Moc01g16040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g16040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein POLYCHOME
Location	chr1: 10366017 .. 10368322 (+)
RNA-Seq Expression	Moc01g16040
Synteny	Moc01g16040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGTCGAGGGACAGATTGGAGAGGCAAGTCGACTATGCCGAGTTCTTTGTAACTCGGAGAGCGGGAGGCATTTTGGTCGATCCTGAGGTGACTCCGGTTGTGCGACCCACTGCGACGACTACAGCTCCTCAAAGACCTTCGAATCTCGGCCCCGGGGGAGGCGGCGTGCCTCTGAGACGCAGTTTTGGGTCTCCTATTTCTGGAGGAATTGGACGGAATCGATTTCTTTACAGATCTCCGGTGATGAACCGCGAAAATGCGGCGGCGGGGAGTTCCCGGCGGAGTAGATCTAGGGGGAGGAACAGCGTGTTACCTAGTTGGTACCCAAGAACCCCTCTCCGCGACATAACGGCAGTTGTGAGGGTAATATTACGTCCCCTGCTCTTTTGATTTTTGTTTCTTTCAATTTTTGTTTTTGGTTCTGTTTGGGTTTATTCTGTTCTGCTTTAAATTTTGTGGAGTACTTGCATAAATCATCTTGTGTAATGTCCATAGTTATCGCATTTCCATGTCCATTTGGTGAATTTGATTCATATGGGTTCTGGTACGCATGTCATATACACCAATAGCTGTGGTGAATGGTGAAGAATGCTGGTGAAATATTTGTTCTCTGATACAGTGTACTTTTTGGATTCATTGGAATTTGAATTTGCTTGATTTTCGGAAGGCCTGTTTTGATTTTCTGGTGTAGTTGTTTTGTGATTCTTGTTTCTGTTCTTCAGTTGGTTGCATTTGATTTGGTTTGGTTTACATTTCAAATGAAAATGCTTATTGGATATGGAACCCTTTTCGTGAATCCTCAGATTGGATCACTTTTCTTTTTCTTTTGGTCAATTAATTAATAAATTCCTTGTGATTATAAGCAATGCACTATTTACTTGTTTCTCTCAAAAGAAGATTCTTTTGGTTTTGTAAAGTCCATGCCTAATGATTTCATATGAAGCACCAACAGTCTGGATGATGTGATCTTGTCCATATTTGTTTATGAAGATTAACTTATTTTCTTCACTTTTTAGGGTGTATTTTGGGGATGATTTTGGCATAATCAAAATCATCAAAAATCGCTTTTACCATTGTCAAAATCACTTCTCTTTGATTATGTTTGGTAAGTTATAAAATTAATTTGAGTAAAGTTTTAAATCCCTCTGAATTGATTTTTAAGCTATCACTAGCACGAACTTAAATCTCTTTTTTCAAAATCACTCCTATCATCACTTCCAAACACTCTTTTCTTCGAATTGATTTTCTGGGCTTTATTTTAACCTGTTTTGACAACTGTATTTTTAGCAGGCTCAGTATGCTTGGGCTTGTTACAAGGTTGTTGTATCTAGTTATTCCAATTAACATTTTGGGCCTATATAGAAGCTTTAATTAATTTGCCTGTAAAATGGAAAAGTGCAATGATATCTCATTACTTGTAAAATATATGTAGAATACTTATTAAGTATCCCACACTTTTGAATTATTGTACTTTTATGCCCATCAATTTGAAGGATGAATTATATTAACTTTCTTTTTGACAAACATATGAATAAATATATATTATTGATTTGGCATTGTACCATCAGAAATAGGTAGTTGCTTTGTTCTGCTTTAGGTTCATTCTTGTCTTTTCTCTGTCACATGTTTTTGTCTGCATTTTTCATCTCAAATCCTTGCAACTTTTTAAGTTGCTTCCCTTGTATTTCTGAGCCTATGTCCTTCGACTAGTCAATAGAAAACTGCGAACAGGGTTAAAGTTTGGGAATTTGTTATTTGAATTCCCATTTCAAATGTTCATCTTATTTTACTTTATCTTCTATGCGGTCATCTGTGTGTTTAGTTACAGAAATCTCCTTCCCTAGTTCTCCATTTGAGGCAAGTTGAATTGGGGTTGGGCTTCTTATAGGCATCGTTCAATAGTTGTTAATTTCTCAAGAATCTTACTCTTCAAACAGGCAATTGAACGGACAAGAGCTCGCTTGAGAGAGAACGAAGGCCAAGGAAGTGACAATACTCCAGCTCCCTCGGACCAAAGAGCTATAGATTCTAGCGCATCTGTGGCAGGTGATCATCAAGAGCCAAGTATCTCTCTGATCACCCCAAAACCAACCGTAGGAGGAGTAAAAAAGATTCTGCGTGGAATTGCGAACCAGAACGCGGGAGAAGCCGAGTTTCTGACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAGGTAGTAATGGAGGAACTGGAGAAATTGAAGAAGACGCCGAGTGCCAAGAGGGCAGAGAGGGAAAAAAGAGTTCGCACTCTGATGTCATTTCGTTGA

mRNA sequence

ATGTCGGAGTCGAGGGACAGATTGGAGAGGCAAGTCGACTATGCCGAGTTCTTTGTAACTCGGAGAGCGGGAGGCATTTTGGTCGATCCTGAGGTGACTCCGGTTGTGCGACCCACTGCGACGACTACAGCTCCTCAAAGACCTTCGAATCTCGGCCCCGGGGGAGGCGGCGTGCCTCTGAGACGCAGTTTTGGGTCTCCTATTTCTGGAGGAATTGGACGGAATCGATTTCTTTACAGATCTCCGGTGATGAACCGCGAAAATGCGGCGGCGGGGAGTTCCCGGCGGAGTAGATCTAGGGGGAGGAACAGCGTGTTACCTAGTTGGTACCCAAGAACCCCTCTCCGCGACATAACGGCAGTTGTGAGGGCAATTGAACGGACAAGAGCTCGCTTGAGAGAGAACGAAGGCCAAGGAAGTGACAATACTCCAGCTCCCTCGGACCAAAGAGCTATAGATTCTAGCGCATCTGTGGCAGGTGATCATCAAGAGCCAAGTATCTCTCTGATCACCCCAAAACCAACCGTAGGAGGAGTAAAAAAGATTCTGCGTGGAATTGCGAACCAGAACGCGGGAGAAGCCGAGTTTCTGACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAGGTAGTAATGGAGGAACTGGAGAAATTGAAGAAGACGCCGAGTGCCAAGAGGGCAGAGAGGGAAAAAAGAGTTCGCACTCTGATGTCATTTCGTTGA

Coding sequence (CDS)

ATGTCGGAGTCGAGGGACAGATTGGAGAGGCAAGTCGACTATGCCGAGTTCTTTGTAACTCGGAGAGCGGGAGGCATTTTGGTCGATCCTGAGGTGACTCCGGTTGTGCGACCCACTGCGACGACTACAGCTCCTCAAAGACCTTCGAATCTCGGCCCCGGGGGAGGCGGCGTGCCTCTGAGACGCAGTTTTGGGTCTCCTATTTCTGGAGGAATTGGACGGAATCGATTTCTTTACAGATCTCCGGTGATGAACCGCGAAAATGCGGCGGCGGGGAGTTCCCGGCGGAGTAGATCTAGGGGGAGGAACAGCGTGTTACCTAGTTGGTACCCAAGAACCCCTCTCCGCGACATAACGGCAGTTGTGAGGGCAATTGAACGGACAAGAGCTCGCTTGAGAGAGAACGAAGGCCAAGGAAGTGACAATACTCCAGCTCCCTCGGACCAAAGAGCTATAGATTCTAGCGCATCTGTGGCAGGTGATCATCAAGAGCCAAGTATCTCTCTGATCACCCCAAAACCAACCGTAGGAGGAGTAAAAAAGATTCTGCGTGGAATTGCGAACCAGAACGCGGGAGAAGCCGAGTTTCTGACTCCCCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAGGTAGTAATGGAGGAACTGGAGAAATTGAAGAAGACGCCGAGTGCCAAGAGGGCAGAGAGGGAAAAAAGAGTTCGCACTCTGATGTCATTTCGTTGA

Protein sequence

MSESRDRLERQVDYAEFFVTRRAGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLMSFR

Homology

[Close]

BLAST of Moc01g16040 vs. NCBI nr
Match: XP_022151615.1 (protein POLYCHOME [Momordica charantia])

