Moc01g15990 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g15990
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Location	chr1: 10308986 .. 10310443 (-)
RNA-Seq Expression	Moc01g15990
Synteny	Moc01g15990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGGGGAATCCTCGCCCCGTCCCATCTGGATCCCGATTGGGATCCCAGTTTGTGTTGGGTTTTGGCAAAATATTGGAATTAAAGTTCCCACATTAGAAGAATACAAGGATGGTCTCCATGTGCTAGAAGTTGTACCACATCGAAAAAGTACAATGAGGAGATGTGTTTCAACTACTATAAAAGGAGCTCATGGACTTGGGTTTTAATCATCCCAATTGAAATACTTTAAGCCTGATATACTTGTTTTGTGTAATTGGGGTCGGGGAGAGAAATCTGTGTGATTGTAATAATTTTTTTTTCTCCAGTTTGGAGTTTTTCCACGTTAATTATTCTTGTGTTTATTTATTTTATTGCTTTCTTTAAATTTCTCAGTTATTTTCTGCTTATTCCTGCGGTAGAAGTAGGGGATTTTTCCCAACAAGTGGTATCAGAGCTTTAGGTTTGTAGTTTCTAGAATTTCTGAGTATGCTCTGTGGTTGCAGCATTGTCTGAACTTCCACATCAGAAAAGATTTCTTGAAACGAGCTACGGTTCTGTGAATAGTGTGGATTGTTCACTATTTGCAGATTTGATAGGAGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCGACTTTGGCTTGTTGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGAAAAAGCTAAGCGGTGATGGTGGTCCAATGCAGTCCAGTGGCGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATAAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGAGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAACATCATCTTTGAGCTGGAGGCGATCGAAGTGAAGATAGATGATGAAGATAAAGCACTCATGCTCATCTTATCACTTCCAACTTCTTATGAACACATGGAGCCGATCTTGATGTATGGGAATGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAATAGAGCCGATTCGTCAAAGGGCTTTGGGTGGGATGCTGACAATATTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA

mRNA sequence

ATGGGGTGGGGAATCCTCGCCCCGTCCCATCTGGATCCCGATTGGGATCCCACATTGTCTGAACTTCCACATCAGAAAAGATTTCTTGAAACGAGCTACGGTTCTGTGAATAGTGTGGATTGTTCACTATTTGCAGATTTGATAGGAGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCGACTTTGGCTTGTTGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGAAAAAGCTAAGCGGTGATGGTGGTCCAATGCAGTCCAGTGGCGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATAAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGAGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAACATCATCTTTGAGCTGGAGGCGATCGAAGTGAAGATAGATGATGAAGATAAAGCACTCATGCTCATCTTATCACTTCCAACTTCTTATGAACACATGGAGCCGATCTTGATGTATGGGAATGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAATAGAGCCGATTCGTCAAAGGGCTTTGGGTGGGATGCTGACAATATTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA

Coding sequence (CDS)

ATGGGGTGGGGAATCCTCGCCCCGTCCCATCTGGATCCCGATTGGGATCCCACATTGTCTGAACTTCCACATCAGAAAAGATTTCTTGAAACGAGCTACGGTTCTGTGAATAGTGTGGATTGTTCACTATTTGCAGATTTGATAGGAGAGTGTGAAGCAGATATGTCATTCTTTATGAGTCCAGTGAAGATTGACGTGGAGAAATTTGACGGAAGGATCGACTTTGGCTTGTTGCAAGTGCAAGTCAAGGATGTGCTGATACAATCTGGGTTACACAAGGCGTTGAAGGGAAGACCGAGTGAAGGTGCTTCGAAAAAGCTAAGCGGTGATGGTGGTCCAATGCAGTCCAGTGGCGGTTCCAGCAGAGGTTCTAAGAAGTCTAGCATAAGTGATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGCGCGATACGAACAAGTTTGGCTAAGAATATTCTTGCGAATGAGCATGGAATTTCGACAGCCAAAGAACTTTGGGAGAAGCTCGAAGCGTTGTATCAGGCAAAGGGCATCTCAAATCGGCTGTACCTGAAGGAGCAGTTTCACACGCTGCGAATGGAGGAAGGTATGAAAATTTCAGATCATCTGAGTAATCTCAATAACATCATCTTTGAGCTGGAGGCGATCGAAGTGAAGATAGATGATGAAGATAAAGCACTCATGCTCATCTTATCACTTCCAACTTCTTATGAACACATGGAGCCGATCTTGATGTATGGGAATGATACTTTGAATTTTGCTGAGGTTACTAGTAAACTCTTGTCAGAGGAAAGAAGGCTGAAGAGTGAAGGGCGTACTTCACATGAAGATTTGGCACTGGTAGCTAGCAATTGGAAGAAGAAGAAAGACTCCATACAAAAGAAAGCTTGTTGCTGGGGATGCGGACAGTCTGGACACATGAAGAAAGATTGTCCCAATAGAGCCGATTCGTCAAAGGGCTTTGGGTGGGATGCTGACAATATTTCTCTCATCAGGGGAGACGATGATCAGTTCCTTTGA

Protein sequence

MGWGILAPSHLDPDWDPTLSELPHQKRFLETSYGSVNSVDCSLFADLIGECEADMSFFMSPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWGCGQSGHMKKDCPNRADSSKGFGWDADNISLIRGDDDQFL

Homology

[Close]

BLAST of Moc01g15990 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 480.3 bits (1235), Expect = 1.3e-131
Identity = 247/269 (91.82%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 47  LIGECEADMSFFMSPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKK 106
           + GECEADMSFFMSPVKIDVEKFDG I+FGL QVQVKDVLIQS LHKALKGRPSEGAS+K
Sbjct: 287 ITGECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEK 346

Query: 107 LSGDGGPMQSSGGSSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKEL 166
           LS DGGPM+SSGGSSRGSKKSS+S EDWEEMDLRAASAIRTSLAKNILAN H ISTAKEL
Sbjct: 347 LSDDGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKEL 406

Query: 167 WEKLEALYQAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDK 226
           WEKLEALYQAKGISNRLYLKEQFHTL+MEEGMKISDHLSNLN+IIFELEAIEVKIDDEDK
Sbjct: 407 WEKLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDK 466

Query: 227 ALMLILSLPTSYEHMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNW 286
           AL LILSLP SYEHM+PILMYG DTLNFAEVTSKLLSEERRLKSEGRTSHED ALV SNW
Sbjct: 467 ALRLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNW 526

Query: 287 KKKKDSIQKKACCWGCGQSGHMKKDCPNR 316
           KKKKDS+QKKACCWGCGQSGHMKKDCPNR
Sbjct: 527 KKKKDSVQKKACCWGCGQSGHMKKDCPNR 555

[Close]

BLAST of Moc01g15990 vs. NCBI nr
Match: KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-84
Identity = 174/277 (62.82%), Postives = 207/277 (74.73%), Query Frame = 0


Query: 60  SPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGG 119
           SP++ DVEK+DGRI+FGL QVQVKDVLIQSGLHKAL+G+P+  +SK  SG          
Sbjct: 5   SPMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKDSSG---------- 64

Query: 120 SSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGI 179
                  S   DE+WE++DLRAASAIR  LAKN+LAN HGISTAK+LWEKLE LYQ KGI
Sbjct: 65  ------TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 180 SNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYE 239
            NRLYLKEQFHTLRM+   KISDHLS LNNI+ ELEAI VK++DEDKAL LILSL +SYE
Sbjct: 125 PNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 240 HMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACC 299
           HM+PILMYG +TL +A+VT KLLSEE+RL S G TS E   L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 244

Query: 300 WGCGQSGHMKKDCPNRADSSKGFGWDADNISLIRGDD 337
           W CGQSGH+K++CP  ADS+      A+N++++ GDD
Sbjct: 245 WKCGQSGHVKRNCPGGADSASS-SKTANNVAVVDGDD 262

[Close]

BLAST of Moc01g15990 vs. NCBI nr
Match: KAF5758504.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 321.2 bits (822), Expect = 1.0e-83
Identity = 174/277 (62.82%), Postives = 207/277 (74.73%), Query Frame = 0


Query: 60  SPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGG 119
           SP++  VEK+DGRI+FGL QVQVKDVLIQSGLHKAL+G+P+  +SK  SG          
Sbjct: 5   SPMRFVVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPTPVSSKDSSG---------- 64

Query: 120 SSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGI 179
                  S   DE+WE++DLRAASAIR  LAKN+LAN HGISTAK+LWEKLE LYQ KGI
Sbjct: 65  ------TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGI 124

Query: 180 SNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYE 239
           SNRLYLKEQFHTLRM+   KISDHLS LNNI+ ELEAI VK++DEDKAL LILSL +SYE
Sbjct: 125 SNRLYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYE 184

Query: 240 HMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACC 299
           HM+PILMYG +TL +A+VT KLLSEE+RL S G TS E   L+  N KKK    QK   C
Sbjct: 185 HMKPILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGNGKKKHP--QKIPVC 244

Query: 300 WGCGQSGHMKKDCPNRADSSKGFGWDADNISLIRGDD 337
           W CGQSGH+K++CP  ADS+      A+N++++ GDD
Sbjct: 245 WKCGQSGHVKRNCPGGADSASN-SKTANNVAVVDGDD 262

[Close]

BLAST of Moc01g15990 vs. NCBI nr
Match: KAF5463231.1 (hypothetical protein F2P56_019161 [Juglans regia])

HSP 1 Score: 306.6 bits (784), Expect = 2.7e-79
Identity = 170/283 (60.07%), Postives = 204/283 (72.08%), Query Frame = 0


Query: 62  VKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSS 121
           ++ +VEKFDGRI+FGL QVQVKDVLIQSGLHKALKGRP+   S   S           + 
Sbjct: 10  IRYEVEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPTPEVSSDTS----------VTD 69

Query: 122 RGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISN 181
           +   +S +SDEDWE++DLRAASAIR  LAKN+LAN HGISTAK+LWEKLE LYQ KG+SN
Sbjct: 70  QTKSRSVMSDEDWEDLDLRAASAIRLCLAKNVLANIHGISTAKKLWEKLEELYQTKGVSN 129

Query: 182 RLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHM 241
           R+YLKEQFHTL M EG  ISDHLS LN I+ ELE+I VKIDDED+AL LI SLP+SYEHM
Sbjct: 130 RVYLKEQFHTLHMSEGTTISDHLSVLNGIVSELESIGVKIDDEDQALRLIWSLPSSYEHM 189

Query: 242 EPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWG 301
           +PIL++G + + F+EVTSKL SEERRL         +LA+V +   KKK+S++ K  CWG
Sbjct: 190 KPILIHGKEKIIFSEVTSKLFSEERRLGGGRNGPPVNLAMVVAGNGKKKNSMKMKVVCWG 249

Query: 302 CGQSGHMKKDCP----NRADSSKGFGWDADN----ISLIRGDD 337
           CGQSGH+KK+CP      A  SK    D DN    +SL   DD
Sbjct: 250 CGQSGHVKKNCPRTGAGSASGSKSVNGDTDNETNVVSLSMEDD 282

[Close]

BLAST of Moc01g15990 vs. NCBI nr
Match: QHN81458.1 (Retrovirus-related Pol polyprotein [Arachis hypogaea])

HSP 1 Score: 305.1 bits (780), Expect = 7.8e-79
Identity = 167/283 (59.01%), Postives = 202/283 (71.38%), Query Frame = 0


Query: 55  MSFFMSPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPM 114
           MS + S VK+++EKFDGRI+FGL Q+QVKDVLIQSGLHKALK R                
Sbjct: 1   MSGYSSAVKLEIEKFDGRINFGLWQIQVKDVLIQSGLHKALKER---------------- 60

Query: 115 QSSGGSSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALY 174
                       S + DE+WEE+DLRAASAIR  LAKN+LAN  GI TAKELW+KLE LY
Sbjct: 61  -----------ISGMKDEEWEELDLRAASAIRLCLAKNVLANVQGIKTAKELWDKLEGLY 120

Query: 175 QAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSL 234
           Q+KGISNRL LKEQFH LRM+  +KISDHLS +N I+ ELEAI VKIDDEDKAL LILSL
Sbjct: 121 QSKGISNRLLLKEQFHNLRMDHNVKISDHLSAINGIVSELEAIGVKIDDEDKALRLILSL 180

Query: 235 PTSYEHMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQ 294
           P+SYE+++P+LMYG +TLNF EV SKL++EERR+K+EG TS  DLALVA +    K +  
Sbjct: 181 PSSYEYIKPVLMYGKETLNFEEVASKLIAEERRMKNEGSTS-SDLALVARSDNYGKGNRG 240

Query: 295 KKACCWGCGQSGHMKKDCPNRADSSKGFGWDADNISLIRGDDD 338
           +   CW CG+SGH+K++CP  A S K    D  NI+L   +DD
Sbjct: 241 RSVTCWKCGKSGHVKRNCPGNAVSEKDSQSDTCNIALSMREDD 255

[Close]

BLAST of Moc01g15990 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-37
Identity = 95/271 (35.06%), Postives = 144/271 (53.14%), Query Frame = 0


Query: 59  MSPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSG 118
           MS VK +V KF+G   F   Q +++D+LIQ GLHK L                       
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVL----------------------- 60

Query: 119 GSSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKG 178
                 K  ++  EDW ++D RAASAIR  L+ +++ N     TA+ +W +LE+LY +K 
Sbjct: 61  -DVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKT 120

Query: 179 ISNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSY 238
           ++N+LYLK+Q + L M EG     HL+  N +I +L  + VKI++EDKA++L+ SLP+SY
Sbjct: 121 LTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSY 180

Query: 239 EHMEPILMYGNDTLNFAEVTSKLLSEERRLK----------SEGR-----TSHEDLALVA 298
           +++   +++G  T+   +VTS LL  E+  K          +EGR      S  +     
Sbjct: 181 DNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSG 240

Query: 299 SNWKKKKDSIQKKACCWGCGQSGHMKKDCPN 315
           +  K K  S  +   C+ C Q GH K+DCPN
Sbjct: 241 ARGKSKNRSKSRVRNCYNCNQPGHFKRDCPN 247

[Close]

BLAST of Moc01g15990 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 2.0e-13
Identity = 54/201 (26.87%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 131 DEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNRLYLKEQFH 190
           D+ W++ +  A S I   L+ + L       TA+++ E L+A+Y+ K ++++L L+++  
Sbjct: 45  DDSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL 104

Query: 191 TLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEH-MEPILMYGN 250
           +L++   M +  H    + +I EL A   KI++ DK   L+++LP+ Y+  +  I     
Sbjct: 105 SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSE 164

Query: 251 DTLNFAEVTSKLLSEERRLKSEGRTSHEDL--ALVASNWKKKKDSIQK------------ 310
           + L  A V ++LL +E ++K++   + + +  A+V +N    K+++ K            
Sbjct: 165 ENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKG 224

Query: 311 ----KACCWGCGQSGHMKKDC 313
               K  C  CG+ GH+KKDC
Sbjct: 225 NSKYKVKCHHCGREGHIKKDC 245

[Close]

BLAST of Moc01g15990 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 6.5e-132
Identity = 247/269 (91.82%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 47  LIGECEADMSFFMSPVKIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKK 106
           + GECEADMSFFMSPVKIDVEKFDG I+FGL QVQVKDVLIQS LHKALKGRPSEGAS+K
Sbjct: 287 ITGECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKDVLIQSELHKALKGRPSEGASEK 346

Query: 107 LSGDGGPMQSSGGSSRGSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKEL 166
           LS DGGPM+SSGGSSRGSKKSS+S EDWEEMDLRAASAIRTSLAKNILAN H ISTAKEL
Sbjct: 347 LSDDGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASAIRTSLAKNILANVHRISTAKEL 406

Query: 167 WEKLEALYQAKGISNRLYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDK 226
           WEKLEALYQAKGISNRLYLKEQFHTL+MEEGMKISDHLSNLN+IIFELEAIEVKIDDEDK
Sbjct: 407 WEKLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHLSNLNSIIFELEAIEVKIDDEDK 466

Query: 227 ALMLILSLPTSYEHMEPILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNW 286
           AL LILSLP SYEHM+PILMYG DTLNFAEVTSKLLSEERRLKSEGRTSHED ALV SNW
Sbjct: 467 ALRLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSEERRLKSEGRTSHEDSALVVSNW 526

Query: 287 KKKKDSIQKKACCWGCGQSGHMKKDCPNR 316
           KKKKDS+QKKACCWGCGQSGHMKKDCPNR
Sbjct: 527 KKKKDSVQKKACCWGCGQSGHMKKDCPNR 555

[Close]

BLAST of Moc01g15990 vs. ExPASy TrEMBL
Match: A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 163/279 (58.42%), Postives = 203/279 (72.76%), Query Frame = 0


Query: 63  KIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSSR 122
           + D+EKFDGRI+FGL QVQVKD+LIQSGL+KALKG+P+         +G        SS 
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPAS------LSEGKEPDKPSDSSG 63

Query: 123 GSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNR 182
              KS +S+E+WEE+D+RAAS IR  LAKN+LAN    S+ KELWEKLE +YQAK +SNR
Sbjct: 64  DKGKSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 183 LYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHME 242
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKAL LI SLP+SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 243 PILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWGC 302
            +LMYG + +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 243

Query: 303 GQSGHMKKDCPN-RADSSKGFGWDADNISLIRGDDDQFL 341
           GQ GH+KKDC N  A+S+ G   DA N+ +   +DD+F+
Sbjct: 244 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 276

[Close]

BLAST of Moc01g15990 vs. ExPASy TrEMBL
Match: A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.1e-77
Identity = 162/279 (58.06%), Postives = 201/279 (72.04%), Query Frame = 0


Query: 63  KIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSSR 122
           + D+EKFDGRI+FGL QVQVKD+LIQSGL+KALKG+P+         +G        SS 
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPAS------LSEGKEPDKPSDSSG 63

Query: 123 GSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNR 182
              KS +S+E+WEE+D+RAAS IR  LAKN+LAN    S+ KELWEKLE +YQAK +SNR
Sbjct: 64  DKGKSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 183 LYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHME 242
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V IDDEDKAL LI SLP+SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIWSLPSSYEHMQ 183

Query: 243 PILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWGC 302
            +LMYG + +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 243

Query: 303 GQSGHMKKDCPN-RADSSKGFGWDADNISLIRGDDDQFL 341
           GQ GH+KKDC N  A+ + G   DA N+ +   +DD+F+
Sbjct: 244 GQPGHLKKDCKNGGANLANGSKSDATNVVVFENEDDEFV 276

[Close]

BLAST of Moc01g15990 vs. ExPASy TrEMBL
Match: A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.1e-77
Identity = 162/279 (58.06%), Postives = 202/279 (72.40%), Query Frame = 0


Query: 63  KIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSSR 122
           + D+EKFDGRI+FGL QVQVKD+LIQSGL+KALKG+P+         +G        SS 
Sbjct: 90  RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPAS------LSEGKEPDKPSDSSG 149

Query: 123 GSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNR 182
              KS +S+E+WEE+D+RAAS IR  LAKN+LAN    S+ KELWEKLE +YQAK +SNR
Sbjct: 150 DKGKSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 209

Query: 183 LYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHME 242
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKAL LI SL +SYEHM+
Sbjct: 210 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLSSSYEHMQ 269

Query: 243 PILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWGC 302
            +LMYG + +NF+EVTSKL+SEERRLK+    S E  AL     +KK    +KK  CWGC
Sbjct: 270 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGC 329

Query: 303 GQSGHMKKDCPN-RADSSKGFGWDADNISLIRGDDDQFL 341
           GQ GH+KKDC N  A+S+ G   DA N+ +   +DD+F+
Sbjct: 330 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEFV 362

[Close]

BLAST of Moc01g15990 vs. ExPASy TrEMBL
Match: A0A6A3DA47 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000132pilonHSYRG00093 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 162/278 (58.27%), Postives = 202/278 (72.66%), Query Frame = 0


Query: 63  KIDVEKFDGRIDFGLLQVQVKDVLIQSGLHKALKGRPSEGASKKLSGDGGPMQSSGGSSR 122
           + D+EKFDGRI+FGL QVQVKD+LIQSGL+KALKG+P+         +G        SS 
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPAS------LFEGKEPDKPSDSSG 63

Query: 123 GSKKSSISDEDWEEMDLRAASAIRTSLAKNILANEHGISTAKELWEKLEALYQAKGISNR 182
              KS +S+E+WEE+D+RAAS IR  LAKN+LAN    S+ KELWEKLE +YQAK +SNR
Sbjct: 64  DKGKSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNR 123

Query: 183 LYLKEQFHTLRMEEGMKISDHLSNLNNIIFELEAIEVKIDDEDKALMLILSLPTSYEHME 242
           LYLKE+FH L+MEEG KISDHLS LN I+ ELE+I V+IDDEDKAL LI SLP+SYEHM+
Sbjct: 124 LYLKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQ 183

Query: 243 PILMYGNDTLNFAEVTSKLLSEERRLKSEGRTSHEDLALVASNWKKKKDSIQKKACCWGC 302
            +LMYG + +NF+EVTSKL+SEERRLK+    S E  AL     +KK    ++K  CWGC
Sbjct: 184 TVLMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVFGNRKKYKGSKRKIICWGC 243

Query: 303 GQSGHMKKDCPN-RADSSKGFGWDADNISLIRGDDDQF 340
           GQ GH+KKDC N  A+S+ G   DA N+ +   +DD+F
Sbjct: 244 GQPGHLKKDCKNGGANSANGSKSDATNVVVFENEDDEF 275

The following BLAST results are available for this feature:

BLAST of Moc01g15990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139673.1	1.3e-131	91.82	uncharacterized protein LOC111010521 [Momordica charantia]	[more]
KAF5765959.1	3.6e-84	62.82	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAF5758504.1	1.0e-83	62.82	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAF5463231.1	2.7e-79	60.07	hypothetical protein F2P56_019161 [Juglans regia]	[more]
QHN81458.1	7.8e-79	59.01	Retrovirus-related Pol polyprotein [Arachis hypogaea]	[more]

BLAST of Moc01g15990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.6e-37	35.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.0e-13	26.87	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Moc01g15990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG82	6.5e-132	91.82	uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6A3BK59	2.4e-78	58.42	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3CWI3	2.1e-77	58.06	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A2YS90	2.1e-77	58.06	Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A3DA47	2.7e-77	58.27	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]

BLAST of Moc01g15990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 298..314 e-value: 0.0033 score: 26.6
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 299..314 score: 10.855963
None	No IPR available	GENE3D	4.10.60.10		coord: 272..323 e-value: 1.3E-5 score: 26.8
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 134..270 e-value: 6.3E-35 score: 119.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..125
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 59..302
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 59..302
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 290..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g15990.1	Moc01g15990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0010467	gene expression
biological_process	GO:0009059	macromolecule biosynthetic process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding