Moc01g24080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g24080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor HEC3-like
Location	chr1: 16926477 .. 16927192 (-)
RNA-Seq Expression	Moc01g24080
Synteny	Moc01g24080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCCCCTCACCTCTCCAACTTCACTTCCCATCATCTGATCCAACTCTCCTCCATGGATGACCACCGCGTCCACGACCTCGACCTCGACTCCATTTGGCCCGCCTCGTTCTTGCCTCTTCAACCCCACGATCCCCGCCAGCAGCAACTCCCTTCTCCTTCTTCCTCCACCCACCTGCTGATAGGTTACGATATATTTAATCATTTATTTAATTAACACTTGTCTCCCAACTTTAAAATTAGTGTCAATATTAATTAGAAAACACGGAGGCAGGTGATGATGAGGAAGAGCCCGAAGAAGAGCTCGGGGTCATGAAGGAGATGATGTACAAGATCGCGGCGATGCAACCGGTGGACATTGACCCTTCGACCATTCGGAAGCCGAAGCGGCGGAACGTTCGGATTAGCGATGACCCGCAGAGCATTGCCGCCCGTCTCCGGCGAGAGAGGATCAGCGAGAAGATCAGAGTTCTTCAGCGGCTTGTGCCCGGTGGTACTAAGATGGACACAGCTTCCATGTTAGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCCGGTTGCTGCAGGTCAGTCAGCCGCAACAGCCGGGCACCGGCGGTGGCGCCGCCGCCGGAGGGTGGCCGTTTACATTCGATAAGGCTAACGGTTCAACCTCCTCATCCACTTCCTTGGAAGCTCCTGCCATTACACCGTCGGGATGGTGA

mRNA sequence

ATGGAACCCCCTCACCTCTCCAACTTCACTTCCCATCATCTGATCCAACTCTCCTCCATGGATGACCACCGCGTCCACGACCTCGACCTCGACTCCATTTGGCCCGCCTCGTTCTTGCCTCTTCAACCCCACGATCCCCGCCAGCAGCAACTCCCTTCTCCTTCTTCCTCCACCCACCTGCTGATAGGTGATGATGAGGAAGAGCCCGAAGAAGAGCTCGGGGTCATGAAGGAGATGATGTACAAGATCGCGGCGATGCAACCGGTGGACATTGACCCTTCGACCATTCGGAAGCCGAAGCGGCGGAACGTTCGGATTAGCGATGACCCGCAGAGCATTGCCGCCCGTCTCCGGCGAGAGAGGATCAGCGAGAAGATCAGAGTTCTTCAGCGGCTTGTGCCCGGTGGTACTAAGATGGACACAGCTTCCATGTTAGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCCGGTTGCTGCAGGTCAGTCAGCCGCAACAGCCGGGCACCGGCGGTGGCGCCGCCGCCGGAGGGTGGCCGTTTACATTCGATAAGGCTAACGGTTCAACCTCCTCATCCACTTCCTTGGAAGCTCCTGCCATTACACCGTCGGGATGGTGA

Coding sequence (CDS)

ATGGAACCCCCTCACCTCTCCAACTTCACTTCCCATCATCTGATCCAACTCTCCTCCATGGATGACCACCGCGTCCACGACCTCGACCTCGACTCCATTTGGCCCGCCTCGTTCTTGCCTCTTCAACCCCACGATCCCCGCCAGCAGCAACTCCCTTCTCCTTCTTCCTCCACCCACCTGCTGATAGGTGATGATGAGGAAGAGCCCGAAGAAGAGCTCGGGGTCATGAAGGAGATGATGTACAAGATCGCGGCGATGCAACCGGTGGACATTGACCCTTCGACCATTCGGAAGCCGAAGCGGCGGAACGTTCGGATTAGCGATGACCCGCAGAGCATTGCCGCCCGTCTCCGGCGAGAGAGGATCAGCGAGAAGATCAGAGTTCTTCAGCGGCTTGTGCCCGGTGGTACTAAGATGGACACAGCTTCCATGTTAGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCCGGTTGCTGCAGGTCAGTCAGCCGCAACAGCCGGGCACCGGCGGTGGCGCCGCCGCCGGAGGGTGGCCGTTTACATTCGATAAGGCTAACGGTTCAACCTCCTCATCCACTTCCTTGGAAGCTCCTGCCATTACACCGTCGGGATGGTGA

Protein sequence

MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHLLIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGGWPFTFDKANGSTSSSTSLEAPAITPSGW

Homology

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BLAST of Moc01g24080 vs. NCBI nr
Match: XP_022133300.1 (transcription factor HEC3-like [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.6e-111
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL 60
           MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL
Sbjct: 1   MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL 60

Query: 61  LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE 120
           LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE
Sbjct: 61  LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE 120

Query: 121 RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 180
           RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG
Sbjct: 121 RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 180

Query: 181 WPFTFDKANGSTSSSTSLEAPAITPSGW 209
           WPFTFDKANGSTSSSTSLEAPAITPSGW
Sbjct: 181 WPFTFDKANGSTSSSTSLEAPAITPSGW 208

[Close]

BLAST of Moc01g24080 vs. NCBI nr
Match: XP_004148648.2 (transcription factor HEC3 [Cucumis sativus] >KGN48364.1 hypothetical protein Csa_003305 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 7.8e-74
Identity = 168/228 (73.68%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV-----HDLDLDSIWPASFLPLQPHDPRQQQLPSPS 60
           M+P HLSN   H  +  S+MDDH +     H  DLDSIWP SFLP Q  D   QQL  P+
Sbjct: 1   MDPHHLSNPPPH--LDRSAMDDHHILHHHHHVHDLDSIWP-SFLPFQLSDHHDQQL--PT 60

Query: 61  SSTHLLI---------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120
           SSTH +I         GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI
Sbjct: 61  SSTHFVIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120

Query: 121 SDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ 180
           SDDPQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ
Sbjct: 121 SDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQ 180

Query: 181 -PQQPGTGGGA----AAGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
            PQQP T GGA      GGW F F+KANGSTSSSTS+E  PAITP+GW
Sbjct: 181 PPQQPSTSGGATTAGGGGGWHFPFNKANGSTSSSTSMENTPAITPTGW 223

[Close]

BLAST of Moc01g24080 vs. NCBI nr
Match: XP_016899193.1 (PREDICTED: transcription factor HEC3-like [Cucumis melo] >KAA0025535.1 transcription factor HEC3-like [Cucumis melo var. makuwa] >TYK25694.1 transcription factor HEC3-like [Cucumis melo var. makuwa])

HSP 1 Score: 287.7 bits (735), Expect = 7.8e-74
Identity = 168/225 (74.67%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV--HDLDLDSIWPASFLPLQPHDPRQQQLPSPSSST 60
           M+P HLSN   H  +  S+MDDH +  H  DLDSIWP SFLP Q  D   QQL  P+SST
Sbjct: 1   MDPHHLSNPPPH--LDRSAMDDHHILHHVHDLDSIWP-SFLPFQLSDHHDQQL--PTSST 60

Query: 61  HLLI---------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120
           H LI         GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD
Sbjct: 61  HFLIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120

Query: 121 PQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ-PQ 180
           PQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ PQ
Sbjct: 121 PQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQ 180

Query: 181 QPGTGGGAA----AGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
           QP T GGAA     GGW F  +KANGSTSSSTS+E  P ITP+GW
Sbjct: 181 QPSTSGGAATAAGGGGWHFPLNKANGSTSSSTSMENTPTITPTGW 220

[Close]

BLAST of Moc01g24080 vs. NCBI nr
Match: XP_038882292.1 (transcription factor HEC3-like [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 5.1e-73
Identity = 168/219 (76.71%), Postives = 175/219 (79.91%), Query Frame = 0


Query: 11  SHHL-IQLSSMDDHRV------HDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHLLI- 70
           S HL +  S+M+DH +      H  DL+SIWP SFLP Q  D   QQL  PSSSTHLLI 
Sbjct: 10  SFHLDLDRSAMEDHHIGLHHHHHVPDLESIWP-SFLPFQLPDSHDQQL--PSSSTHLLIG 69

Query: 71  --------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIA 130
                   GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIA
Sbjct: 70  YSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIA 129

Query: 131 ARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ-PQQPGTG 190
           ARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ PQQP T 
Sbjct: 130 ARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQQPTTS 189

Query: 191 GGAA---AGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
           GGAA    GGWPF F KANGSTSSSTS+E  PAITPSGW
Sbjct: 190 GGAAGAGGGGWPFPFHKANGSTSSSTSMETTPAITPSGW 225

[Close]

BLAST of Moc01g24080 vs. NCBI nr
Match: KAG6604279.1 (Transcription factor IND, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034439.1 Transcription factor IND, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.5 bits (711), Expect = 4.8e-71
Identity = 166/232 (71.55%), Postives = 177/232 (76.29%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV-------------HDLDLDSIWPASFLPLQPHDPR 60
           MEP HLSN + H  +  S+M+DH +              D D DSIW +S LP    DP 
Sbjct: 1   MEPHHLSNPSPH--LHHSAMEDHHILHRHHHVHVHDPDPDPDPDSIW-SSLLPFHLPDPH 60

Query: 61  QQQLPSPSSSTHLLIG--------DDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKP 120
           QQ    PSSSTHLLI         D++EEPEEELG MKEMMYKIAAMQPVDIDPSTIRKP
Sbjct: 61  QQ---FPSSSTHLLISYATPSSRVDNDEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKP 120

Query: 121 KRRNVRISDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 180
           KRRNVRISDDPQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQI
Sbjct: 121 KRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 180

Query: 181 RLLQVS-QPQQPGTGGGAAAGGWPFTFDKANGSTSSSTSLE-APA-ITPSGW 209
           RLLQ S QPQQP T GGAAAGGWP TF KA+GS SSSTS+E  PA ITPSGW
Sbjct: 181 RLLQSSDQPQQPSTDGGAAAGGWPLTFHKADGSASSSTSMETTPAIITPSGW 226

[Close]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44
Identity = 107/176 (60.80%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSM-----DDHRVHDLDLDSIWPASFLPLQPHDPRQQQ----L 60
           M P    N+T +++I  S+      D H  H+ D   +    +  L   +P        L
Sbjct: 6   MNPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPL 65

Query: 61  PSPSSSTHLLIGD-----DEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120
            S  ++T LL GD     DEEEP EELG MKEMMYKIAAMQ VDIDP+T++KPKRRNVRI
Sbjct: 66  SSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRI 125

Query: 121 SDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 163
           SDDPQS+AAR RRERISE+IR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL
Sbjct: 126 SDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 5.5e-38
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 12  HHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQL-PSPSSSTHLLIGDDEEEPE 71
           HHL+    MD ++ +DL       A+FL    +DP    L P P +  HL   D++EE +
Sbjct: 36  HHLL----MDWNKANDLLTQE--HAAFL----NDPHHLMLDPPPETLIHL---DEDEEYD 95

Query: 72  EELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQ 131
           E++  MKEM Y IA MQPVDIDP+T+ KP RRNVRISDDPQ++ AR RRERISEKIR+L+
Sbjct: 96  EDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILK 155

Query: 132 RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 164
           R+VPGG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 156 RIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.3e-33
Identity = 89/195 (45.64%), Postives = 114/195 (58.46%), Query Frame = 0


Query: 3   PPHLSNF----TSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLP------ 62
           P H SN       H+++ LS  + H           P  F P   H P  Q +P      
Sbjct: 19  PEHFSNSNPNPNPHNIMMLSESNTH-----------PFFFNPTHSHLPFDQTMPHHQPGL 78

Query: 63  ----SPSSSTHLLIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISD 122
               +PS S+ L            +  M+EM+++IA MQP+ IDP +++ PKR+NVRIS 
Sbjct: 79  NFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISK 138

Query: 123 DPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----V 180
           DPQS+AAR RRERISE+IR+LQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+    V
Sbjct: 139 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVV 198

[Close]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.1e-33
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 73  LGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQRL 132
           +  M+EM+++IA MQP+ IDP  ++ PKRRNVRIS DPQS+AAR RRERISE+IR+LQRL
Sbjct: 95  MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154

Query: 133 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 181
           VPGGTKMDTASMLDEAI YVKFLK+Q++ L   + Q   TGGG   GG
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSL---EEQAVVTGGGGGGGG 199

[Close]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.8e-28
Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 42  QPHDPRQQQLPSPSSSTHLLIGDDEEEPE-EELGVMKEMMYKIAAMQPVDIDPSTIRKPK 101
           +P   +++   S  S  H     D  EP+ E +  MKEM+Y+ AA +PV+     + KPK
Sbjct: 210 KPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPK 269

Query: 102 RRNVRISDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 161
           R+NV+IS DPQ++AAR RRERISEKIRVLQ LVPGGTKMDTASMLDEA  Y+KFL+ Q++
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVK 329

Query: 162 LLQVSQPQ 169
            L+  +P+
Sbjct: 330 ALENLRPK 337

[Close]

BLAST of Moc01g24080 vs. ExPASy TrEMBL
Match: A0A6J1BUV7 (transcription factor HEC3-like OS=Momordica charantia OX=3673 GN=LOC111005913 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.7e-111
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL 60
           MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL
Sbjct: 1   MEPPHLSNFTSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLPSPSSSTHL 60

Query: 61  LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE 120
           LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE
Sbjct: 61  LIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRE 120

Query: 121 RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 180
           RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG
Sbjct: 121 RISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 180

Query: 181 WPFTFDKANGSTSSSTSLEAPAITPSGW 209
           WPFTFDKANGSTSSSTSLEAPAITPSGW
Sbjct: 181 WPFTFDKANGSTSSSTSLEAPAITPSGW 208

[Close]

BLAST of Moc01g24080 vs. ExPASy TrEMBL
Match: A0A5A7SM52 (Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1230G00250 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74
Identity = 168/225 (74.67%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV--HDLDLDSIWPASFLPLQPHDPRQQQLPSPSSST 60
           M+P HLSN   H  +  S+MDDH +  H  DLDSIWP SFLP Q  D   QQL  P+SST
Sbjct: 1   MDPHHLSNPPPH--LDRSAMDDHHILHHVHDLDSIWP-SFLPFQLSDHHDQQL--PTSST 60

Query: 61  HLLI---------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120
           H LI         GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD
Sbjct: 61  HFLIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120

Query: 121 PQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ-PQ 180
           PQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ PQ
Sbjct: 121 PQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQ 180

Query: 181 QPGTGGGAA----AGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
           QP T GGAA     GGW F  +KANGSTSSSTS+E  P ITP+GW
Sbjct: 181 QPSTSGGAATAAGGGGWHFPLNKANGSTSSSTSMENTPTITPTGW 220

[Close]

BLAST of Moc01g24080 vs. ExPASy TrEMBL
Match: A0A0A0KHS6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G483450 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74
Identity = 168/228 (73.68%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV-----HDLDLDSIWPASFLPLQPHDPRQQQLPSPS 60
           M+P HLSN   H  +  S+MDDH +     H  DLDSIWP SFLP Q  D   QQL  P+
Sbjct: 1   MDPHHLSNPPPH--LDRSAMDDHHILHHHHHVHDLDSIWP-SFLPFQLSDHHDQQL--PT 60

Query: 61  SSTHLLI---------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120
           SSTH +I         GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI
Sbjct: 61  SSTHFVIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120

Query: 121 SDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ 180
           SDDPQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ
Sbjct: 121 SDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQ 180

Query: 181 -PQQPGTGGGA----AAGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
            PQQP T GGA      GGW F F+KANGSTSSSTS+E  PAITP+GW
Sbjct: 181 PPQQPSTSGGATTAGGGGGWHFPFNKANGSTSSSTSMENTPAITPTGW 223

[Close]

BLAST of Moc01g24080 vs. ExPASy TrEMBL
Match: A0A1S4DTA8 (transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103485271 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.8e-74
Identity = 168/225 (74.67%), Postives = 177/225 (78.67%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV--HDLDLDSIWPASFLPLQPHDPRQQQLPSPSSST 60
           M+P HLSN   H  +  S+MDDH +  H  DLDSIWP SFLP Q  D   QQL  P+SST
Sbjct: 1   MDPHHLSNPPPH--LDRSAMDDHHILHHVHDLDSIWP-SFLPFQLSDHHDQQL--PTSST 60

Query: 61  HLLI---------GDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120
           H LI         GDDEEEPEEELG MKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD
Sbjct: 61  HFLIGYSTPSSGTGDDEEEPEEELGAMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDD 120

Query: 121 PQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQ-PQ 180
           PQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ SQ PQ
Sbjct: 121 PQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSSQPPQ 180

Query: 181 QPGTGGGAA----AGGWPFTFDKANGSTSSSTSLE-APAITPSGW 209
           QP T GGAA     GGW F  +KANGSTSSSTS+E  P ITP+GW
Sbjct: 181 QPSTSGGAATAAGGGGWHFPLNKANGSTSSSTSMENTPTITPTGW 220

[Close]

BLAST of Moc01g24080 vs. ExPASy TrEMBL
Match: A0A6J1GFF7 (transcription factor IND-like OS=Cucurbita moschata OX=3662 GN=LOC111453678 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.7e-71
Identity = 166/236 (70.34%), Postives = 177/236 (75.00%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSMDDHRV-----------------HDLDLDSIWPASFLPLQP 60
           MEP HLSN + H  +  S+M+DH +                  D D DSIW +S LP   
Sbjct: 1   MEPHHLSNPSPH--LHHSAMEDHHILHRHHHVHVHDPDPDPDPDPDPDSIW-SSLLPFHL 60

Query: 61  HDPRQQQLPSPSSSTHLLIG--------DDEEEPEEELGVMKEMMYKIAAMQPVDIDPST 120
            DP QQ    PSSSTHLLI         D++EEPEEELG MKEMMYKIAAMQPVDIDPST
Sbjct: 61  PDPHQQ---FPSSSTHLLISYATPSSRVDNDEEPEEELGAMKEMMYKIAAMQPVDIDPST 120

Query: 121 IRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFL 180
           IRKPKRRNVRISDDPQSIAARLRRERISEKIR+LQRLVPGGTKMDTASMLDEAIRYVKFL
Sbjct: 121 IRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFL 180

Query: 181 KRQIRLLQVS-QPQQPGTGGGAAAGGWPFTFDKANGSTSSSTSLE-APA-ITPSGW 209
           KRQIRLLQ S QPQQP T GGAAAGGWP TF KA+GS SSSTS+E  PA ITPSGW
Sbjct: 181 KRQIRLLQSSDQPQQPSTDGGAAAGGWPLTFHKADGSASSSTSMETTPAIITPSGW 230

[Close]

BLAST of Moc01g24080 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 107/176 (60.80%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 1   MEPPHLSNFTSHHLIQLSSM-----DDHRVHDLDLDSIWPASFLPLQPHDPRQQQ----L 60
           M P    N+T +++I  S+      D H  H+ D   +    +  L   +P        L
Sbjct: 6   MNPSLFQNYTWNNIINSSNNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPL 65

Query: 61  PSPSSSTHLLIGD-----DEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRI 120
            S  ++T LL GD     DEEEP EELG MKEMMYKIAAMQ VDIDP+T++KPKRRNVRI
Sbjct: 66  SSSLTTTTLLSGDQEDDEDEEEPLEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRI 125

Query: 121 SDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 163
           SDDPQS+AAR RRERISE+IR+LQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL
Sbjct: 126 SDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of Moc01g24080 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-39
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 12  HHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQL-PSPSSSTHLLIGDDEEEPE 71
           HHL+    MD ++ +DL       A+FL    +DP    L P P +  HL   D++EE +
Sbjct: 36  HHLL----MDWNKANDLLTQE--HAAFL----NDPHHLMLDPPPETLIHL---DEDEEYD 95

Query: 72  EELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQ 131
           E++  MKEM Y IA MQPVDIDP+T+ KP RRNVRISDDPQ++ AR RRERISEKIR+L+
Sbjct: 96  EDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILK 155

Query: 132 RLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ 164
           R+VPGG KMDTASMLDEAIRY KFLKRQ+R+LQ
Sbjct: 156 RIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of Moc01g24080 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 89/195 (45.64%), Postives = 114/195 (58.46%), Query Frame = 0


Query: 3   PPHLSNF----TSHHLIQLSSMDDHRVHDLDLDSIWPASFLPLQPHDPRQQQLP------ 62
           P H SN       H+++ LS  + H           P  F P   H P  Q +P      
Sbjct: 19  PEHFSNSNPNPNPHNIMMLSESNTH-----------PFFFNPTHSHLPFDQTMPHHQPGL 78

Query: 63  ----SPSSSTHLLIGDDEEEPEEELGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISD 122
               +PS S+ L            +  M+EM+++IA MQP+ IDP +++ PKR+NVRIS 
Sbjct: 79  NFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISK 138

Query: 123 DPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQ----V 180
           DPQS+AAR RRERISE+IR+LQRLVPGGTKMDTASMLDEAI YVKFLK+Q++ L+    V
Sbjct: 139 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAVV 198

[Close]

BLAST of Moc01g24080 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.5e-34
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 73  LGVMKEMMYKIAAMQPVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRVLQRL 132
           +  M+EM+++IA MQP+ IDP  ++ PKRRNVRIS DPQS+AAR RRERISE+IR+LQRL
Sbjct: 95  MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 154

Query: 133 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLQVSQPQQPGTGGGAAAGG 181
           VPGGTKMDTASMLDEAI YVKFLK+Q++ L   + Q   TGGG   GG
Sbjct: 155 VPGGTKMDTASMLDEAIHYVKFLKKQVQSL---EEQAVVTGGGGGGGG 199

[Close]

BLAST of Moc01g24080 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-29
Identity = 68/128 (53.12%), Postives = 90/128 (70.31%), Query Frame = 0


Query: 42  QPHDPRQQQLPSPSSSTHLLIGDDEEEPE-EELGVMKEMMYKIAAMQPVDIDPSTIRKPK 101
           +P   +++   S  S  H     D  EP+ E +  MKEM+Y+ AA +PV+     + KPK
Sbjct: 210 KPRTEKERGGSSNISFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPK 269

Query: 102 RRNVRISDDPQSIAARLRRERISEKIRVLQRLVPGGTKMDTASMLDEAIRYVKFLKRQIR 161
           R+NV+IS DPQ++AAR RRERISEKIRVLQ LVPGGTKMDTASMLDEA  Y+KFL+ Q++
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVK 329

Query: 162 LLQVSQPQ 169
            L+  +P+
Sbjct: 330 ALENLRPK 337

The following BLAST results are available for this feature:

BLAST of Moc01g24080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133300.1	3.6e-111	100.00	transcription factor HEC3-like [Momordica charantia]	[more]
XP_004148648.2	7.8e-74	73.68	transcription factor HEC3 [Cucumis sativus] >KGN48364.1 hypothetical protein Csa...	[more]
XP_016899193.1	7.8e-74	74.67	PREDICTED: transcription factor HEC3-like [Cucumis melo] >KAA0025535.1 transcrip...	[more]
XP_038882292.1	5.1e-73	76.71	transcription factor HEC3-like [Benincasa hispida]	[more]
KAG6604279.1	4.8e-71	71.55	Transcription factor IND, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]

BLAST of Moc01g24080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXD8	1.8e-44	60.80	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	5.5e-38	59.48	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q9SND4	5.3e-33	45.64	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	9.1e-33	66.67	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q8S3D2	6.8e-28	53.13	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of Moc01g24080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUV7	1.7e-111	100.00	transcription factor HEC3-like OS=Momordica charantia OX=3673 GN=LOC111005913 PE...	[more]
A0A5A7SM52	3.8e-74	74.67	Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KHS6	3.8e-74	73.68	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G483450 PE=4 S...	[more]
A0A1S4DTA8	3.8e-74	74.67	transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103485271 PE=4 SV=1	[more]
A0A6J1GFF7	6.7e-71	70.34	transcription factor IND-like OS=Cucurbita moschata OX=3662 GN=LOC111453678 PE=4...	[more]

BLAST of Moc01g24080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09750.1	1.3e-45	60.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	3.9e-39	59.48	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	3.8e-34	45.64	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	6.5e-34	66.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	4.8e-29	53.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 112..161 e-value: 4.6E-12 score: 56.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 115..155 e-value: 1.7E-6 score: 27.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 106..155 score: 15.033775
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 109..170 e-value: 1.2E-10 score: 43.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 111..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..208
None	No IPR available	PANTHER	PTHR45914:SF7	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 47..176
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 47..176
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 107..163 e-value: 5.70732E-35 score: 116.337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g24080.1	Moc01g24080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity