Moc01g17750 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g17750
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	10 kDa chaperonin, mitochondrial-like
Location	chr1: 12151849 .. 12153937 (+)
RNA-Seq Expression	Moc01g17750
Synteny	Moc01g17750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACGTTTGGTCCCGTTGCTGAATCGCGTTTTGATCGAGAAGATCGTGCCCCCTGCCAAAACCAACACTGGCATTTTGCTCCCTGAGAAGTCCAGTAAGGTAAATGCTCGTTCTTGTTCTGAAAAAAATTTGTTAATTGTTTTGTTTGCTGTGGAAATTTGTGGGAATCGAGTTTGCCGGAAATTTCGCCTTTTTTGTTTTCGTTATTTATGACCCAGATTCTGATATATGGTTTTTTCAAATGTTGTGACTTGTGACTTCAAATTTGGTGCTTGTGGATGCCATTTTGTTGTAGTTATTTGGTGTATACTTTCGTTTCCTGTCATCTATCTAGTTTAGTTATTAGTTGTTGTAATCGCCTATTTAAGAAGTATTGCATAATGTCTTGAAATGTGAGTATCCAATTCATTTCGTTTCATTTCCTTTACTAATTTCAATATTGGTGACTATTTCATTCCATGATTTTCTCCGAAAAGGGTATTGTGTTTGACTGGTGCAATATTCATTATCAACAGAAATCTTTGTTAGTTAAGAAGTTTTTTGAGTGGGAAAACCTTGCGGAGTAGTTTTGATTGAGGATTCCTCCTTCCATTGGTCTTTTTTGTGGTTGTTTCGTTCATGATAAATATTACTTGGATTATAGCTTGTAAAGTTTAATCTTACACTCCCTGCTCTGGAAGGACGAAATTTGAAAAAGTTGTCTTCATTAATTAGTATGTATAAAGTTGTTGTGAGTCTGTGACATTCAGCTTTGCATTATGAAATTGGTTGTTCACATATTGAGTGCCATTTGTACTGATTTTTTTCCTTGTCTAGTTGAACTCTGGAAAAGTTCTCTCTGTTGGTCCTGGAACTCGTGACAGAGAGGGAAACCTTATTCCAGTTACTGTAAAGGAAGGTGACACCGTCCTCCTGCCAGAATATGGAGGAACTGAAGTCAAACTTGGAGATAAGCAGTATGTATAGTATTAGTATACTTATTCTTTTTTACTTCTGTTGTTTATGGAATTTTAGGCCTGTTTGCTTAAGAATTTAGTTTAGAATTTAAACCAGGTAATTGGAAATAATCTTTAGTTCTGGTAGAGCCACCGCACATTGCACCATGTGGTCTAATAGTTACTATGATTTTTATTTTAATTTCTGTTGCTCTTAAAAATTCATGCTGAATATTTCAATGTTCTTGACATTTGTGTTTAATAGGGAGATCTTGTAGTGTGATGAGTTTATATTGTTGGTCATTGTACTGTGTTATAGTTAATTTAGATTTGTCTTGGATTAGTCAAGAAGAAATGTCTAATGGTGGTAATACGTCCTGACTCCTGTCTTTATTACTGCATAATTGGGCGGTTTCTAGTTAGTTTATGATGGTTTTTGACGGTCGGGTTAGACAATTTTATGAGATAGAGTAGTCATCTATACAGGGATTGTCTCCTTTCAGTAACTTGAAAAATTGTATCAATTTACTAGGACATGAACAAAGAGCAAAAAAACATGGGAATGATTTCTTGTTTGTCCTAATTTTAAAACAAATTCAATCATCATGCATGGCTCATTGGTCCAAAGGGACCAGGGTTAATTAAAAGGGAATAGGTTCAAATCCCATGACGGTCACCTACTTTAGGAATTAGTAATTCCTATGGGTTTTCGGTACTAAGGGTCAGGCGGTTGTCCCGTGAGATTAGTCGAGGTGCACGTAAGCTGGTCTGGACACTCACGGATAAATATTATTACTTGGAGATTTTGAATATAATCATCTCAGATCCTTTGTAAAGGTGAATTTCTGAGTAAATTAGAGTTTTCTTTATATTTTCAATATGGGTTGTCTTATACTTTGTTCTCAAATAACCAAAGAATGAAAAATTACAAAATGAAGTTGCTAGTTCTAGCAAGCATCAATTCTTCAATCTTTGTATTAGTAATTTAGTCTCAATTTCGTTCAATTGTTGTATTCATTTTGATGCTCTCCCATAACTGCATTTGCCTCATTTCTTTTGTATTTAGTCCCCGATGAATAATTTAACCATTGAATTTCAGGTTATATCTATTCCGTGACGAAGATCTATTAGGAACGCTGCATGAATAA

mRNA sequence

ATGGCGAAACGTTTGGTCCCGTTGCTGAATCGCGTTTTGATCGAGAAGATCGTGCCCCCTGCCAAAACCAACACTGGCATTTTGCTCCCTGAGAAGTCCAGTAAGTTGAACTCTGGAAAAGTTCTCTCTGTTGGTCCTGGAACTCGTGACAGAGAGGGAAACCTTATTCCAGTTACTGTAAAGGAAGGTGACACCGTCCTCCTGCCAGAATATGGAGGAACTGAAGTCAAACTTGGAGATAAGCAGTTATATCTATTCCGTGACGAAGATCTATTAGGAACGCTGCATGAATAA

Coding sequence (CDS)

ATGGCGAAACGTTTGGTCCCGTTGCTGAATCGCGTTTTGATCGAGAAGATCGTGCCCCCTGCCAAAACCAACACTGGCATTTTGCTCCCTGAGAAGTCCAGTAAGTTGAACTCTGGAAAAGTTCTCTCTGTTGGTCCTGGAACTCGTGACAGAGAGGGAAACCTTATTCCAGTTACTGTAAAGGAAGGTGACACCGTCCTCCTGCCAGAATATGGAGGAACTGAAGTCAAACTTGGAGATAAGCAGTTATATCTATTCCGTGACGAAGATCTATTAGGAACGCTGCATGAATAA

Protein sequence

MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTVKEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE

Homology

[Close]

BLAST of Moc01g17750 vs. NCBI nr
Match: XP_022154455.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. NCBI nr
Match: XP_038881343.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-42
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+S+GPG RDREG +IPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISIGPGARDREGKIIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLG+KQ YLFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. NCBI nr
Match: XP_022966634.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVIV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLG+KQ YLFRDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. NCBI nr
Match: XP_022931931.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6595428.1 10 kDa chaperonin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027431.1 10 kDa chaperonin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.3 bits (456), Expect = 8.2e-42
Identity = 88/97 (90.72%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLG+KQ YL+RDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. NCBI nr
Match: XP_008455733.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRL+PLLNRVLIEKIVPP KTN+GILLPEKSSKLNSGKV++VGPG RDREG +IP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGD VLLPEYGG EVKLG+KQ YLFRDEDLLGTLHE
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.7e-37
Identity = 70/97 (72.16%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          M KRL+P  NR+L+++++ PAKT +GILLPEKSSKLNSGKV++VGPG+RD++G LIPV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLG+ + +LFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.3e-37
Identity = 70/97 (72.16%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          M KRL+P  NR+L++ ++ PAKT +GILLPEK+SKLNSGKV++VGPG+RD++G LIPV+V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLG+K+ +LFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-18
Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 2   AKRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTV 61
           AK +VPLL+R+L+++I    KT +GI LPEKS  KL+ G+V+SVG G  ++EG L   +V
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62  KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
             GD VLLP YGG+ +K+G+++  L+RD +LL  + E
Sbjct: 68  AVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot
Match: Q9W6X3 (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.6e-18
Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 0


Query: 3  KRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTVK 62
          ++ +PL +RVL+E+++    T  GI+LPEKS  K+    V++VGPG+ +++G + P++VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLG 94
           G+ VLLP+YGGT+V L DK  +LFRD D+LG
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILG 95

[Close]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot
Match: P38910 (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HSP10 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-18
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 2   AKRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTV 61
           AK +VPL++RVL+++I   AKT +G+ LPEK+  KLN  +V++VGPG  D  GN +   V
Sbjct: 8   AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62  KEGDTVLLPEYGGTEVKLG-DKQLYLFRDEDLLGTL 96
           K GD VL+P++GG+ +KLG D ++ LFRD ++L  +
Sbjct: 68  KVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAKI 103

[Close]

BLAST of Moc01g17750 vs. ExPASy TrEMBL
Match: A0A6J1DJN1 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021728 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy TrEMBL
Match: A0A6J1HUD0 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466260 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVIV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLG+KQ YLFRDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy TrEMBL
Match: A0A6J1EUZ7 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438208 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.0e-42
Identity = 88/97 (90.72%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV V
Sbjct: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEG+TVLLPEYGGTEVKLG+KQ YL+RDEDLLGTLHE
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy TrEMBL
Match: A0A1S3C2U3 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 83/97 (85.57%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRL+PLLNRVLIEKIVPP KTN+GILLPEKSSKLNSGKV++VGPG RDREG +IP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGD VLLPEYGG EVKLG+KQ YLFRDEDLLGTLHE
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. ExPASy TrEMBL
Match: A0A6P5TYD6 (10 kDa chaperonin, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110772016 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 81/97 (83.51%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRLVPLLNRVL+E+IVPP+KT TGILLPEKS+KLNSGKV++VGPGTRD+EG+ IP TV
Sbjct: 1  MAKRLVPLLNRVLVERIVPPSKTTTGILLPEKSAKLNSGKVVAVGPGTRDKEGSFIPATV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGTEVKLGDK+ YL+RDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKEYYLYRDEDILGTLHD 97

[Close]

BLAST of Moc01g17750 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-38
Identity = 70/97 (72.16%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          M KRL+P  NR+L+++++ PAKT +GILLPEKSSKLNSGKV++VGPG+RD++G LIPV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGDTVLLPEYGGT+VKLG+ + +LFRDED+LGTLHE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Moc01g17750 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-38
Identity = 72/97 (74.23%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNTGILLPEKSSKLNSGKVLSVGPGTRDREGNLIPVTV 60
          MAKRL+P LNRVL+EKI+PP+KT +GILLPEKSS+LNSG+V++VGPG RDR GNLIPV+V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGDKQLYLFRDEDLLGTLHE 98
          KEGD VLLPE+GGT+VKLG+K+  L+RDED++ TLHE
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of Moc01g17750 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 )

HSP 1 Score: 57.8 bits (138), Expect = 5.7e-09
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 3   KRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G V++VGPG+ D EG + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVKLGDKQLYL-FRDEDLLGTL 96
            G TVL  +Y G + K  D   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of Moc01g17750 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 )

HSP 1 Score: 57.8 bits (138), Expect = 5.7e-09
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 3   KRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G V++VGPG+ D EG + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVKLGDKQLYL-FRDEDLLGTL 96
            G TVL  +Y G + K  D   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of Moc01g17750 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 )

HSP 1 Score: 57.8 bits (138), Expect = 5.7e-09
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 3   KRLVPLLNRVLIEKIVPPAKTNTGILLPEKS-SKLNSGKVLSVGPGTRDREGNLIPVTVK 62
           K L PL +RV I+      KT  G+LL E +  K + G V++VGPG+ D EG + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTEVKLGDKQLYL-FRDEDLLGTL 96
            G TVL  +Y G + K  D   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

The following BLAST results are available for this feature:

BLAST of Moc01g17750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154455.1	2.1e-45	100.00	10 kDa chaperonin, mitochondrial-like [Momordica charantia]	[more]
XP_038881343.1	3.7e-42	91.75	10 kDa chaperonin, mitochondrial-like [Benincasa hispida]	[more]
XP_022966634.1	4.8e-42	91.75	10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]	[more]
XP_022931931.1	8.2e-42	90.72	10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kD...	[more]
XP_008455733.1	2.9e-39	85.57	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]

BLAST of Moc01g17750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	3.7e-37	72.16	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	6.3e-37	72.16	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
O59804	1.0e-18	48.45	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q9W6X3	6.6e-18	47.83	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=...	[more]
P38910	8.6e-18	47.92	10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Moc01g17750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJN1	1.0e-45	100.00	10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A6J1HUD0	2.3e-42	91.75	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11146626...	[more]
A0A6J1EUZ7	4.0e-42	90.72	10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A1S3C2U3	1.4e-39	85.57	10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103495836 PE=3 SV=1	[more]
A0A6P5TYD6	1.8e-39	83.51	10 kDa chaperonin, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110772016 P...	[more]

BLAST of Moc01g17750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14980.1	2.6e-38	72.16	chaperonin 10	[more]
AT1G23100.1	3.4e-38	74.23	GroES-like family protein	[more]
AT5G20720.1	5.7e-09	38.95	chaperonin 20	[more]
AT5G20720.2	5.7e-09	38.95	chaperonin 20	[more]
AT5G20720.3	5.7e-09	38.95	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 61..73 score: 52.0 coord: 5..20 score: 31.51 coord: 26..47 score: 34.61 coord: 82..95 score: 24.18
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 e-value: 7.9E-30 score: 115.1
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 5..94 e-value: 6.9E-23 score: 80.5
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..95 e-value: 5.44963E-32 score: 105.667
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..97 e-value: 5.6E-30 score: 105.5
None	No IPR available	PANTHER	PTHR10772:SF37	GROES-LIKE FAMILY PROTEIN	coord: 1..97
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 3..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g17750.1	Moc01g17750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051085	chaperone cofactor-dependent protein refolding
biological_process	GO:0006457	protein folding
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding