCTCTGCCTCTGCTTCCCATTCGCCAAAGAATAATGCTGCAACTATCAGAAATCCATTCTTTGAAGTTGATGTTTGCTTCAAAAGCTACCAATGTTCGACTCTGGTAAATTCCTTTCCCTTTTTTCACTGCCAAATATCTTCTATTTTGTGTTTGAGTATTGATAGAACTTGTGTTATTCACTTTCGGGTTTAACGTTAGCTAGTTTAATATGGTATCATATAGTCTTCTCATATAATGCCATTTGCCTTCCAGTCCATATCAATAGTCATTTGCTAAGCTTTGTACTAATCTTTGAGCTTACGAGTTCATTTACTCTCCAATTAATATTGTTGAGAGGAAAATTTGGCATGAAAGTTGAACCACGTACATGTTATTTGATGGGCAGAACATTCCAATGGGGTTCGCGAAGAAGCATCTTTCACCAGTAGTGCACGGTGCGAGGCTTGAAGTAGGGCAAAAGCAATGGAATGTGAGGATTAAGAATTACGAGAAGTGTATGAGATTCACATCTGGGTGGGGCATATTTCATAGGGAAAATTGCTTGCAAGATGAAGATACTTGCATATTTGAGCTGCTCAACAAGAATGATTCACACTGTGCTTTCAAAGTTACCATTTTTAAGAAAGCTACTTCCTCAGTGGAGGAAATATAA

mRNA sequence

ATGATTCCAAAAAAGTTTGTTCAAGAATATGGGAAGTTTCTGTCAAGTTCCGTACGTCTCAAGCTTCCTGATGGTAAGGAATGGAAAGTGGGCTTAAAGACCGCCACAAACGGTGCCGTTTGGCTGCAAAATGGCTGGCATCCATTTGCAGAGTACTATTGTTTAGAGTTTGGTTCGATGTTGGTTTTTAGACTCGATGGAAATTCGACTTTCCATACATTAATATTCGATGCAACTGGATCAGAGATTGAATATTCTTTCAACTTTAACCATTTTGAAGGAGATTTTAAAGAGGAGAATGATGCTAATTATTCTGATGAAAGTCTGAAGAATTTTTCTCCACATCCAGAAAAGAGGGAGAATGCCTCATTTCCCTGTTGGCAGCCTCATAAGAGGATGAAAAATGAAGCTTCATTTTCCCGCAAAATGGAACCTCAAGATCAAGAATGCTGTATTCTAAGGGAGAAGCCGAGTTGTAAGAGAATCCCAGAAGATGGGGTTTCAAGGAGAAGGCAGCCATTATCATCTACAGCCGAGAATGCTGAAAAACCTCAAAGATTCAGCGGTTCAAAATCAGAGAAACCTGGTTTCAGAATTGTTATAGGAAAATCAAGTCCAGGAGGCAGATTAAAAATGACCATTCCTAAAGACTTTGCACAAAATTATTTACCCGAAGAGGTTGGAAGAATCAGAATTCAGACTTTAGATGGTGGAAGTTGGTCACTTTTGTACAAATGGAGTCCAAGCCGAGGAGGTTTTGCTTATATTTCAAGAGGGTGGAAGCGCTTTGCAGAGGAAAATCTCTTGAAAAAAGGAGATGTTGGATTCTTTCAAATGATTGAAAAAGATCAATTTTTATTCACCATAGAAGAGACCTCTGCCTCTGCTTCCCATTCGCCAAAGAATAATGCTGCAACTATCAGAAATCCATTCTTTGAAGTTGATGTTTGCTTCAAAAGCTACCAATGTTCGACTCTGAACATTCCAATGGGGTTCGCGAAGAAGCATCTTTCACCAGTAGTGCACGGTGCGAGGCTTGAAGTAGGGCAAAAGCAATGGAATGTGAGGATTAAGAATTACGAGAAGTGTATGAGATTCACATCTGGGTGGGGCATATTTCATAGGGAAAATTGCTTGCAAGATGAAGATACTTGCATATTTGAGCTGCTCAACAAGAATGATTCACACTGTGCTTTCAAAGTTACCATTTTTAAGAAAGCTACTTCCTCAGTGGAGGAAATATAA

Coding sequence (CDS)

