Moc01g20090 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g20090
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionhigh mobility group B protein 1
Locationchr1: 14063567 .. 14067667 (-)
RNA-Seq ExpressionMoc01g20090
SyntenyMoc01g20090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACCGTATAATGGTAACCAATGGAATGAGATGCGACGGAGGTCGGCGGTGAAATGTTCAGCAAATAAAGAAATCAGAGCCGCCGGAGACAGCGACGATGTCGGAGAAATGATCGGATGCTTGAGAGGAAGAAGAAGCCCAACAGTCGGAGTAGTGAAAGAAAATCAAGGGAGGAGAAGGAGGTTACAAAATTTTGGGAGTTTTAGGATTTTTAATTTTGGAAGGTTGAATTAGCACAATTTTAGGGATTTAATATATTTTAATAATGATTTACCAATTTCCTATTTTAATAATGATTTAATATTGATATGGATATATTAATAATTTTTGTTATGGGTACCATCTAATTTCAGAATTATTTTAGACGAAATGTAAATTCTATACTTTGTACGTAATGAGGACTTCTAAATAGACGAGTAGTAATCCCAAAATAAAAAGAGGGAAAAAACCAAAAAAGTACATGGGTAATGGGCCATTGGCTATAATGGCCCTAAAGACCCGGAAGAGAAGATGTTGACTGGGCCGAGCGCCCAAAATCTTACACGTGTTAAACCGTGGAAGGTCACTGGACCGGGGGCCCAAATCCCACACGTGGGAGGATGTGGCACGTGCCACAGAATTATATAATATCTGTTGTCACTGTCTGTATGGGATCGCTTTGGCGGCAATGATCATTATTCATTTCCACAAAACCCAAAAGATAATTCCTTCGCGATCATATATTTATTTATATTCTTTCTTCCTATTTATTCTTTTAAAAAAATAAAAAATATCGCTCACCGGTTGTAGCCGGTCAAAGGTCGCTCTTTCGCGGGCTCGTCATCGTGTGGCGGCAAAATTTGCGTGTGTTACTGGTCCTTCCGGTTGCTCAAATCAATTTCCTTCTCTCCTCGGGTTCGAATTCAACTCTGGTTCTTTCTTTTGAACTGTTATCTCTCTCTCTCTCTCTGAAAAATCTTCAGTATTGATTCTCTGTTTTCTTTCCGATACCTTTTGGATCGGACGGCGTGGTTCCTCGAAGGTAATTGATTCTCTGCTTTCTAGATCTCTTCTCTTCTTTGTTTTCTCAGTTTTTTAGTTCCAGGTTTCCTCTAGTTCTGTTTGTTTGCGTGCAAATTTATCATCAGTTGAAGCTAATTTGTTGTGATTTTGAGGTTGTGTTCGTTTTCTTTTCCTTTAATTCTGTGGAAAATTATCGTTGTTGAGCTATATATGTTGTGTTTTTGTTTGTTTGTCTTCTTAATAATTGTTAGTGGAGTTGTTTAACTTCAACGGATGAGAGAACTGAAGAAAGAAGTAGCAGTAGGAATTAAGAACTTGAGTTTTGTTAAGTCAATTACATTTTAGGTTTCTTCTTCACTCTAATACTCAATCAGCGATTAAACAAGTGATTTTTCATGGTTGTAATACATAGGAATCTACCGAGTCTGCTTGTTCTTATTCCTTGTATCTTTTACTGTGAATTTTCCGTAGCTTGGGGATTATTGTTTGTCAATTTTAGAGATGGCTTTTGCAATTGAAATTTAGGGATTTTAGTCTCGCTTAGGTCTCTTTATTATTATTATTTTTTTAAAGGTTCGGTTAGGTCATTTATGTTCAAGAACATGTATACTATTACAATTGGCTATCACTCGATTTGTTTGCTTCTGGATGTTCATCAATTATTACGTATCGTGTATATATATATATATATGTTTCTGTAAGAAAAAGAACGGTTTCTAGAGGTTTACTTTCACTGCATTTCTGTCCTTTTGACATGTACTTTTATATTAGATACCGTGTTTGATTGATTCCTATCCAGGCTGTTTGAGGTACTGCTTTTCCTTATTTTCCTCAAATTGTTCTTGTCATGATTCTTGTGCGTGTAGGCTGTTGTTTTTTGAACTATTGGACTTGTAATAACTGGCCAGGATTATTATTCTTCTACTCAACTCGTAGTTATTCCGACAGGTATTTGCCTTGCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCGAAAGAAGCTTTGAAGCCAGTGGATGATAGGTAGCCTTTTGTTCATTGTTCCACCACGAATTTCATATCTTTTTGGACTGATAATATAAGACCTTGTAATTGTTTAGTTATGAATATCTGTGATCCATATGATTAGTATTGGTAGCTTGCTGACATCTATTTTCAGTGTATCGAATTTCCATCAAGTTTACGAGTTCTGTTGATGTCTAATAATATCTACACACTTGATGGTGTATACAGTGGTTACAGGAATTTTGTAGTGACGGATCATAAATATCTCTATTATTTTCAGAAAGGTTGGGAAGCGAAAGGCTGCCATTAAGGCTGACAAGAATAGCAAACGACCAACAAAGAAGGATTTGAAAGCCAAGAAAGATCCCAACAAACCTAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCCTGTTCGTATTTGGTTTTTACTGTCATTTCAGGCTGAAAACTACCTTTTCGATTTCTTTTAGGAAGAAAATCTTCTTAATATTGTTTAAATTTATGTAACAGAGAGGAGTTCAGAAAAGAGTTCAAAAGGGACAATCCTCATGTGAAGGCAGTATCTGCAGTACGTAACCAGTGAAATTGGCCTAAAGATGCCCACAACTTGATATGCAAATATAGAGTAAATTATTGACATTTTCCCCACATTTTCAGGTTGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTGAGTCATGCTGTAAGTATCGTCATGTATTACATAAAAATTGAAGCAGCCTTAAAATGATTGCCCTCATTTCCTTTTTCCTCCATGTATAATGTTGATGAATGGAATTCTGTTTCCAGAGGTTTTATGTTAAATTGGTGCTAAATCTTGGAACTTTATCTTGCCTTTGGATTAGGGTCACTGTCAATGATCTCGCATTGAATATCACATTTGATTTTTTTCTTTTCTTTTACCTGGACTCGGTCTCGGTCTTTCTTCTGCTTCTGTAATGGCATTTTCTTACTATCAATGTTGGGCAATATTCCATTTTAACTATACTTCTTTATTCTTGATCGGTTCTTAAGTTTATTTATTGGGTCTTCTCATTGAAAACTAACTTACTGGATTAAAAAGGAAAAAGCACCCTACGAAGCCAAGGCGGCTAAGAAGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGTAGGCATGCTCTGCATTTTGTGTATAAATTTATAAAAGAATGTGTTTGGCTAGCTTTTTGAGGGGAAAAAAAACTATTTCTAAGTAAAACACTTATTATATATAACACTTTTCCAGTTAAATGTTTCCTCTCAAAGCACTGACGTACTTTTTTTTTATATATTTTGAAAATTTCTCAAACCATTTTTATCATTGGAAATTGTAAAAGGCACTTTTTTTTTCACTCTTTAAATTCTTAACCAAACACTATTAATTTAAAAAAAAAAAAAACACTTTTGATCATCAATTACCACTTCAAAAGAGTACTTATATACTCTTCTTTGAATGGACAGGCCAGTGACGAAGAATCAGAGAGGTCGAAATCTGAAGTGAACGATGAGGACGAGGCCAGTGAGGAGGTATTTTTAATGCAAATGTGATACTTGTACAGCGTTTCAGTGCATAATAAGCAAATTCAGATTCTTTTTGCTGTTTTTCTTGCTCATATTTCATTTTAAAATATAAACCTCATTGTTCGAAGTTGGAAAGTAAAAAGAAGTTTATATTCTCTTGAGAATCTTAGCAACTGGCAGCCTGATTTGGAAAATGCCCACCGCAATTAACAAGAATGCATTAGAAGGCATGGATTTGGTATATAATATAAGTTATATATATATATATATATATATATTCTGTTTCCCAATTGAAAATTGTCACGACCGATCAGTTTACTACTGCTGCTTCATGATCGAGCAAATTGAAACTGGAATGTGATTGAGAAACGCTTTCAAATCATCCAAAAAATACTTTCCAGCTATACCTATTTAGTTTATTTCCCAGACTATGAATCATTTCCCTCATCTATTTGCAGGAACATCAAGATGATGATGATGATGCAGAGGAAGATGATGAAGATGACGAAGATGAAGATGATGACTAG

mRNA sequence

ATGTTACCGTATAATGGTAACCAATGGAATGAGATGCGACGGAGGTCGGCGGTGAAATGTTCAGCAAATAAAGAAATCAGAGCCGCCGGAGACAGCGACGATGTCGGAGAAATGATCGGATGCTTGAGAGGAAGAAGAAGCCCAACAGTCGGAGTAGTGAAAGAAAATCAAGGGAGGAGAAGGAGGTATTTGCCTTGCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCGAAAGAAGCTTTGAAGCCAGTGGATGATAGAAAGGTTGGGAAGCGAAAGGCTGCCATTAAGGCTGACAAGAATAGCAAACGACCAACAAAGAAGGATTTGAAAGCCAAGAAAGATCCCAACAAACCTAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCCTAGAGGAGTTCAGAAAAGAGTTCAAAAGGGACAATCCTCATGTGAAGGCAGTATCTGCAGTTGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTGAGTCATGCTGAAAAAGCACCCTACGAAGCCAAGGCGGCTAAGAAGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGTGACGAAGAATCAGAGAGGTCGAAATCTGAAGTGAACGATGAGGACGAGGCCAGTGAGGAGGAACATCAAGATGATGATGATGATGCAGAGGAAGATGATGAAGATGACGAAGATGAAGATGATGACTAG

Coding sequence (CDS)

ATGTTACCGTATAATGGTAACCAATGGAATGAGATGCGACGGAGGTCGGCGGTGAAATGTTCAGCAAATAAAGAAATCAGAGCCGCCGGAGACAGCGACGATGTCGGAGAAATGATCGGATGCTTGAGAGGAAGAAGAAGCCCAACAGTCGGAGTAGTGAAAGAAAATCAAGGGAGGAGAAGGAGGTATTTGCCTTGCATAATGAAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCGAAAGAAGCTTTGAAGCCAGTGGATGATAGAAAGGTTGGGAAGCGAAAGGCTGCCATTAAGGCTGACAAGAATAGCAAACGACCAACAAAGAAGGATTTGAAAGCCAAGAAAGATCCCAACAAACCTAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCCTAGAGGAGTTCAGAAAAGAGTTCAAAAGGGACAATCCTCATGTGAAGGCAGTATCTGCAGTTGGAAAAGCTGGAGGAGAGAAGTGGAAATCCTTGAGTCATGCTGAAAAAGCACCCTACGAAGCCAAGGCGGCTAAGAAGAAGGCTGAATATGAAAAGCTTATGAGGGCATATGACAGCAAGAAGGCCAGTGACGAAGAATCAGAGAGGTCGAAATCTGAAGTGAACGATGAGGACGAGGCCAGTGAGGAGGAACATCAAGATGATGATGATGATGCAGAGGAAGATGATGAAGATGACGAAGATGAAGATGATGACTAG

Protein sequence

MLPYNGNQWNEMRRRSAVKCSANKEIRAAGDSDDVGEMIGCLRGRRSPTVGVVKENQGRRRRYLPCIMKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLMRAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD
Homology
[Close]
BLAST of Moc01g20090 vs. NCBI nr
Match: XP_022151579.1 (high mobility group B protein 1 [Momordica charantia] >XP_022151580.1 high mobility group B protein 1 [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 5.8e-73
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM
Sbjct: 61  AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 120

