Moc01g18380 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g18380
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H-like superfamily protein
Locationchr1: 12669335 .. 12670078 (+)
RNA-Seq ExpressionMoc01g18380
SyntenyMoc01g18380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATGGAGAACTCGAGCCTAACGTCCTCTTCTAACAAGGAGTACAATAGCAAATGGTGGAAAACTTTTTGGAAAATAACAGTTCTTCCCAAAATCAAAATCTGTTGTTGGAAGCTTTATCACGATATCATTCCCACCAAAACAAATTTGTGTAAAAGAGGAATTTCTACTAACTTTTTGTGTGGCTTGTGCAGGAAACAGGAGGAGACAATAGAGCATCTACTATGGGGATGCAAGGTAACAAAGCACCTTTGGGCTAAGTATATTCCTATTTATTCGTCCTGTTTTGTTTTGGACAGAACACAGCGGAAAGCTAAAGACTACTGGAGTTGGATCATTGACAACACAACTGAAGAAGAGACCGCTACTCGAATGATAATAGCATGGCAGATATGGGAGCACAAGAACAGAACAATTTTCAGAGGGGAAGCTCCAATTGAACAAGATCTATGCAATTCAATAGAGAAATTCCAAGCAGACGTCAAGCCAGATGAACAAAACTTCTCAACAACAGATATTCCGAGAATTAGAGGCAATTATCAGATCCGCATTGAATCAAATGAGGAAAGAAATAGAATAATCACTAGTTGGAGTCCTCCGCCTACGAATTTCTGGAAAATCAATACTGATGCTGCCTGGAATGAACATCGTGGTGTTGGAGGCTTGGGTTGGATCGTGCGAAATTGGAGAGGTGAAGCGATTCTTGCGGATGCTGTGAAACAGATCAATAAAATTTCTTGA

mRNA sequence

ATGGACATGGAGAACTCGAGCCTAACGTCCTCTTCTAACAAGGAGTACAATAGCAAATGGTGGAAAACTTTTTGGAAAATAACAGTTCTTCCCAAAATCAAAATCTGTTGTTGGAAGCTTTATCACGATATCATTCCCACCAAAACAAATTTGTGTAAAAGAGGAATTTCTACTAACTTTTTGTGTGGCTTGTGCAGGAAACAGGAGGAGACAATAGAGCATCTACTATGGGGATGCAAGGTAACAAAGCACCTTTGGGCTAAGTATATTCCTATTTATTCGTCCTGTTTTGTTTTGGACAGAACACAGCGGAAAGCTAAAGACTACTGGAGTTGGATCATTGACAACACAACTGAAGAAGAGACCGCTACTCGAATGATAATAGCATGGCAGATATGGGAGCACAAGAACAGAACAATTTTCAGAGGGGAAGCTCCAATTGAACAAGATCTATGCAATTCAATAGAGAAATTCCAAGCAGACGTCAAGCCAGATGAACAAAACTTCTCAACAACAGATATTCCGAGAATTAGAGGCAATTATCAGATCCGCATTGAATCAAATGAGGAAAGAAATAGAATAATCACTAGTTGGAGTCCTCCGCCTACGAATTTCTGGAAAATCAATACTGATGCTGCCTGGAATGAACATCGTGGTGTTGGAGGCTTGGGTTGGATCGTGCGAAATTGGAGAGGTGAAGCGATTCTTGCGGATGCTGTGAAACAGATCAATAAAATTTCTTGA

Coding sequence (CDS)

ATGGACATGGAGAACTCGAGCCTAACGTCCTCTTCTAACAAGGAGTACAATAGCAAATGGTGGAAAACTTTTTGGAAAATAACAGTTCTTCCCAAAATCAAAATCTGTTGTTGGAAGCTTTATCACGATATCATTCCCACCAAAACAAATTTGTGTAAAAGAGGAATTTCTACTAACTTTTTGTGTGGCTTGTGCAGGAAACAGGAGGAGACAATAGAGCATCTACTATGGGGATGCAAGGTAACAAAGCACCTTTGGGCTAAGTATATTCCTATTTATTCGTCCTGTTTTGTTTTGGACAGAACACAGCGGAAAGCTAAAGACTACTGGAGTTGGATCATTGACAACACAACTGAAGAAGAGACCGCTACTCGAATGATAATAGCATGGCAGATATGGGAGCACAAGAACAGAACAATTTTCAGAGGGGAAGCTCCAATTGAACAAGATCTATGCAATTCAATAGAGAAATTCCAAGCAGACGTCAAGCCAGATGAACAAAACTTCTCAACAACAGATATTCCGAGAATTAGAGGCAATTATCAGATCCGCATTGAATCAAATGAGGAAAGAAATAGAATAATCACTAGTTGGAGTCCTCCGCCTACGAATTTCTGGAAAATCAATACTGATGCTGCCTGGAATGAACATCGTGGTGTTGGAGGCTTGGGTTGGATCGTGCGAAATTGGAGAGGTGAAGCGATTCTTGCGGATGCTGTGAAACAGATCAATAAAATTTCTTGA

Protein sequence

MDMENSSLTSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQEETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMIIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAVKQINKIS
Homology
BLAST of Moc01g18380 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 7.0e-29
Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = 0

Query: 66  RKQEETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATR 125
           RK+EET +H+LW CKV K +W    PI ++ F +DRT    K+YW W++D   EEE    
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190

Query: 126 MIIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRI 185
           MIIA QIWE +N++IF+G     +D+  +I+++  +    + N       + +  + IR 
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKR----KSKDFHPIRR 250

Query: 186 ESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAI 236
             +  R R    W PP +N WK+NTDAAW       G+GWI+R+ +GE I
Sbjct: 251 IGDNTRAR----WKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVI 292

BLAST of Moc01g18380 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 8.8e-24
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0

Query: 107 KDYWSWIIDNTTEEETATRMIIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDE 166
           KD W+W+++  ++EE AT M+IAWQIWE +NR+IFRGE   EQ L  SI  F        
Sbjct: 16  KDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKG 75

Query: 167 QNFSTTDIPRIRGNYQIRIESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWI 226
              S T   +    Y  R    E  N +   WS PPTN WK+NTDA+W+E R VGG+GWI
Sbjct: 76  TCISQTRRSQQNDGYLPR--GRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWI 135

Query: 227 VRNWRGEAILADAVK 242
           + + RGE +LA   K
Sbjct: 136 LCDCRGEIVLAGNCK 148

BLAST of Moc01g18380 vs. NCBI nr
Match: KAF4401718.1 (hypothetical protein G4B88_000766 [Cannabis sativa])

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-22
Identity = 71/232 (30.60%), Postives = 112/232 (48.28%), Query Frame = 0

Query: 9   TSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQ 68
           T SSN E   KWWK  W +++ P++K+  W++ H+ +P K NL  RG+  N  C LC  Q
Sbjct: 505 TRSSNMEDIHKWWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVNLNCDLCGHQ 564

Query: 69  EETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMII 128
            ET+ H LWGC   K +W K +P Y  C           D    + D+  + E    + I
Sbjct: 565 AETLTHALWGCAKVKTIW-KLVPWYHKC--AHFKNGSMFDIMVTLKDHLHKSEFEEAIKI 624

Query: 129 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 188
            W IWE++N+  +  + P+     N I+           ++ +T  P  R N + +  + 
Sbjct: 625 MWAIWENRNK--YWNKLPV----MNGIQLL---------DWISTAYPDSRNNKE-QPMNI 684

Query: 189 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAV 241
           + +++ +  W  PPT    +N DAA N      G G+I R++ G  +LA  V
Sbjct: 685 DMKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMV 717

BLAST of Moc01g18380 vs. NCBI nr
Match: KAF4399153.1 (hypothetical protein G4B88_023747 [Cannabis sativa])

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-22
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 0

Query: 9   TSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQ 68
           T SSN E   KWWK  W +++ P++K+  W++ H+ +P K NL  RG+  N  C LC  Q
Sbjct: 88  TRSSNMEDIHKWWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVNLSCDLCGHQ 147

Query: 69  EETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMII 128
            ET+ H LWGC   K +W K +P Y  C           D    + D+  + E    + I
Sbjct: 148 AETLTHALWGCAKVKTIW-KLVPWYHKC--AHFKNGSMFDIMVTLKDHLHKSEFEEAIKI 207

Query: 129 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 188
            W IWE++NR  +  + P+   +   +  +     PD +N              + I+  
Sbjct: 208 MWAIWENRNR--YWNKLPVMNGI--QLLDWIFTAYPDSRNSK---------EQTMNIDMK 267

Query: 189 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAV 241
            ++ +    W  PPT    +N DAA        G G+I R+W G  +LA  V
Sbjct: 268 HQQPK---KWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMV 300

BLAST of Moc01g18380 vs. NCBI nr
Match: RYR18269.1 (hypothetical protein Ahy_B03g062876 [Arachis hypogaea])

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-22
Identity = 71/243 (29.22%), Postives = 114/243 (46.91%), Query Frame = 0

Query: 4   ENSSLTSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCG 63
           E   +  +S  +   + W+  W++ V  K+++  WK  H I+P  TNL +R I+    C 
Sbjct: 303 EEGRICKASTSQDWREIWEAIWRLPVPQKVRMFLWKTVHRILPVNTNLHQRRITMTPTCS 362

Query: 64  LCRKQEETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIID-------- 123
           +C+K+ ETIEH L  C  T+ +W      + S   +  T    + +  WI+D        
Sbjct: 363 ICQKENETIEHALLLCPWTRAVW------FESSIQIVPTAYNVRSFREWIMDKIKRIKTE 422

Query: 124 -NTTEEETATRM-IIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTD 183
             + +E+T  ++  + W IW+ +N  IF+    I Q +    E   A+     Q  S  +
Sbjct: 423 SGSEQEKTLCKLGCVCWCIWKARNHHIFQQTEIIPQKVITQSEYLTAEFHKATQESSKAN 482

Query: 184 IPRI-RGNYQIRIESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRG 236
           IP   RG  + RI           +W PPP N  K+NTDAA+ +  G   L   VR+W+G
Sbjct: 483 IPDTGRGGVRKRI-----------TWRPPPKNRLKVNTDAAFYQDTGTAALAAKVRDWQG 528

BLAST of Moc01g18380 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.4e-08
Identity = 46/224 (20.54%), Postives = 93/224 (41.52%), Query Frame = 0

Query: 18  SKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQEETIEHLLW 77
           + ++   WK+ V  ++K   W + +  + T+    +R +S + +C +C+   E++ H+L 
Sbjct: 285 ASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLR 344

Query: 78  GCKVTKHLWAKYIPIYSSCFVLDRTQRK--AKDYWSWIIDNTTEEE-------TATRMII 137
            C     +W + +P         R Q+   +K  + W+ DN  +         +    +I
Sbjct: 345 DCPAQLGIWVRVVP--------QRRQQGFFSKSLFEWLYDNLGDRSGCEDIPWSTIFAVI 404

Query: 138 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 197
            W  W+ +   IF GE    +D    ++++  +V                GN  + I   
Sbjct: 405 IWWGWKWRCGNIF-GENTKCRDRVKFVKEWAVEVYRAHS-----------GNVLVGI--T 464

Query: 198 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRG 233
           + R   +  W  P   + K+NTD A   + G+   G ++R+  G
Sbjct: 465 QPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTG 486

BLAST of Moc01g18380 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29
Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = 0

Query: 66  RKQEETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATR 125
           RK+EET +H+LW CKV K +W    PI ++ F +DRT    K+YW W++D   EEE    
Sbjct: 131 RKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRS 190

Query: 126 MIIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRI 185
           MIIA QIWE +N++IF+G     +D+  +I+++  +    + N       + +  + IR 
Sbjct: 191 MIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKR----KSKDFHPIRR 250

Query: 186 ESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAI 236
             +  R R    W PP +N WK+NTDAAW       G+GWI+R+ +GE I
Sbjct: 251 IGDNTRAR----WKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVI 292

BLAST of Moc01g18380 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.3e-24
Identity = 62/135 (45.93%), Postives = 80/135 (59.26%), Query Frame = 0

Query: 107 KDYWSWIIDNTTEEETATRMIIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDE 166
           KD W+W+++  ++EE AT M+IAWQIWE +NR+IFRGE   EQ L  SI  F        
Sbjct: 16  KDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKG 75

Query: 167 QNFSTTDIPRIRGNYQIRIESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWI 226
              S T   +    Y  R    E  N +   WS PPTN WK+NTDA+W+E R VGG+GWI
Sbjct: 76  TCISQTRRSQQNDGYLPR--GRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWI 135

Query: 227 VRNWRGEAILADAVK 242
           + + RGE +LA   K
Sbjct: 136 LCDCRGEIVLAGNCK 148

BLAST of Moc01g18380 vs. ExPASy TrEMBL
Match: A0A7J6I3Y4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000766 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-23
Identity = 71/232 (30.60%), Postives = 112/232 (48.28%), Query Frame = 0

Query: 9   TSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQ 68
           T SSN E   KWWK  W +++ P++K+  W++ H+ +P K NL  RG+  N  C LC  Q
Sbjct: 505 TRSSNMEDIHKWWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVNLNCDLCGHQ 564

Query: 69  EETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMII 128
            ET+ H LWGC   K +W K +P Y  C           D    + D+  + E    + I
Sbjct: 565 AETLTHALWGCAKVKTIW-KLVPWYHKC--AHFKNGSMFDIMVTLKDHLHKSEFEEAIKI 624

Query: 129 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 188
            W IWE++N+  +  + P+     N I+           ++ +T  P  R N + +  + 
Sbjct: 625 MWAIWENRNK--YWNKLPV----MNGIQLL---------DWISTAYPDSRNNKE-QPMNI 684

Query: 189 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAV 241
           + +++ +  W  PPT    +N DAA N      G G+I R++ G  +LA  V
Sbjct: 685 DMKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMV 717

BLAST of Moc01g18380 vs. ExPASy TrEMBL
Match: A0A7J6HVA4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-23
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 0

Query: 9   TSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQ 68
           T SSN E   KWWK  W +++ P++K+  W++ H+ +P K NL  RG+  N  C LC  Q
Sbjct: 88  TRSSNMEDIHKWWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVNLSCDLCGHQ 147

Query: 69  EETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMII 128
            ET+ H LWGC   K +W K +P Y  C           D    + D+  + E    + I
Sbjct: 148 AETLTHALWGCAKVKTIW-KLVPWYHKC--AHFKNGSMFDIMVTLKDHLHKSEFEEAIKI 207

Query: 129 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 188
            W IWE++NR  +  + P+   +   +  +     PD +N              + I+  
Sbjct: 208 MWAIWENRNR--YWNKLPVMNGI--QLLDWIFTAYPDSRNSK---------EQTMNIDMK 267

Query: 189 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAV 241
            ++ +    W  PPT    +N DAA        G G+I R+W G  +LA  V
Sbjct: 268 HQQPK---KWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMV 300

BLAST of Moc01g18380 vs. ExPASy TrEMBL
Match: A0A803PR93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-23
Identity = 71/232 (30.60%), Postives = 112/232 (48.28%), Query Frame = 0

Query: 9   TSSSNKEYNSKWWKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQ 68
           T SSN E   KWWK  W +++ P++K+  W++ H+ +P K NL  RG+  N  C LC  Q
Sbjct: 132 TRSSNMEDIHKWWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVNLNCDLCGHQ 191

Query: 69  EETIEHLLWGCKVTKHLWAKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRMII 128
            ET+ H LWGC   K +W K +P Y  C           D    + D+  + E    + I
Sbjct: 192 AETLTHALWGCAKVKTIW-KLVPWYHKC--AHFKNGSMFDIMVTLKDHLHKSEFEEAIKI 251

Query: 129 AWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESN 188
            W IWE++N+  +  + P+     N I+           ++ +T  P  R N + +  + 
Sbjct: 252 MWAIWENRNK--YWNKLPV----MNGIQLL---------DWISTAYPDSRNNKE-QPMNI 311

Query: 189 EERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAV 241
           + +++ +  W  PPT    +N DAA N      G G+I R++ G  +LA  V
Sbjct: 312 DMKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMV 344

BLAST of Moc01g18380 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-18
Identity = 59/217 (27.19%), Postives = 96/217 (44.24%), Query Frame = 0

Query: 21  WKTFWKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQEETIEHLLWGCK 80
           ++  WK    PKI+   WK   + +P    L  R +S    C  C   +ET+ HLL+ C 
Sbjct: 254 YQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCT 313

Query: 81  VTKHLWA-KYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEE-ETATRMI--IAWQIWEHK 140
             +  WA   IPI       D        YW + + N   + E A++++  + W++W+++
Sbjct: 314 FARLTWAISSIPIPLGGEWADSIY--VNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNR 373

Query: 141 NRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESNEERNRIIT 200
           N  +FRG     Q++    E    + +   +  S    P++  +   R            
Sbjct: 374 NELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGR------------ 433

Query: 201 SWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGE 234
            W PPP  + K NTDA WN      G+GW++RN +GE
Sbjct: 434 -WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGE 455

BLAST of Moc01g18380 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.1e-11
Identity = 56/227 (24.67%), Postives = 91/227 (40.09%), Query Frame = 0

Query: 25  WKITVLPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQEETIEHLLWGCKVTKH 84
           W + ++PK+K   W+     + T   L  RG+  +  C  C ++ E+I H L+ C     
Sbjct: 163 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 222

Query: 85  LWAKYIPIYSSCFVLDRTQRKAKDY-------WSWIIDNTTEE-ETATRMIIAWQIWEHK 144
            W        S   L R Q  + D+        +++ D T  +      + + W+IW+ +
Sbjct: 223 AWR------LSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKAR 282

Query: 145 NRTIFR--GEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESNEERNRI 204
           N  +F    E+P +  L    E    D     Q+   T  P      QI        N+I
Sbjct: 283 NNVVFNKFRESPSKTVLSAKAETH--DWLNATQSHKKTPSP----TRQI------AENKI 342

Query: 205 ITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRGEAILADAVK 242
              W  PP  + K N DA ++  +     GWI+RN  G  I   ++K
Sbjct: 343 --EWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMK 369

BLAST of Moc01g18380 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09
Identity = 43/177 (24.29%), Postives = 71/177 (40.11%), Query Frame = 0

Query: 62  CGLCRKQEETIEHLLWGCKVTKHLWA-KYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEE 121
           C  C    ET+ HLL+ C   + +WA   IP Y      D           W+++   E 
Sbjct: 12  CVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANL----YWVLNLEVEI 71

Query: 122 ETATRM-----IIAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIP 181
               ++      + W++W+ +N  +F+G+   E D    + +   D     + +ST    
Sbjct: 72  PKLGKIGNLVPWLLWRLWKSRNELMFKGK---EYDAPEVLRRAMEDF----EEWST---- 131

Query: 182 RIRGNYQIRIESNEERNRIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRNWRG 233
             R   + +    +    +   W  PP  + K NTDA W       G+GWI+RN  G
Sbjct: 132 --RRELEGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESG 171

BLAST of Moc01g18380 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06
Identity = 37/126 (29.37%), Postives = 54/126 (42.86%), Query Frame = 0

Query: 116 NTTEEETATRMI---IAWQIWEHKNRTIFRGEAPIEQDLCNSIEKFQADVKPDEQNFSTT 175
           N +  +  TR +   + W+IW+  N  +F           ++  KFQ  V+      +  
Sbjct: 32  NDSRVDRVTRFMPFWLMWRIWKSGNDLVFN----------HTRTKFQTTVE-----MALN 91

Query: 176 DIPRIRGNYQIRIESNEERN---RIITSWSPPPTNFWKINTDAAWNEHRGVGGLGWIVRN 235
           D      N     + N  RN      T WSPP  +  K N DA+ +E   V GLGWI+RN
Sbjct: 92  DTKEWLDNTMTNEQQNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRN 142

BLAST of Moc01g18380 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06
Identity = 48/204 (23.53%), Postives = 79/204 (38.73%), Query Frame = 0

Query: 30  LPKIKICCWKLYHDIIPTKTNLCKRGISTNFLCGLCRKQEETIEHLLWGCKVTKHLW--- 89
           +PKIK+  WK     +P    L +R IS+ + C  C    ET  H+L+ C     +W   
Sbjct: 1   MPKIKLFLWKAAAGALPVGAQLVRRHISSTWDCARC-GAPETSTHMLFHCDFAAQVWNLA 60

Query: 90  ---AKYIPIYSSCFVLDRTQRKAKDYWSWIIDNTTEEETATRM-IIAWQIWEHKNRTIFR 149
                +IPI +         +K       I+       TAT    I W IW+ +N+ IF+
Sbjct: 61  PLQLGHIPIGTPILEALNLLKKT------IVLPPVGIHTATLFPWICWHIWKARNQLIFQ 120

Query: 150 GEAPIEQDLCNSIEKFQADVKPDEQNFSTTDIPRIRGNYQIRIESNEERNRIITSWSPPP 209
                   +  ++ K   D    +   +   +P++R        +    N   T      
Sbjct: 121 NS---HFSVIETVTKAVQDALAWQS--AQLALPKVR-------VATPRPNSTTTL----- 180

Query: 210 TNFWKINTDAAWNEHRGVGGLGWI 227
           T+ +    DAAW +   + G GW+
Sbjct: 181 THDFLCYVDAAWQQQSSLAGSGWV 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154990.17.0e-2938.82uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_022143317.18.8e-2445.93uncharacterized protein LOC111013216 [Momordica charantia][more]
KAF4401718.11.3e-2230.60hypothetical protein G4B88_000766 [Cannabis sativa][more]
KAF4399153.11.3e-2230.17hypothetical protein G4B88_023747 [Cannabis sativa][more]
RYR18269.12.2e-2229.22hypothetical protein Ahy_B03g062876 [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
P0C2F65.4e-0820.54Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1DL643.4e-2938.82uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CQG04.3e-2445.93uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A7J6I3Y46.2e-2330.60Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000766 PE=4 SV=1[more]
A0A7J6HVA46.2e-2330.17Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1[more]
A0A803PR936.2e-2330.60Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.14.5e-1827.19Ribonuclease H-like superfamily protein [more]
AT3G09510.14.1e-1124.67Ribonuclease H-like superfamily protein [more]
AT2G34320.12.3e-0924.29Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT5G65005.11.8e-0629.37Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT1G10000.14.0e-0623.53Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 12..86
e-value: 9.1E-18
score: 64.7
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 10..237
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 10..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g18380.1Moc01g18380.1mRNA