HSP 1 Score: 458.8 bits (1179), Expect = 3.0e-125
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60
           MSESRDRLERQVDYAEFFVTRR GGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL
Sbjct: 1   MSESRDRLERQVDYAEFFVTRRXGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60

Query: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120
           RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA
Sbjct: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120

Query: 121 VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK 180
           VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK
Sbjct: 121 VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK 180

Query: 181 KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM 240
           KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM
Sbjct: 181 KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM 240

Query: 241 SFR 244
           SFR
Sbjct: 241 SFR 243

[Close]

BLAST of Moc01g16040 vs. NCBI nr
Match: XP_038881398.1 (protein POLYCHOME [Benincasa hispida])

HSP 1 Score: 376.7 bits (966), Expect = 1.5e-100
Identity = 200/249 (80.32%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVD+AE F  RR+ GIL + E+      TP+ RPT TTTA QRP+N GPG
Sbjct: 1   MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARPTTTTTAQQRPTNPGPG 60

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYRSPV+NREN AAGSSRR+RSRGRNSVLP WYPRTP
Sbjct: 61  GGGANLRRAFGSPISGGIGRNRFLYRSPVLNRENTAAGSSRRNRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDN+PAPSD+RA++ +  VAGDHQEPSISL+TPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYTVLVAGDHQEPSISLVTPKP 180

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V+KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 181 TVGKVRKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of Moc01g16040 vs. NCBI nr
Match: KGN53824.1 (hypothetical protein Csa_015343 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T T TA QRP+N GPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

[Close]

BLAST of Moc01g16040 vs. NCBI nr
Match: XP_004150162.1 (protein POLYCHOME [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T T TA QRP+N GPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of Moc01g16040 vs. NCBI nr
Match: XP_008460799.1 (PREDICTED: protein POLYCHOME [Cucumis melo] >KAA0053198.1 protein POLYCHOME [Cucumis melo var. makuwa] >TYK00145.1 protein POLYCHOME [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.5e-97
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T TT A QRP+N GPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPG 60

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 61  GGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of Moc01g16040 vs. ExPASy Swiss-Prot
Match: O48533 (Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.1e-53
Identity = 136/264 (51.52%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVT-------PVVRPTATTTAPQRPSNLGP 60
           M E+RDR+ERQVDY   F+ RR+ GIL+D   T       PV R  +  T      ++G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGL--GSIGQ 60

Query: 61  G---GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWY 120
           G   G G  +R +FG   +GG  R +  +RSP   REN + G +RR R+R  NSVLPSWY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSP-QGRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSD-NTPAPSDQRAIDSSASVAGDHQEPSISL 180
           PRTPLRDI+AVVRAIER RAR+   EG G D  TP P     +DS   ++G H E   S+
Sbjct: 121 PRTPLRDISAVVRAIERRRARM--GEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSM 180

Query: 181 ITPKPTVG----------GVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELE 240
           +TP P++G           V +IL  I  +N GE + LTP+KKLLNSIDKVEKVVMEE++
Sbjct: 181 VTPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQ 240

Query: 241 KLKKTPSAKRAEREKRVRTLMSFR 244
           K+K TPSAKRAEREKRVRTLMS R
Sbjct: 241 KMKSTPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of Moc01g16040 vs. ExPASy Swiss-Prot
Match: Q9M2R1 (Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.1e-35
Identity = 112/259 (43.24%), Postives = 146/259 (56.37%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60
           M E+RDR ER VDY+  F  RR  GIL+D   + +    +   +P  P     GG G  +
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRL----SLIESPVNPDIGSIGGTGGLV 60

Query: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120
           R +F +   G        +R P   REN    ++RR R  G   +LPSWYPRTPLRDIT 
Sbjct: 61  RGNFTTWRPGNGRGGHTPFRLP-QGRENMPIVTARRGRGGG---LLPSWYPRTPLRDITH 120

Query: 121 VVRAIERTRARLRENEGQGSDN-----TPAPSDQRAIDSSASVAGDHQEPSISLITPKPT 180
           +VRAIER     R   G G D+      P       ++S   ++G+H+    S++TP P+
Sbjct: 121 IVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CSMVTPGPS 180

Query: 181 VG----------GVKKILRGIANQNA-GEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKT 240
           VG           V+K+L  I  + A  EA F+TP+KKLLNSIDKVEK+VM E++KLK T
Sbjct: 181 VGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKST 240

Query: 241 PSAKRAEREKRVRTLMSFR 244
           P AKR EREKRVRTLM+ R
Sbjct: 241 PQAKREEREKRVRTLMTMR 243

[Close]

BLAST of Moc01g16040 vs. ExPASy TrEMBL
Match: A0A6J1DBP3 (protein POLYCHOME OS=Momordica charantia OX=3673 GN=LOC111019533 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60
           MSESRDRLERQVDYAEFFVTRR GGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL
Sbjct: 1   MSESRDRLERQVDYAEFFVTRRXGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60

Query: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120
           RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA
Sbjct: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120

Query: 121 VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK 180
           VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK
Sbjct: 121 VVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKPTVGGVK 180

Query: 181 KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM 240
           KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM
Sbjct: 181 KILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREKRVRTLM 240

Query: 241 SFR 244
           SFR
Sbjct: 241 SFR 243

[Close]

BLAST of Moc01g16040 vs. ExPASy TrEMBL
Match: A0A0A0KY99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152290 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.8e-98
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T T TA QRP+N GPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

[Close]

BLAST of Moc01g16040 vs. ExPASy TrEMBL
Match: A0A5D3BM43 (Protein POLYCHOME OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00330 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.7e-97
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T TT A QRP+N GPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPG 60

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 61  GGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of Moc01g16040 vs. ExPASy TrEMBL
Match: A0A1S3CDA1 (protein POLYCHOME OS=Cucumis melo OX=3656 GN=LOC103499559 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.7e-97
Identity = 196/249 (78.71%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEV------TPVVRPTATTTAPQRPSNLGPG 60
           MSE+RDRLERQVDYAE F  RR+ GIL + E+      TP+ R T TT A QRP+N GPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPG 60

Query: 61  GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTP 120
           GGG  LRR+FGSPISGGIGRNRFLYR+PV++REN +AGSSRRSRSRGRNSVLP WYPRTP
Sbjct: 61  GGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISLITPKP 180
           LRDITAVVRAIERTRARLRENEGQGSD++PAPSD+RA++ S SVA DHQEP ISL+TPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKRAEREK 240
           TVG V KILRGIAN+N   AE LTPQKKLLNSIDKVEKVVMEEL+KLK+TPSAK+AEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 244
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of Moc01g16040 vs. ExPASy TrEMBL
Match: A0A6J1EBD1 (protein POLYCHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111432471 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 201/254 (79.13%), Postives = 221/254 (87.01%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRA-GGILVDPEV------TPVVRPTATTTAPQRPSNLGP 60
           MSESRDRLERQVDYAE F  RR+ GGIL + E+      TP+ R T TTTA QRP+NLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 61  GGGG----VPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSW 120
           GGGG    +P RRSFGSPISGGIGRNRFLYRSPV++REN AAGSSRRSRSR R+SVLP W
Sbjct: 61  GGGGGGGAIP-RRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNTPAPSDQRAIDSSASVAGDHQEPSISL 180
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDN+PAPSD+RA++ SASV+G HQEP +SL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 181 ITPKPTVGGVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKTPSAKR 240
           +TPKPTVG V KILRGIAN+N  E+E LTPQKKLLNSIDKVEKVV EEL+KL+KTPSAKR
Sbjct: 181 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 241 AEREKRVRTLMSFR 244
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 253

[Close]

BLAST of Moc01g16040 vs. TAIR 10
Match: AT2G42260.1 (uv-b-insensitive 4 )

HSP 1 Score: 208.8 bits (530), Expect = 5.0e-54
Identity = 136/264 (51.52%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVT-------PVVRPTATTTAPQRPSNLGP 60
           M E+RDR+ERQVDY   F+ RR+ GIL+D   T       PV R  +  T      ++G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGL--GSIGQ 60

Query: 61  G---GGGVPLRRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWY 120
           G   G G  +R +FG   +GG  R +  +RSP   REN + G +RR R+R  NSVLPSWY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSP-QGRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSD-NTPAPSDQRAIDSSASVAGDHQEPSISL 180
           PRTPLRDI+AVVRAIER RAR+   EG G D  TP P     +DS   ++G H E   S+
Sbjct: 121 PRTPLRDISAVVRAIERRRARM--GEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSM 180

Query: 181 ITPKPTVG----------GVKKILRGIANQNAGEAEFLTPQKKLLNSIDKVEKVVMEELE 240
           +TP P++G           V +IL  I  +N GE + LTP+KKLLNSIDKVEKVVMEE++
Sbjct: 181 VTPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQ 240

Query: 241 KLKKTPSAKRAEREKRVRTLMSFR 244
           K+K TPSAKRAEREKRVRTLMS R
Sbjct: 241 KMKSTPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of Moc01g16040 vs. TAIR 10
Match: AT3G57860.1 (UV-B-insensitive 4-like )

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-36
Identity = 112/259 (43.24%), Postives = 146/259 (56.37%), Query Frame = 0


Query: 1   MSESRDRLERQVDYAEFFVTRRAGGILVDPEVTPVVRPTATTTAPQRPSNLGPGGGGVPL 60
           M E+RDR ER VDY+  F  RR  GIL+D   + +    +   +P  P     GG G  +
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRL----SLIESPVNPDIGSIGGTGGLV 60

Query: 61  RRSFGSPISGGIGRNRFLYRSPVMNRENAAAGSSRRSRSRGRNSVLPSWYPRTPLRDITA 120
           R +F +   G        +R P   REN    ++RR R  G   +LPSWYPRTPLRDIT 
Sbjct: 61  RGNFTTWRPGNGRGGHTPFRLP-QGRENMPIVTARRGRGGG---LLPSWYPRTPLRDITH 120

Query: 121 VVRAIERTRARLRENEGQGSDN-----TPAPSDQRAIDSSASVAGDHQEPSISLITPKPT 180
           +VRAIER     R   G G D+      P       ++S   ++G+H+    S++TP P+
Sbjct: 121 IVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CSMVTPGPS 180

Query: 181 VG----------GVKKILRGIANQNA-GEAEFLTPQKKLLNSIDKVEKVVMEELEKLKKT 240
           VG           V+K+L  I  + A  EA F+TP+KKLLNSIDKVEK+VM E++KLK T
Sbjct: 181 VGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKST 240

Query: 241 PSAKRAEREKRVRTLMSFR 244
           P AKR EREKRVRTLM+ R
Sbjct: 241 PQAKREEREKRVRTLMTMR 243

The following BLAST results are available for this feature:

BLAST of Moc01g16040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151615.1	3.0e-125	99.59	protein POLYCHOME [Momordica charantia]	[more]
XP_038881398.1	1.5e-100	80.32	protein POLYCHOME [Benincasa hispida]	[more]
KGN53824.1	2.0e-97	78.71	hypothetical protein Csa_015343 [Cucumis sativus]	[more]
XP_004150162.1	2.0e-97	78.71	protein POLYCHOME [Cucumis sativus]	[more]
XP_008460799.1	3.5e-97	78.71	PREDICTED: protein POLYCHOME [Cucumis melo] >KAA0053198.1 protein POLYCHOME [Cuc...	[more]

BLAST of Moc01g16040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48533	7.1e-53	51.52	Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1	[more]
Q9M2R1	5.1e-35	43.24	Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1	[more]

BLAST of Moc01g16040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBP3	1.5e-125	99.59	protein POLYCHOME OS=Momordica charantia OX=3673 GN=LOC111019533 PE=4 SV=1	[more]
A0A0A0KY99	9.8e-98	78.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152290 PE=4 SV=1	[more]
A0A5D3BM43	1.7e-97	78.71	Protein POLYCHOME OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G0...	[more]
A0A1S3CDA1	1.7e-97	78.71	protein POLYCHOME OS=Cucumis melo OX=3656 GN=LOC103499559 PE=4 SV=1	[more]
A0A6J1EBD1	2.2e-97	79.13	protein POLYCHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111432471 PE=4 SV=1	[more]

BLAST of Moc01g16040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42260.1	5.0e-54	51.52	uv-b-insensitive 4	[more]
AT3G57860.1	3.6e-36	43.24	UV-B-insensitive 4-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..172
None	No IPR available	PANTHER	PTHR35119:SF1	PROTEIN POLYCHOME	coord: 1..243
IPR034590	POLYCHOME/GIGAS CELL1	PANTHER	PTHR35119	PROTEIN POLYCHOME	coord: 1..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g16040.1	Moc01g16040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904667	negative regulation of ubiquitin protein ligase activity
biological_process	GO:0051783	regulation of nuclear division
cellular_component	GO:0005634	nucleus