Moc01g15910 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g15910
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NADH:ubiquinone oxidoreductase, ESSS subunit
Location	chr1: 10270557 .. 10270919 (+)
RNA-Seq Expression	Moc01g15910
Synteny	Moc01g15910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCGCCAGCGCCATTTACACGCGCCTCCAACATGCTCCGGCACCGCCTTCTCCCCACTCTGCGGACCCGCGGTGGCGCCGCCGCCGGCCAGAGCCGATGGACTAGCCCCGGCCACGAGGAGCGCCCCAAGGGTTATCTTTTCAATCGGACGCCGCCTCCACCAGGCCAGTCCCGTAAATGGGAGGATTGGGAGCTCCCTTGTTATATTACCAGTTTTCTTACCATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAACGCCTCGAGATGGAGAATATGGGTATATCTGCATCTGGGTCATCTGAATCTGATTGA

mRNA sequence

ATGCCGTCGCCAGCGCCATTTACACGCGCCTCCAACATGCTCCGGCACCGCCTTCTCCCCACTCTGCGGACCCGCGGTGGCGCCGCCGCCGGCCAGAGCCGATGGACTAGCCCCGGCCACGAGGAGCGCCCCAAGGGTTATCTTTTCAATCGGACGCCGCCTCCACCAGGCCAGTCCCGTAAATGGGAGGATTGGGAGCTCCCTTGTTATATTACCAGTTTTCTTACCATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAACGCCTCGAGATGGAGAATATGGGTATATCTGCATCTGGGTCATCTGAATCTGATTGA

Coding sequence (CDS)

ATGCCGTCGCCAGCGCCATTTACACGCGCCTCCAACATGCTCCGGCACCGCCTTCTCCCCACTCTGCGGACCCGCGGTGGCGCCGCCGCCGGCCAGAGCCGATGGACTAGCCCCGGCCACGAGGAGCGCCCCAAGGGTTATCTTTTCAATCGGACGCCGCCTCCACCAGGCCAGTCCCGTAAATGGGAGGATTGGGAGCTCCCTTGTTATATTACCAGTTTTCTTACCATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAACGCCTCGAGATGGAGAATATGGGTATATCTGCATCTGGGTCATCTGAATCTGATTGA

Protein sequence

MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSRKWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD

Homology

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BLAST of Moc01g15910 vs. NCBI nr
Match: XP_022151653.1 (uncharacterized protein LOC111019565 [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 3.6e-63
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120

[Close]

BLAST of Moc01g15910 vs. NCBI nr
Match: XP_038881129.1 (uncharacterized protein LOC120072731 [Benincasa hispida])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PFT ASNMLRHRLLP+LRTRGGAAAGQSRWTSPGHE+RPKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFTNASNMLRHRLLPSLRTRGGAAAGQSRWTSPGHEDRPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME +G+S SGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGVSGSGSSESD 120

[Close]

BLAST of Moc01g15910 vs. NCBI nr
Match: XP_023517134.1 (uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEERPKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+ +SASGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLAMSASGSSESD 120

[Close]

BLAST of Moc01g15910 vs. NCBI nr
Match: XP_022966491.1 (uncharacterized protein LOC111466129 [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+ IS SGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLAISGSGSSESD 120

[Close]

BLAST of Moc01g15910 vs. NCBI nr
Match: XP_022925065.1 (uncharacterized protein LOC111432424 [Cucurbita moschata] >KAG6595653.1 hypothetical protein SDJN03_12206, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027613.1 hypothetical protein SDJN02_11627, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+ +S SGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLAMSGSGSSESD 120

[Close]

BLAST of Moc01g15910 vs. ExPASy TrEMBL
Match: A0A6J1DCT8 (uncharacterized protein LOC111019565 OS=Momordica charantia OX=3673 GN=LOC111019565 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.7e-63
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120

[Close]

BLAST of Moc01g15910 vs. ExPASy TrEMBL
Match: A0A6J1HPH2 (uncharacterized protein LOC111466129 OS=Cucurbita maxima OX=3661 GN=LOC111466129 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.9e-59
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+ IS SGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLAISGSGSSESD 120

[Close]

BLAST of Moc01g15910 vs. ExPASy TrEMBL
Match: A0A6J1EGU8 (uncharacterized protein LOC111432424 OS=Cucurbita moschata OX=3662 GN=LOC111432424 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSR
Sbjct: 1   MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSESD 120
           KWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEN+ +S SGSSESD
Sbjct: 61  KWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLAMSGSGSSESD 120

[Close]

BLAST of Moc01g15910 vs. ExPASy TrEMBL
Match: A0A067KZT1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06813 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPSP PFT AS MLR RL  +LRTRGG AAG SRWTSPGHEERPKGYLFNRTPPP GQSR
Sbjct: 1   MPSPQPFTTASTMLRQRLASSLRTRGGGAAGTSRWTSPGHEERPKGYLFNRTPPPAGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSE 119
           KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEME +G+S SG SE
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGLSGSGESE 118

[Close]

BLAST of Moc01g15910 vs. ExPASy TrEMBL
Match: I3NMS3 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.7e-53
Identity = 103/118 (87.29%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPS  PFT AS+MLR RL  +LRTRGGAAAG SRWTSPGHEERPKGYLFNRTPPPPGQSR
Sbjct: 1   MPSQQPFTTASSMLRQRLASSLRTRGGAAAGPSRWTSPGHEERPKGYLFNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGSSE 119
           KWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKALERLEME +G S SG SE
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLSIETWAHQKALERLEMEKLGTSGSGESE 118

[Close]

BLAST of Moc01g15910 vs. TAIR 10
Match: AT2G42310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-42
Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           MPS    T A+  LR+R+       G  +AG SRW +PGHEERPKGY  NRTPP PGQSR
Sbjct: 1   MPSTQSLTVAAKTLRNRI---FSRSGSTSAGPSRWATPGHEERPKGYFMNRTPPAPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGS 117
           KWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKALERLEME +  +   S
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLSIETWAHQKALERLEMEKLATAGDSS 113

[Close]

BLAST of Moc01g15910 vs. TAIR 10
Match: AT3G57785.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 167.2 bits (422), Expect = 8.3e-42
Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MPSPAPFTRASNMLRHRLLPTLRTRGGAAAGQSRWTSPGHEERPKGYLFNRTPPPPGQSR 60
           M S  P   A+  LR+R+    R+ G  + G SRW +PGHEERPKGY  NRTPPPPGQSR
Sbjct: 1   MASTKPLIVAAKTLRNRI--HFRS-GSTSTGPSRWATPGHEERPKGYFMNRTPPPPGQSR 60

Query: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENMGISASGS 117
           KWEDWELPCYITSFLTIVILGVGLNAKPDL+IETWAHQKALERLEME +  +   S
Sbjct: 61  KWEDWELPCYITSFLTIVILGVGLNAKPDLSIETWAHQKALERLEMEKLASAGDSS 113

The following BLAST results are available for this feature:

BLAST of Moc01g15910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151653.1	3.6e-63	100.00	uncharacterized protein LOC111019565 [Momordica charantia]	[more]
XP_038881129.1	1.4e-59	92.50	uncharacterized protein LOC120072731 [Benincasa hispida]	[more]
XP_023517134.1	5.4e-59	92.50	uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]	[more]
XP_022966491.1	2.0e-58	91.67	uncharacterized protein LOC111466129 [Cucurbita maxima]	[more]
XP_022925065.1	3.5e-58	90.83	uncharacterized protein LOC111432424 [Cucurbita moschata] >KAG6595653.1 hypothet...	[more]

BLAST of Moc01g15910 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g15910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCT8	1.7e-63	100.00	uncharacterized protein LOC111019565 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1HPH2	9.9e-59	91.67	uncharacterized protein LOC111466129 OS=Cucurbita maxima OX=3661 GN=LOC111466129...	[more]
A0A6J1EGU8	1.7e-58	90.83	uncharacterized protein LOC111432424 OS=Cucurbita moschata OX=3662 GN=LOC1114324...	[more]
A0A067KZT1	2.8e-53	87.29	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06813 PE=4 SV=1	[more]
I3NMS3	4.7e-53	87.29	Uncharacterized protein OS=Hevea brasiliensis OX=3981 PE=2 SV=1	[more]

BLAST of Moc01g15910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42310.1	1.7e-42	69.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G57785.1	8.3e-42	69.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..60
None	No IPR available	PANTHER	PTHR40637	ESSS SUBUNIT OF NADH:UBIQUINONE OXIDOREDUCTASE (COMPLEX I) PROTEIN	coord: 10..110
None	No IPR available	PANTHER	PTHR40637:SF3	BNAA03G19790D PROTEIN	coord: 10..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g15910.1	Moc01g15910.1	mRNA