ATGATTCCAAAAAAGTTTGTTCAAGAATATGGGAAGTTTCTGTCAAGTTCCGTACGTCTCAAGCTTCCTGATGGTAAGGAATGGAAAGTGGGCTTAAAGACCGCCACAAACGGTGCCGTTTGGCTGCAAAATGGCTGGCATCCATTTGCAGAGTACTATTGTTTAGAGTTTGGTTCGATGTTGGTTTTTAGACTCGATGGAAATTCGACTTTCCATACATTAATATTCGATGCAACTGGATCAGAGATTGAATATTCTTTCAACTTTAACCATTTTGAAGGAGATTTTAAAGAGGAGAATGATGCTAATTATTCTGATGAAAGTCTGAAGAATTTTTCTCCACATCCAGAAAAGAGGGAGAATGCCTCATTTCCCTGTTGGCAGCCTCATAAGAGGATGAAAAATGAAGCTTCATTTTCCCGCAAAATGGAACCTCAAGATCAAGAATGCTGTATTCTAAGGGAGAAGCCGAGTTGTAAGAGAATCCCAGAAGATGGGGTTTCAAGGAGAAGGCAGCCATTATCATCTACAGCCGAGAATGCTGAAAAACCTCAAAGATTCAGCGGTTCAAAATCAGAGAAACCTGGTTTCAGAATTGTTATAGGAAAATCAAGTCCAGGAGGCAGATTAAAAATGACCATTCCTAAAGACTTTGCACAAAATTATTTACCCGAAGAGGTTGGAAGAATCAGAATTCAGACTTTAGATGGTGGAAGTTGGTCACTTTTGTACAAATGGAGTCCAAGCCGAGGAGGTTTTGCTTATATTTCAAGAGGGTGGAAGCGCTTTGCAGAGGAAAATCTCTTGAAAAAAGGAGATGTTGGATTCTTTCAAATGATTGAAAAAGATCAATTTTTATTCACCATAGAAGAGACCTCTGCCTCTGCTTCCCATTCGCCAAAGAATAATGCTGCAACTATCAGAAATCCATTCTTTGAAGTTGATGTTTGCTTCAAAAGCTACCAATGTTCGACTCTGAACATTCCAATGGGGTTCGCGAAGAAGCATCTTTCACCAGTAGTGCACGGTGCGAGGCTTGAAGTAGGGCAAAAGCAATGGAATGTGAGGATTAAGAATTACGAGAAGTGTATGAGATTCACATCTGGGTGGGGCATATTTCATAGGGAAAATTGCTTGCAAGATGAAGATACTTGCATATTTGAGCTGCTCAACAAGAATGATTCACACTGTGCTTTCAAAGTTACCATTTTTAAGAAAGCTACTTCCTCAGTGGAGGAAATATAA

Protein sequence

MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSMLVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRENASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEEI

Homology

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BLAST of Moc01g25090 vs. NCBI nr
Match: XP_022132700.1 (B3 domain-containing transcription factor VRN1-like [Momordica charantia])

HSP 1 Score: 642.1 bits (1655), Expect = 3.3e-180
Identity = 323/420 (76.90%), Postives = 360/420 (85.71%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIPKKFV++YGKFLSSS+ LKLPDG EWKVGLKTATNG+VWL+NGWH FAE+YCLE GSM
Sbjct: 25  MIPKKFVRDYGKFLSSSICLKLPDGMEWKVGLKTATNGSVWLRNGWHTFAEHYCLEHGSM 84

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLDG STFHTLIFDATGSEIEYSF+   F GDF+EE+D + SDESL++F  H +KRE
Sbjct: 85  LVLRLDGKSTFHTLIFDATGSEIEYSFDLKDFGGDFQEESDDD-SDESLESFPQHSKKRE 144

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQ---DQECCILREKPSCKRIPEDGVSRRRQPLSST 180
             SFP  Q  K+M+NE SFS KMEP+    +EC I  EKPSCK+I EDGVS RRQPL+S 
Sbjct: 145 KPSFPSSQSPKKMRNEGSFSPKMEPKTEPQEECYIFWEKPSCKKISEDGVS-RRQPLTSL 204

Query: 181 AENAEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDG 240
            + AE+P+RFSGSKSEKPGFRIV+GKS+ GGR  MTIPKDFAQNYLPE+VGRIRIQTLDG
Sbjct: 205 TKKAEEPKRFSGSKSEKPGFRIVMGKSTVGGRFFMTIPKDFAQNYLPEKVGRIRIQTLDG 264

Query: 241 GSWSLLYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS 300
           GSWSLLYKWSPSRGGFAYISRGWK FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS
Sbjct: 265 GSWSLLYKWSPSRGGFAYISRGWKXFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS 324

Query: 301 H--SPKNNAATIRNPFFEVDVC--FKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQW 360
              SPK  AAT RNPFFEVDV     + +    NIPMGFAKKH+SPV+H ARLEVG+KQW
Sbjct: 325 ASLSPKKTAATTRNPFFEVDVASIAINVRLCVQNIPMGFAKKHISPVIHSARLEVGKKQW 384

Query: 361 NVRIKNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEE 414
            VR+KNYEKC+RFTSGWGIF+ ENCLQD D+C+FELLNKNDSHCAFKVTIF+KATSS+ E
Sbjct: 385 KVRMKNYEKCIRFTSGWGIFYWENCLQDGDSCMFELLNKNDSHCAFKVTIFQKATSSLSE 442

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BLAST of Moc01g25090 vs. NCBI nr
Match: XP_022133305.1 (B3 domain-containing protein Os12g0591400-like [Momordica charantia])

HSP 1 Score: 563.5 bits (1451), Expect = 1.5e-156
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 143 MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG 202
           MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG
Sbjct: 1   MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG 60

Query: 203 KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKR 262
           KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWK 
Sbjct: 61  KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKX 120

Query: 263 FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ 322
           FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ
Sbjct: 121 FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ 180

Query: 323 CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE 382
           CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE
Sbjct: 181 CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE 240

Query: 383 DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI
Sbjct: 241 DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 272

[Close]

BLAST of Moc01g25090 vs. NCBI nr
Match: XP_022132590.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charantia] >XP_022132592.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charantia])

HSP 1 Score: 516.2 bits (1328), Expect = 2.7e-142
Identity = 262/417 (62.83%), Postives = 314/417 (75.30%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIP+KFV+EYGKFLSSSVRLKLPDGKEWKVGLK  TNGAVWLQNGWHPFAE+Y L+ GSM
Sbjct: 1   MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 60

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLD NSTF TLIF+ +GSEIEYSF FN F GDF+EE+D + SDES + F  H +KRE
Sbjct: 61  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDD-SDESFEIFHQHSKKRE 120

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAEN 180
             S P  Q  K+M++E SFS KM PQ+    I REKPSCKR+ ++GVS RRQPLSS A+ 
Sbjct: 121 KPSLPSSQSRKKMRSEGSFSPKMVPQEGR-HISREKPSCKRMAQNGVSNRRQPLSSPAKK 180

Query: 181 AEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSW 240
           AEK          KPGF++V+GKS+ GGR  + IPK+FA+ YL EE G IR+Q  +G +W
Sbjct: 181 AEK----------KPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTW 240

Query: 241 SLLYKWSPSRG-GFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASH- 300
            LLYKW+ SR   F+YIS GWK FAEENLLK GDVGFFQ+IE  +FLFT EETS S S  
Sbjct: 241 PLLYKWTRSRAYAFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPS 300

Query: 301 -SPKNNAATIRNPFFEVDVCFKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRI 360
            SPK  A T  NPFF+VD+ F SY+ + LNIPMGF KKH+ P  H   L++G K+W V +
Sbjct: 301 LSPKKEAETATNPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSM 360

Query: 361 KNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           KNY++C RF++GW  F+R+N LQD DTC+FELLNKN SH  FKVTIF+K T+SVE +
Sbjct: 361 KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLNKNHSHFVFKVTIFRKITASVENV 405

[Close]

BLAST of Moc01g25090 vs. NCBI nr
Match: XP_022132589.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 516.2 bits (1328), Expect = 2.7e-142
Identity = 262/417 (62.83%), Postives = 314/417 (75.30%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIP+KFV+EYGKFLSSSVRLKLPDGKEWKVGLK  TNGAVWLQNGWHPFAE+Y L+ GSM
Sbjct: 23  MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 82

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLD NSTF TLIF+ +GSEIEYSF FN F GDF+EE+D + SDES + F  H +KRE
Sbjct: 83  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDD-SDESFEIFHQHSKKRE 142

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAEN 180
             S P  Q  K+M++E SFS KM PQ+    I REKPSCKR+ ++GVS RRQPLSS A+ 
Sbjct: 143 KPSLPSSQSRKKMRSEGSFSPKMVPQEGR-HISREKPSCKRMAQNGVSNRRQPLSSPAKK 202

Query: 181 AEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSW 240
           AEK          KPGF++V+GKS+ GGR  + IPK+FA+ YL EE G IR+Q  +G +W
Sbjct: 203 AEK----------KPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTW 262

Query: 241 SLLYKWSPSRG-GFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASH- 300
            LLYKW+ SR   F+YIS GWK FAEENLLK GDVGFFQ+IE  +FLFT EETS S S  
Sbjct: 263 PLLYKWTRSRAYAFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPS 322

Query: 301 -SPKNNAATIRNPFFEVDVCFKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRI 360
            SPK  A T  NPFF+VD+ F SY+ + LNIPMGF KKH+ P  H   L++G K+W V +
Sbjct: 323 LSPKKEAETATNPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSM 382

Query: 361 KNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           KNY++C RF++GW  F+R+N LQD DTC+FELLNKN SH  FKVTIF+K T+SVE +
Sbjct: 383 KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLNKNHSHFVFKVTIFRKITASVENV 427

[Close]

BLAST of Moc01g25090 vs. NCBI nr
Match: XP_022132593.1 (B3 domain-containing transcription factor VRN1-like [Momordica charantia])

HSP 1 Score: 424.9 bits (1091), Expect = 8.2e-115
Identity = 260/572 (45.45%), Postives = 305/572 (53.32%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIPKKFV +YGKFLS+SVRL+L DG EWK+GL TA NGAVWLQNGWHPFAE+Y LEFGS+
Sbjct: 35  MIPKKFVTDYGKFLSTSVRLRLLDGMEWKIGLTTAANGAVWLQNGWHPFAEHYSLEFGSL 94

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDE------------- 120
           LVFR DG STFHT IFD TGSEI+Y  NFN   GDF+EE+DANYS +             
Sbjct: 95  LVFRFDGCSTFHTTIFDITGSEIKYRCNFNDSSGDFEEEDDANYSKQREKPSFHCQEFYI 154

Query: 121 ------------------------------------SLKNFSP----------------- 180
                                               SLK+  P                 
Sbjct: 155 NRKKRSCKRMREDGVSRRRQALSSTTKKADEDQRFSSLKSGKPGFNVVMGKSNVGRGFTM 214

Query: 181 -----HPEK--------------------------------------------------- 240
                  EK                                                   
Sbjct: 215 IIPKEFAEKYLVEEFGSIGIQTSDGRSWSLLYKWSRSQVRDYAYISDGWKRFAEGNRLKE 274

Query: 241 ---------------------------------RENASFPCWQPHKRMKNEASFSRKMEP 300
                                            +E  SFPC    K+M+NE  F  KMEP
Sbjct: 275 GDVVFFQLIKRDKLLFQTIKYRCNFDDSSGDFEKEKPSFPC---RKKMRNEGLFFPKMEP 334

Query: 301 QDQECCILREKPSCKRIPEDGVSRRRQPLS--STAENAEKPQRFSGSKSEKPGFRIVIGK 360
           +  E C +  K        DGVSRRRQPLS   TA+ AE+PQR    KSEKPGF++V+GK
Sbjct: 335 EAAEECYIYRK--------DGVSRRRQPLSCTGTAKKAEEPQRLCNLKSEKPGFKVVMGK 394