Query: 188 RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD 239
           RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD
Sbjct: 121 RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD 171

[Close]
BLAST of Moc01g20090 vs. NCBI nr
Match: XP_011653690.1 (high mobility group B protein 1 [Cucumis sativus] >XP_011653691.1 high mobility group B protein 1 [Cucumis sativus] >XP_031740703.1 high mobility group B protein 1 [Cucumis sativus] >KGN54377.1 hypothetical protein Csa_017866 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 3.8e-64
Identity = 152/169 (89.94%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK  KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGIKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDE 234
           RAYDSKKAS   DEESERSKSEVNDEDEASEEEHQ+DDD+ +EDDE+D+
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDDDEEDEDDEEDD 169

[Close]
BLAST of Moc01g20090 vs. NCBI nr
Match: XP_008449957.1 (PREDICTED: high mobility group B protein 1 [Cucumis melo] >XP_008449965.1 PREDICTED: high mobility group B protein 1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-63
Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK +KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDED 237
           RAYDSKKAS   DEESERSKSEVNDEDEASEEEHQ++DD  EED+EDDED+D
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEEDD--EEDEEDDEDDD 170

[Close]
BLAST of Moc01g20090 vs. NCBI nr
Match: XP_038883904.1 (high mobility group B protein 1 [Benincasa hispida] >XP_038883905.1 high mobility group B protein 1 [Benincasa hispida] >XP_038883906.1 high mobility group B protein 1 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 9.3e-63
Identity = 155/174 (89.08%), Postives = 165/174 (94.83%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKAA+KADK   RPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGVNRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEA+AAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEARAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD 239
           +AYDSKKAS   DEESERSKSEVNDEDEASEEEHQ+DDD   EDD++DEDEDDD
Sbjct: 121 KAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDDD---EDDDEDEDEDDD 171

[Close]
BLAST of Moc01g20090 vs. NCBI nr
Match: KAA0031875.1 (high mobility group B protein 1 [Cucumis melo var. makuwa] >TYK09515.1 high mobility group B protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 3.5e-62
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK +KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEE 217
           RAYDSKKAS   DEESERSKSEVNDEDEASEE
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEE 152

[Close]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 116/180 (64.44%), Postives = 144/180 (80.00%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MK +KGK   + +KEALKPVDDRKVGKRKA   A+K +KR T+K+ KAKKDPNKPKR PS
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKA--PAEKPTKRETRKEKKAKKDPNKPKRAPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLE+FR  FK++NP+VKAVSAVGKAGG+KWKS+S AEKAPYE KAAK+KAEYEK M
Sbjct: 61  AFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 120

Query: 188 RAYDSK-KASDEESERSKSEVNDEDEASEEEH--------QDDDDDAEEDDEDDEDEDDD 239
            AY+   +   +ESE+S+SE+NDEDEAS EE          D++++ EEDD+DD+DE++D
Sbjct: 121 DAYNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178

[Close]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match: P26585 (HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 90/163 (55.21%), Postives = 111/163 (68.10%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKG K K  S+ +   L       V K+ AA KA    ++P  K  KA KDPNKPKRPPS
Sbjct: 1   MKGGKSKTESKRADPKL------AVNKKGAATKA----RKPAGKG-KAAKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVF+EEFRK F +++P  KAVSAVGKA G KWK++S AEKAPY AK+ K+K EYEK M
Sbjct: 61  AFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNM 120

Query: 188 RAYDSKKA------SDEESERSKSEVNDEDEASEEEHQDDDDD 225
           RAY+ K+A       +EESE+S SEVNDED+  E   +++DDD
Sbjct: 121 RAYNKKQAEGPTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 152

[Close]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKG K KG S+ ++  L       V K+ AA  A K  K+P K   K  KDPNKPKRPPS
Sbjct: 1   MKGGKSKGESKKAETKL------AVNKKGAA--ATKGGKKPAKG--KEPKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVF+ +FR+++K+D+P+ K+V+AVGKA GE+WKSLS  EKAPY  +A KKK EYE  +
Sbjct: 61  AFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITL 120

Query: 188 RAYDSK---KASDEESERSKSEVNDEDEASEEEHQDDDD 224
           +AY+ K   K  +E S++SKSEVNDEDE  E+E  +DDD
Sbjct: 121 QAYNKKLEGKDDEEGSDKSKSEVNDEDEDEEDEEDEDDD 149

[Close]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-25
Identity = 80/140 (57.14%), Postives = 101/140 (72.14%), Query Frame = 0 

Query: 91  KVGKRKAAIKADKNS--KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEFKRDNPHVK 150
           K  K KA  ++ K S  K+P K    A KDPNKPKRP SAFFVF+E+FR  +K ++P  K
Sbjct: 2   KGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNK 61

Query: 151 AVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLMRAYDSK----KASDEESERSK 210
           +V+AVGKAGGEKWKSLS +EKAPY AKA K+K EYEK M+AY+ K       DEES++S 
Sbjct: 62  SVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSV 121

Query: 211 SEVNDEDEASEEEHQDDDDD 225
           SEVNDED+A +   +++DDD
Sbjct: 122 SEVNDEDDAEDGSEEEEDDD 141

[Close]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 80/161 (49.69%), Postives = 106/161 (65.84%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKG+K K  +R SK ++     +  G+ KA                 A KDPNKPKRP S
Sbjct: 1   MKGAKSKTETRSSKLSVTKKPAKGAGRGKA-----------------AAKDPNKPKRPAS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVF+E+FR+ FK++NP  K+V+ VGKA G+KWKSLS +EKAPY AKA K+K EYEK +
Sbjct: 61  AFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 120

Query: 188 RAYDSK----KASDEESERSKSEVNDEDEASEEEHQDDDDD 225
           +AY+ K       DEES++S SEVNDED+A +   +++DDD
Sbjct: 121 KAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 144

[Close]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match: A0A6J1DBK9 (high mobility group B protein 1 OS=Momordica charantia OX=3673 GN=LOC111019485 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.8e-73
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM
Sbjct: 61  AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 120

Query: 188 RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD 239
           RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD
Sbjct: 121 RAYDSKKASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDEDDD 171

[Close]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match: A0A0A0L1B2 (HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G309150 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.8e-64
Identity = 152/169 (89.94%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK  KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGIKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDE 234
           RAYDSKKAS   DEESERSKSEVNDEDEASEEEHQ+DDD+ +EDDE+D+
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDDDEEDEDDEEDD 169

[Close]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match: A0A1S3BML2 (high mobility group B protein 1 OS=Cucumis melo OX=3656 GN=LOC103491684 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.0e-64
Identity = 155/172 (90.12%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK +KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDED 237
           RAYDSKKAS   DEESERSKSEVNDEDEASEEEHQ++DD  EED+EDDED+D
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEEDD--EEDEEDDEDDD 170

[Close]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match: A0A5A7SRU9 (High mobility group B protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold994G00070 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.7e-62
Identity = 141/152 (92.76%), Postives = 147/152 (96.71%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKGSKGKGTSRVSKEALKPVDDRKVGKRKA +KADK +KRPTKKDLKAKKDPNKPKRPPS
Sbjct: 1   MKGSKGKGTSRVSKEALKPVDDRKVGKRKAVVKADKGTKRPTKKDLKAKKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFRKE+KR+NP+VKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEE 217
           RAYDSKKAS   DEESERSKSEVNDEDEASEE
Sbjct: 121 RAYDSKKASAADDEESERSKSEVNDEDEASEE 152

[Close]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match: A0A6J1ISM4 (high mobility group B protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478326 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 5.7e-58
Identity = 143/172 (83.14%), Postives = 160/172 (93.02%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKG KGKGTSRVSKEALKPVDDRKVGKRKAAIKADK  KRPTKK+LKA KDPNKPKRPPS
Sbjct: 1   MKGPKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKGIKRPTKKELKALKDPNKPKRPPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLEEFR+E+KR+NP+VKAVSAVGKAGG++W+SL+H EKAPYEAKAAK+KAEYEKLM
Sbjct: 61  AFFVFLEEFRQEYKRENPNVKAVSAVGKAGGQRWQSLTHDEKAPYEAKAAKRKAEYEKLM 120

Query: 188 RAYDSKKAS---DEESERSKSEVNDEDEASEEEHQDDDDDAEEDDEDDEDED 237
           RAYDSKKAS   DEE ERSKSEVN ED+ASEEEH +DD++ EE+DEDDE++D
Sbjct: 121 RAYDSKKASEADDEELERSKSEVNGEDDASEEEHHEDDEEEEEEDEDDEEDD 172

[Close]
BLAST of Moc01g20090 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 )

HSP 1 Score: 179.9 bits (455), Expect = 2.5e-45
Identity = 114/163 (69.94%), Postives = 135/163 (82.82%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MK +KGK   + +KEALKPVDDRKVGKRKA   A+K +KR T+K+ KAKKDPNKPKR PS
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKA--PAEKPTKRETRKEKKAKKDPNKPKRAPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLE+FR  FK++NP+VKAVSAVGKAGG+KWKS+S AEKAPYE KAAK+KAEYEK M
Sbjct: 61  AFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 120

Query: 188 RAYDSK-KASDEESERSKSEVNDEDEASEEEHQDDDDDAEEDD 230
            AY+   +   +ESE+S+SE+NDEDEAS EE  DDDDD EE+D
Sbjct: 121 DAYNKNLEEGSDESEKSRSEINDEDEASGEEEDDDDDDDEEED 161

[Close]
BLAST of Moc01g20090 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-42
Identity = 116/180 (64.44%), Postives = 144/180 (80.00%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MK +KGK   + +KEALKPVDDRKVGKRKA   A+K +KR T+K+ KAKKDPNKPKR PS
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKA--PAEKPTKRETRKEKKAKKDPNKPKRAPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLE+FR  FK++NP+VKAVSAVGKAGG+KWKS+S AEKAPYE KAAK+KAEYEK M
Sbjct: 61  AFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 120

Query: 188 RAYDSK-KASDEESERSKSEVNDEDEASEEEH--------QDDDDDAEEDDEDDEDEDDD 239
            AY+   +   +ESE+S+SE+NDEDEAS EE          D++++ EEDD+DD+DE++D
Sbjct: 121 DAYNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178

[Close]
BLAST of Moc01g20090 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 167.9 bits (424), Expect = 9.7e-42
Identity = 116/180 (64.44%), Postives = 144/180 (80.00%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MK +KGK   + +KEALKPVDDRKVGKRKA   A+K +KR T+K+ KAKKDPNKPKR PS
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKA--PAEKPTKRETRKEKKAKKDPNKPKRAPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLE+FR  FK++NP+VKAVSAVGKAGG+KWKS+S AEKAPYE KAAK+KAEYEK M
Sbjct: 61  AFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 120

Query: 188 RAYDSK-KASDEESERSKSEVNDEDEASEEEH--------QDDDDDAEEDDEDDEDEDDD 239
            AY+   +   +ESE+S+SE+NDEDEAS EE          D++++ EEDD+DD+DE++D
Sbjct: 121 DAYNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178

[Close]
BLAST of Moc01g20090 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 162.9 bits (411), Expect = 3.1e-40
Identity = 116/183 (63.39%), Postives = 142/183 (77.60%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MK +KGK   + +KEALKPVDDRKVGKRKA   A+K +KR T+K+ KAKKDPNKPKR PS
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKA--PAEKPTKRETRKEKKAKKDPNKPKRAPS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVFLE+FR  FK++NP+VKAVSAVGKAGG+KWKS+S AEKAPYE KAAK+KAEYEK M
Sbjct: 61  AFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 120

Query: 188 RAYDSK-KASDEESERSKSEVNDEDEASEE-----------EHQDDDDDAEEDDEDDEDE 239
            AY+   +   +ESE+S+SE+NDEDEAS E           E +   DD EE++E+D+D+
Sbjct: 121 DAYNKNLEEGSDESEKSRSEINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDD 180

[Close]
BLAST of Moc01g20090 vs. TAIR 10
Match: AT1G20693.2 (high mobility group B2 )

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 80/159 (50.31%), Postives = 104/159 (65.41%), Query Frame = 0 

Query: 68  MKGSKGKGTSRVSKEALKPVDDRKVGKRKAAIKADKNSKRPTKKDLKAKKDPNKPKRPPS 127
           MKG+K K  +R SK ++     +  G+ KA                 A KDPNKPKRP S
Sbjct: 1   MKGAKSKTETRSSKLSVTKKPAKGAGRGKA-----------------AAKDPNKPKRPAS 60

Query: 128 AFFVFLEEFRKEFKRDNPHVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKKKAEYEKLM 187
           AFFVF+E+FR+ FK++NP  K+V+ VGKA G+KWKSLS +EKAPY AKA K+K EYEK +
Sbjct: 61  AFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 120

Query: 188 RAYDSK----KASDEESERSKSEVNDEDEASEEEHQDDD 223
           +AY+ K       DEES++S SEVNDED+A +   +DDD
Sbjct: 121 KAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEDDD 142

The following BLAST results are available for this feature:
BLAST of Moc01g20090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151579.15.8e-73100.00high mobility group B protein 1 [Momordica charantia] >XP_022151580.1 high mobil... [more]
XP_011653690.13.8e-6489.94high mobility group B protein 1 [Cucumis sativus] >XP_011653691.1 high mobility ... [more]
XP_008449957.11.4e-6390.12PREDICTED: high mobility group B protein 1 [Cucumis melo] >XP_008449965.1 PREDIC... [more]
XP_038883904.19.3e-6389.08high mobility group B protein 1 [Benincasa hispida] >XP_038883905.1 high mobilit... [more]
KAA0031875.13.5e-6292.76high mobility group B protein 1 [Cucumis melo var. makuwa] >TYK09515.1 high mobi... [more]
BLAST of Moc01g20090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O495951.4e-4064.44High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV... [more]
P265851.1e-2655.21HMG1/2-like protein OS=Glycine max OX=3847 PE=2 SV=1[more]
P406203.2e-2654.09HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1[more]
P930476.1e-2557.14High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV... [more]
O495968.0e-2549.69High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV... [more]
BLAST of Moc01g20090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DBK92.8e-73100.00high mobility group B protein 1 OS=Momordica charantia OX=3673 GN=LOC111019485 P... [more]
A0A0A0L1B21.8e-6489.94HMG box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G309150 PE=... [more]
A0A1S3BML27.0e-6490.12high mobility group B protein 1 OS=Cucumis melo OX=3656 GN=LOC103491684 PE=3 SV=... [more]
A0A5A7SRU91.7e-6292.76High mobility group B protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A6J1ISM45.7e-5883.14high mobility group B protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478326... [more]
BLAST of Moc01g20090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G51880.42.5e-4569.94high mobility group B1 [more]
AT3G51880.19.7e-4264.44high mobility group B1 [more]
AT3G51880.39.7e-4264.44high mobility group B1 [more]
AT3G51880.23.1e-4063.39high mobility group B1 [more]
AT1G20693.22.0e-2650.31high mobility group B2 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 121..192
e-value: 2.5E-24
score: 96.8
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 122..190
e-value: 3.4E-23
score: 81.8
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 122..191
score: 19.465244
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 94..207
e-value: 5.7E-25
score: 89.5
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 114..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..209
NoneNo IPR availablePANTHERPTHR46261:SF1HIGH MOBILITY GROUP B PROTEIN 1coord: 68..227
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 122..168
e-value: 1.65401E-10
score: 53.4006
IPR031061High mobility group protein HMGB, plantPANTHERPTHR46261HIGH MOBILITY GROUP B PROTEIN 4-RELATEDcoord: 68..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g20090.1Moc01g20090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006333 chromatin assembly or disassembly
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0030527 structural constituent of chromatin