Query: 361 SSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSR-GGFAYISRGWKR 410
           S   GR  MTIPK FA  YL EE G I I T DG SWSLLYKWS ++   +AYIS GWKR
Sbjct: 395 SYVTGRCNMTIPKKFADKYLVEEFGTIGIHTSDGRSWSLLYKWSRTQVRDYAYISDGWKR 454

[Close]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-21
Identity = 91/325 (28.00%), Postives = 147/325 (45.23%), Query Frame = 0


Query: 2   IPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSML 61
           +P KFV ++   LS +V L +PDG  W+VGL+ A N  +W Q+GW  F + Y +  G +L
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFRLDGNSTFHTLIFDATGSEIEYSFN------FNHFE-----GDFKEEN---------- 121
           +FR +GNS F   IF+ + SEI Y          NHF+      D ++E+          
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 122 -----------DANYSDESLKNFSPHPEKRENASFPCWQPHKRMKNEASFSRKMEPQDQE 181
                      +  Y+  +++     P K E  +     P KR + +    +  +P++  
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKK----KNADPEEIN 201

Query: 182 CCILR--EKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGS-KSEKPGFRIVIGKSSP 241
               R  +  +  +  E   +R+R   + TAE  E+    + + +   P FR+V+  S  
Sbjct: 202 SSAPRDDDPENRSKFYESASARKR---TVTAEERERAINAAKTFEPTNPFFRVVLRPSYL 261

Query: 242 GGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSL--LYKWSPSRGGFAYISRGWKRFA 290
                M +P  FA+ YL    G I++Q L    W +  LYK      G A  S+GW  F 
Sbjct: 262 YRGCIMYLPSGFAEKYLSGISGFIKVQ-LAEKQWPVRCLYK-----AGRAKFSQGWYEFT 321

[Close]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot
Match: Q851V5 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-12
Identity = 76/300 (25.33%), Postives = 137/300 (45.67%), Query Frame = 0


Query: 1    MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
            +IP +F+Q +   +  +++L+L DG  + V + T   G + LQ+GW  F   + L+ G  
Sbjct: 747  IIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQV-TKNLGKISLQSGWKAFVTAHDLQMGDF 806

Query: 61   LVFRLDGNSTFHTLIFDATGSEIEYS----FNFNHFEGDFKEENDANYSDESLKNFSPHP 120
            LVF  DG S    LIF  +G E  +S     N  H    ++E    + +   L   SP  
Sbjct: 807  LVFSYDGISKLKVLIFGPSGCEKVHSRSTLKNATHCGEKWEEPLHISSNSHDLPVKSPQN 866

Query: 121  EKRENASFPCWQPHKRMKNEASFSR-KMEPQDQE-----CCILREKPSCKRIPEDGVSRR 180
              +       W   ++  + A+     ++  D +      CIL   P   R+ +     +
Sbjct: 867  VSKSEKQ---WDSSEQENDTANIEEVALQGDDLQGHPVLNCIL---PKHTRLTD----MQ 926

Query: 181  RQPLSSTAENAEKPQRFSGSKSEKPGFRIVIGKSSPGGRLK-MTIPKDFAQNYLPEEVGR 240
            +Q L S         +     SE P +  ++ KS   G+ + + I +++A  YLP +   
Sbjct: 927  KQQLES---------KVGAIHSEIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELN 986

Query: 241  IRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTI 290
            + +Q   G +W +L +   +R     +S GW RFA+EN L+ GD+  F++++K ++   +
Sbjct: 987  MTLQR-HGKNWEVLCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNV 1023

[Close]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot
Match: Q851V1 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.0e-11
Identity = 71/284 (25.00%), Postives = 125/284 (44.01%), Query Frame = 0


Query: 2   IPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSML 61
           IP +F+  +G  +  S++L+   G  + V + T  +G V LQ+GW  +   + L+ G  L
Sbjct: 46  IPNEFLHNFGGKIPKSIKLETRSGLTFDVQV-TKNSGRVVLQSGWASYVSAHDLKIGDFL 105

Query: 62  VFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKREN 121
           VF+  G+S   TLIFD++G E            +   +      D +++N     +KR+ 
Sbjct: 106 VFKYSGDSQLKTLIFDSSGCEKVC---------EKPVDMSGRSYDIAMRNSQDEKKKRKQ 165

Query: 122 ASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENA 181
                    K   +E     ++ P     CIL  +    R+ ++ +  + + ++      
Sbjct: 166 RDISRQGTVK--PSEEGLKAELVPG----CILPSRTDLTRLQKNILIEKVKAIN------ 225

Query: 182 EKPQRFSGSKSEKPGFRIVIGKSSPGG-RLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSW 241
                     SE P +  V+  SS  G    + I K +A  YLP E G + +Q   G SW
Sbjct: 226 ----------SETPIYGYVMNNSSIHGIPCTVEISKKYADVYLPFEDGTVVLQH-HGKSW 285

Query: 242 SL---LYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIE 282
           ++   L K +  R       +GW++FA +N L  GD+  F +++
Sbjct: 286 NVRCCLTKQNSKR-----FLKGWRQFAGDNKLHLGDICLFDLLK 291

[Close]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot
Match: Q10GM4 (B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622100 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.7e-11
Identity = 77/317 (24.29%), Postives = 123/317 (38.80%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           ++P +F   +   +S  V LK P GK W +G+  +  G + L++GW  F +   ++    
Sbjct: 45  IVPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRSGWKEFVDANGVQENDC 104

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEE-----------NDANYSDESL 120
           L+FR  G S+F  LIFD +G E + S +F    G  +EE            D N   +  
Sbjct: 105 LLFRYSGVSSFDVLIFDPSGCE-KASPHFVENRGFGREEKSAGAEGGGRDGDKNGHHQHQ 164

Query: 121 KNFSPHPEKRENASFP-----------CWQPHKRMKNEASFSRKMEPQDQECCILREKPS 180
              +PH       S P             Q H+  K E     + E +D++         
Sbjct: 165 LEMTPHKNSSRCRSIPSACKRGLFSDEIEQDHREEKKEGDDEDEDEDEDED--------- 224

Query: 181 CKRIPEDGVSRR---RQPLSSTAENAEKPQRFSGSK---SEKPGFRIVIGKSSPGGRLK- 240
              + +DG  R    R     T  N  K  +   S+     +PG  +++        L  
Sbjct: 225 ---VDKDGEDRYYFCRHGGRVTEYNLSKGDKEEISRVPVPVEPGNPVLVKVIHASHLLSS 284

Query: 241 ----MTIPKDFAQNYLPEEVGRIRIQTLDGG-----SWSLLYKWSPSRGGFAYISRGWKR 280
               + +  +FA  YL   + R  +    GG      W + +    S  GF     GW+R
Sbjct: 285 RYSTVGVSPEFAGRYLGPAMAREVVMERGGGGGGGDQWHVRFVRRESSRGFH--GTGWRR 344

[Close]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 309 NPFFEVDVCFKS--YQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRF 368
           NP+F V V   S  Y+   + +P GFA+K+LS +    +L++G+KQW VR        +F
Sbjct: 126 NPYFRV-VLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKF 185

Query: 369 TSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFK 406
           + GW  F  EN + + D C+FELL   D     +VT F+
Sbjct: 186 SQGWYEFTLENNIGEGDVCVFELLRTRD--FVLEVTAFR 221

[Close]

BLAST of Moc01g25090 vs. ExPASy TrEMBL
Match: A0A6J1BT74 (B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=3673 GN=LOC111005498 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.6e-180
Identity = 323/420 (76.90%), Postives = 360/420 (85.71%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIPKKFV++YGKFLSSS+ LKLPDG EWKVGLKTATNG+VWL+NGWH FAE+YCLE GSM
Sbjct: 25  MIPKKFVRDYGKFLSSSICLKLPDGMEWKVGLKTATNGSVWLRNGWHTFAEHYCLEHGSM 84

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLDG STFHTLIFDATGSEIEYSF+   F GDF+EE+D + SDESL++F  H +KRE
Sbjct: 85  LVLRLDGKSTFHTLIFDATGSEIEYSFDLKDFGGDFQEESDDD-SDESLESFPQHSKKRE 144

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQ---DQECCILREKPSCKRIPEDGVSRRRQPLSST 180
             SFP  Q  K+M+NE SFS KMEP+    +EC I  EKPSCK+I EDGVS RRQPL+S 
Sbjct: 145 KPSFPSSQSPKKMRNEGSFSPKMEPKTEPQEECYIFWEKPSCKKISEDGVS-RRQPLTSL 204

Query: 181 AENAEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDG 240
            + AE+P+RFSGSKSEKPGFRIV+GKS+ GGR  MTIPKDFAQNYLPE+VGRIRIQTLDG
Sbjct: 205 TKKAEEPKRFSGSKSEKPGFRIVMGKSTVGGRFFMTIPKDFAQNYLPEKVGRIRIQTLDG 264

Query: 241 GSWSLLYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS 300
           GSWSLLYKWSPSRGGFAYISRGWK FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS
Sbjct: 265 GSWSLLYKWSPSRGGFAYISRGWKXFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASAS 324

Query: 301 H--SPKNNAATIRNPFFEVDVC--FKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQW 360
              SPK  AAT RNPFFEVDV     + +    NIPMGFAKKH+SPV+H ARLEVG+KQW
Sbjct: 325 ASLSPKKTAATTRNPFFEVDVASIAINVRLCVQNIPMGFAKKHISPVIHSARLEVGKKQW 384

Query: 361 NVRIKNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEE 414
            VR+KNYEKC+RFTSGWGIF+ ENCLQD D+C+FELLNKNDSHCAFKVTIF+KATSS+ E
Sbjct: 385 KVRMKNYEKCIRFTSGWGIFYWENCLQDGDSCMFELLNKNDSHCAFKVTIFQKATSSLSE 442

[Close]

BLAST of Moc01g25090 vs. ExPASy TrEMBL
Match: A0A6J1BUW1 (B3 domain-containing protein Os12g0591400-like OS=Momordica charantia OX=3673 GN=LOC111005917 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 7.1e-157
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 143 MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG 202
           MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG
Sbjct: 1   MEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGSKSEKPGFRIVIG 60

Query: 203 KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKR 262
           KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWK 
Sbjct: 61  KSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKX 120

Query: 263 FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ 322
           FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ
Sbjct: 121 FAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASHSPKNNAATIRNPFFEVDVCFKSYQ 180

Query: 323 CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE 382
           CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE
Sbjct: 181 CSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRFTSGWGIFHRENCLQDE 240

Query: 383 DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI
Sbjct: 241 DTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 272

[Close]

BLAST of Moc01g25090 vs. ExPASy TrEMBL
Match: A0A6J1BU95 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005417 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.3e-142
Identity = 262/417 (62.83%), Postives = 314/417 (75.30%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIP+KFV+EYGKFLSSSVRLKLPDGKEWKVGLK  TNGAVWLQNGWHPFAE+Y L+ GSM
Sbjct: 1   MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 60

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLD NSTF TLIF+ +GSEIEYSF FN F GDF+EE+D + SDES + F  H +KRE
Sbjct: 61  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDD-SDESFEIFHQHSKKRE 120

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAEN 180
             S P  Q  K+M++E SFS KM PQ+    I REKPSCKR+ ++GVS RRQPLSS A+ 
Sbjct: 121 KPSLPSSQSRKKMRSEGSFSPKMVPQEGR-HISREKPSCKRMAQNGVSNRRQPLSSPAKK 180

Query: 181 AEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSW 240
           AEK          KPGF++V+GKS+ GGR  + IPK+FA+ YL EE G IR+Q  +G +W
Sbjct: 181 AEK----------KPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTW 240

Query: 241 SLLYKWSPSRG-GFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASH- 300
            LLYKW+ SR   F+YIS GWK FAEENLLK GDVGFFQ+IE  +FLFT EETS S S  
Sbjct: 241 PLLYKWTRSRAYAFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPS 300

Query: 301 -SPKNNAATIRNPFFEVDVCFKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRI 360
            SPK  A T  NPFF+VD+ F SY+ + LNIPMGF KKH+ P  H   L++G K+W V +
Sbjct: 301 LSPKKEAETATNPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSM 360

Query: 361 KNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           KNY++C RF++GW  F+R+N LQD DTC+FELLNKN SH  FKVTIF+K T+SVE +
Sbjct: 361 KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLNKNHSHFVFKVTIFRKITASVENV 405

[Close]

BLAST of Moc01g25090 vs. ExPASy TrEMBL
Match: A0A6J1BTG9 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005417 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.3e-142
Identity = 262/417 (62.83%), Postives = 314/417 (75.30%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIP+KFV+EYGKFLSSSVRLKLPDGKEWKVGLK  TNGAVWLQNGWHPFAE+Y L+ GSM
Sbjct: 23  MIPQKFVEEYGKFLSSSVRLKLPDGKEWKVGLKATTNGAVWLQNGWHPFAEHYRLKHGSM 82

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LV RLD NSTF TLIF+ +GSEIEYSF FN F GDF+EE+D + SDES + F  H +KRE
Sbjct: 83  LVLRLDENSTFQTLIFEPSGSEIEYSFKFNDFGGDFQEESDDD-SDESFEIFHQHSKKRE 142

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSSTAEN 180
             S P  Q  K+M++E SFS KM PQ+    I REKPSCKR+ ++GVS RRQPLSS A+ 
Sbjct: 143 KPSLPSSQSRKKMRSEGSFSPKMVPQEGR-HISREKPSCKRMAQNGVSNRRQPLSSPAKK 202

Query: 181 AEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSW 240
           AEK          KPGF++V+GKS+ GGR  + IPK+FA+ YL EE G IR+Q  +G +W
Sbjct: 203 AEK----------KPGFKVVMGKSNVGGRFNLIIPKEFAEKYLAEEFGIIRVQNSNGKTW 262

Query: 241 SLLYKWSPSRG-GFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQFLFTIEETSASASH- 300
            LLYKW+ SR   F+YIS GWK FAEENLLK GDVGFFQ+IE  +FLFT EETS S S  
Sbjct: 263 PLLYKWTRSRAYAFSYISSGWKCFAEENLLKVGDVGFFQLIENGRFLFTTEETSPSTSPS 322

Query: 301 -SPKNNAATIRNPFFEVDVCFKSYQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRI 360
            SPK  A T  NPFF+VD+ F SY+ + LNIPMGF KKH+ P  H   L++G K+W V +
Sbjct: 323 LSPKKEAETATNPFFKVDIHFVSYRSTVLNIPMGFGKKHIPPGTHTVMLKLGGKKWKVSM 382

Query: 361 KNYEKCMRFTSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFKKATSSVEEI 415
           KNY++C RF++GW  F+R+N LQD DTC+FELLNKN SH  FKVTIF+K T+SVE +
Sbjct: 383 KNYDRCFRFSAGWCSFYRDNALQDGDTCLFELLNKNHSHFVFKVTIFRKITASVENV 427

[Close]

BLAST of Moc01g25090 vs. ExPASy TrEMBL
Match: A0A6J1BWP5 (B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=3673 GN=LOC111005418 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 4.0e-115
Identity = 260/572 (45.45%), Postives = 305/572 (53.32%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           MIPKKFV +YGKFLS+SVRL+L DG EWK+GL TA NGAVWLQNGWHPFAE+Y LEFGS+
Sbjct: 35  MIPKKFVTDYGKFLSTSVRLRLLDGMEWKIGLTTAANGAVWLQNGWHPFAEHYSLEFGSL 94

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDE------------- 120
           LVFR DG STFHT IFD TGSEI+Y  NFN   GDF+EE+DANYS +             
Sbjct: 95  LVFRFDGCSTFHTTIFDITGSEIKYRCNFNDSSGDFEEEDDANYSKQREKPSFHCQEFYI 154

Query: 121 ------------------------------------SLKNFSP----------------- 180
                                               SLK+  P                 
Sbjct: 155 NRKKRSCKRMREDGVSRRRQALSSTTKKADEDQRFSSLKSGKPGFNVVMGKSNVGRGFTM 214

Query: 181 -----HPEK--------------------------------------------------- 240
                  EK                                                   
Sbjct: 215 IIPKEFAEKYLVEEFGSIGIQTSDGRSWSLLYKWSRSQVRDYAYISDGWKRFAEGNRLKE 274

Query: 241 ---------------------------------RENASFPCWQPHKRMKNEASFSRKMEP 300
                                            +E  SFPC    K+M+NE  F  KMEP
Sbjct: 275 GDVVFFQLIKRDKLLFQTIKYRCNFDDSSGDFEKEKPSFPC---RKKMRNEGLFFPKMEP 334

Query: 301 QDQECCILREKPSCKRIPEDGVSRRRQPLS--STAENAEKPQRFSGSKSEKPGFRIVIGK 360
           +  E C +  K        DGVSRRRQPLS   TA+ AE+PQR    KSEKPGF++V+GK
Sbjct: 335 EAAEECYIYRK--------DGVSRRRQPLSCTGTAKKAEEPQRLCNLKSEKPGFKVVMGK 394

Query: 361 SSPGGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSR-GGFAYISRGWKR 410
           S   GR  MTIPK FA  YL EE G I I T DG SWSLLYKWS ++   +AYIS GWKR
Sbjct: 395 SYVTGRCNMTIPKKFADKYLVEEFGTIGIHTSDGRSWSLLYKWSRTQVRDYAYISDGWKR 454

[Close]

BLAST of Moc01g25090 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 102.8 bits (255), Expect = 6.6e-22
Identity = 91/325 (28.00%), Postives = 147/325 (45.23%), Query Frame = 0


Query: 2   IPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSML 61
           +P KFV ++   LS +V L +PDG  W+VGL+ A N  +W Q+GW  F + Y +  G +L
Sbjct: 22  VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQDGWQEFVDRYSIRIGYLL 81

Query: 62  VFRLDGNSTFHTLIFDATGSEIEYSFN------FNHFE-----GDFKEEN---------- 121
           +FR +GNS F   IF+ + SEI Y          NHF+      D ++E+          
Sbjct: 82  IFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVY 141

Query: 122 -----------DANYSDESLKNFSPHPEKRENASFPCWQPHKRMKNEASFSRKMEPQDQE 181
                      +  Y+  +++     P K E  +     P KR + +    +  +P++  
Sbjct: 142 PSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKK----KNADPEEIN 201

Query: 182 CCILR--EKPSCKRIPEDGVSRRRQPLSSTAENAEKPQRFSGS-KSEKPGFRIVIGKSSP 241
               R  +  +  +  E   +R+R   + TAE  E+    + + +   P FR+V+  S  
Sbjct: 202 SSAPRDDDPENRSKFYESASARKR---TVTAEERERAINAAKTFEPTNPFFRVVLRPSYL 261

Query: 242 GGRLKMTIPKDFAQNYLPEEVGRIRIQTLDGGSWSL--LYKWSPSRGGFAYISRGWKRFA 290
                M +P  FA+ YL    G I++Q L    W +  LYK      G A  S+GW  F 
Sbjct: 262 YRGCIMYLPSGFAEKYLSGISGFIKVQ-LAEKQWPVRCLYK-----AGRAKFSQGWYEFT 321

[Close]

BLAST of Moc01g25090 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 62.8 bits (151), Expect = 7.6e-10
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 309 NPFFEVDVCFKS--YQCSTLNIPMGFAKKHLSPVVHGARLEVGQKQWNVRIKNYEKCMRF 368
           NP+F V V   S  Y+   + +P GFA+K+LS +    +L++G+KQW VR        +F
Sbjct: 126 NPYFRV-VLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKF 185

Query: 369 TSGWGIFHRENCLQDEDTCIFELLNKNDSHCAFKVTIFK 406
           + GW  F  EN + + D C+FELL   D     +VT F+
Sbjct: 186 SQGWYEFTLENNIGEGDVCVFELLRTRD--FVLEVTAFR 221

[Close]

BLAST of Moc01g25090 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-09
Identity = 75/322 (23.29%), Postives = 129/322 (40.06%), Query Frame = 0


Query: 1   MIPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSM 60
           +IP+KF     + L   V LK P G  + VG++      +  + GW  F + + LE   +
Sbjct: 38  VIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDL 97

Query: 61  LVFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFSPHPEKRE 120
           LVF+  G S F  L+FD                G    E   +Y          H EK +
Sbjct: 98  LVFKFHGVSEFEVLVFD----------------GQTLCEKPTSY----FVRKCGHAEKTK 157

Query: 121 NASFPCWQPHKRMKNEASFSRKMEPQDQECCILREKPSCKRIPEDGVSRRRQPLSS---- 180
            AS   ++  + + ++   +    P       +R      + P  G  + R+ LS+    
Sbjct: 158 -ASHTGYEQEEHINSDIDTASAQLPVISPTSTVRVSEG--KYPLSGFKKMRRELSNDNLD 217

Query: 181 --------TAENAEKPQRFSGSKSEKPGFRIVIGKSSPGGRLKMTIP-KDFAQNYL--PE 240
                   +A + +K    +       GF + + +S    +  +TIP K   +N L   +
Sbjct: 218 QKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQ 277

Query: 241 EVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKRFAEENLLKKGDVGFFQMIEKDQ- 300
           EV    +  +D   W + +    +RG    IS GWK+F ++N L++GDV  F+    +  
Sbjct: 278 EV----VMQVDQTKWEMKFNIFGARGS-GGISTGWKKFVQDNNLREGDVCVFEPANSETK 331

[Close]

BLAST of Moc01g25090 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 60.1 bits (144), Expect = 4.9e-09
Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 0


Query: 2   IPKKFVQEYGKFLSSSVRLKLPDGKEWKVGLKTATNGAVWLQNGWHPFAEYYCLEFGSML 61
           +P +FV+ +G  L+ +V L+ P G +  + +K      VW + GW  FAE + L  G  L
Sbjct: 50  VPARFVR-FGPKLTDNVTLQTPVGFKRSIRIK-RIGDEVWFEKGWSEFAEAHSLSDGHFL 109

Query: 62  VFRLDGNSTFHTLIFDATGSEIEYSFNFNHFEGDFKEENDANYSDESLKNFS 114
            F  +G+S F  +IFD + SEIEY         D  ++N     D+  + F+
Sbjct: 110 FFHYEGDSCFRVVIFDVSASEIEYPL-------DDTDDNREEVMDDDEQGFT 152

[Close]

BLAST of Moc01g25090 vs. TAIR 10
Match: AT2G24700.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 49.7 bits (117), Expect = 6.7e-06
Identity = 49/207 (23.67%), Postives = 83/207 (40.10%), Query Frame = 0


Query: 207 GGRLK---MTIPKDFAQNYLPEEVGRIRIQTLDGGSWSLLYKWSPSRGGFAYISRGWKRF 266
           G  LK   + IPK+FA +       +I +   +G SW +  +      G  Y+ RGW+ F
Sbjct: 157 GSNLKRDTLYIPKEFALSNGLMNKYQIVLMNEEGESWKIDLRREAYNYGRFYMRRGWRSF 216

Query: 267 AEENLLKKGDVGFFQMIEKDQ------FLFTIEETSASAS---HSPKNNAATIRNP---F 326
              N  K GDV  F++++ ++      F  TIE+     S   H  +   A   +P    
Sbjct: 217 CIANGKKPGDVFAFKLVKNEETPMIQLFPMTIEDLDKLQSLPRHKIRKTEAAPSSPDLSS 276

Query: 327 FEVDVCFKSYQCSTLNIPMGFAKKH-LSPVVHGARLEVGQKQWNVRIKNYEKCMRFTS-- 386
           F   V   +     L +P  F   + L        +    + W + +K+     RF +  
Sbjct: 277 FVATVTASNLSRDRLYLPKTFIMSNGLLKKFQMCLMNEEGESWTIDVKHEAHTGRFLTIR 336

Query: 387 GWGIFHRENCLQDEDTCIFELLNKNDS 396
           GW  F   N  +  D   F+L++  ++
Sbjct: 337 GWRRFCVANGKKPGDLLKFKLVHNEET 363

The following BLAST results are available for this feature:

BLAST of Moc01g25090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132700.1	3.3e-180	76.90	B3 domain-containing transcription factor VRN1-like [Momordica charantia]	[more]
XP_022133305.1	1.5e-156	99.63	B3 domain-containing protein Os12g0591400-like [Momordica charantia]	[more]
XP_022132590.1	2.7e-142	62.83	B3 domain-containing transcription factor VRN1-like isoform X2 [Momordica charan...	[more]
XP_022132589.1	2.7e-142	62.83	B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charan...	[more]
XP_022132593.1	8.2e-115	45.45	B3 domain-containing transcription factor VRN1-like [Momordica charantia]	[more]

BLAST of Moc01g25090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	9.3e-21	28.00	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q851V5	2.1e-12	25.33	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]
Q851V1	3.0e-11	25.00	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]
Q10GM4	6.7e-11	24.29	B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9XIB5	1.1e-08	37.37	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]

BLAST of Moc01g25090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BT74	1.6e-180	76.90	B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=36...	[more]
A0A6J1BUW1	7.1e-157	99.63	B3 domain-containing protein Os12g0591400-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1BU95	1.3e-142	62.83	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Momordica char...	[more]
A0A6J1BTG9	1.3e-142	62.83	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica char...	[more]
A0A6J1BWP5	4.0e-115	45.45	B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=36...	[more]

BLAST of Moc01g25090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	6.6e-22	28.00	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	7.6e-10	37.37	related to vernalization1 1	[more]
AT4G33280.1	1.3e-09	23.29	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	4.9e-09	32.14	AP2/B3-like transcriptional factor family protein	[more]
AT2G24700.1	6.7e-06	23.67	Transcriptional factor B3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 1..79 e-value: 3.6E-4 score: 29.9 coord: 197..293 e-value: 4.5E-11 score: 52.8 coord: 317..407 e-value: 4.1E-4 score: 29.7
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 324..405 e-value: 2.7E-9 score: 36.8 coord: 207..288 e-value: 4.6E-14 score: 52.1 coord: 1..78 e-value: 2.6E-11 score: 43.2
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 197..293 score: 14.324953
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 1..79 score: 14.931317
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 311..407 score: 10.277822
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 1..77 e-value: 1.43296E-14 score: 66.9677
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 321..405 e-value: 2.33045E-13 score: 63.8861
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 195..289 e-value: 1.08912E-14 score: 67.3529
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 293..408 e-value: 2.4E-22 score: 80.9 coord: 175..292 e-value: 2.1E-21 score: 77.9
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 1..80 e-value: 3.0E-18 score: 67.6
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 192..291
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 1..86
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 308..406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..185
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 1..288
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 291..405
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 291..405
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 1..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g25090.1	Moc01g25090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding