Moc01g15880 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g15880
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr1: 10222875 .. 10223321 (+)
RNA-Seq ExpressionMoc01g15880
SyntenyMoc01g15880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTAACAACAACTGGACAATGGAAAAGACATTGGGAGTAAGTGAGATGAATGGAACATTGGTGTTGAAACAAGACGAGGTCAAAGTAAAAGAGAATTTACTCAATAAGTTTTCGAGAAACAAACTTAGAAAGATGAGGGAGGACGAAGAGAACGGAGTGAACATAACTTTATTCGATGCGAAGAGAAAGGAATCCGTAGAAACAACTATAAAGAAGTCGGCAACTGGGGACGGATTCCATATCAAATGGGAAATTGAAGGCAAAGGATATGTGGTCGGAGATGAGATTTTGATGCGTTGGAGTCGAAAGAAAGAGCAGCTCATTTACATGGTCCTTCAAATTGGTGCAAGTAGAATACATCCACACAACTTTCTTGCTGCAAGCAATCCTTCACAAATTGTCGATGCTTCTCTAACTCGTTCTTCATTCAAATATTTATAA

mRNA sequence

ATGGCCGCTAACAACAACTGGACAATGGAAAAGACATTGGGAGTAAGTGAGATGAATGGAACATTGGTGTTGAAACAAGACGAGGTCAAAGTAAAAGAGAATTTACTCAATAAGTTTTCGAGAAACAAACTTAGAAAGATGAGGGAGGACGAAGAGAACGGAGTGAACATAACTTTATTCGATGCGAAGAGAAAGGAATCCGTAGAAACAACTATAAAGAAGTCGGCAACTGGGGACGGATTCCATATCAAATGGGAAATTGAAGGCAAAGGATATGTGGTCGGAGATGAGATTTTGATGCGTTGGAGTCGAAAGAAAGAGCAGCTCATTTACATGGTCCTTCAAATTGGTGCAAGTAGAATACATCCACACAACTTTCTTGCTGCAAGCAATCCTTCACAAATTGTCGATGCTTCTCTAACTCGTTCTTCATTCAAATATTTATAA

Coding sequence (CDS)

ATGGCCGCTAACAACAACTGGACAATGGAAAAGACATTGGGAGTAAGTGAGATGAATGGAACATTGGTGTTGAAACAAGACGAGGTCAAAGTAAAAGAGAATTTACTCAATAAGTTTTCGAGAAACAAACTTAGAAAGATGAGGGAGGACGAAGAGAACGGAGTGAACATAACTTTATTCGATGCGAAGAGAAAGGAATCCGTAGAAACAACTATAAAGAAGTCGGCAACTGGGGACGGATTCCATATCAAATGGGAAATTGAAGGCAAAGGATATGTGGTCGGAGATGAGATTTTGATGCGTTGGAGTCGAAAGAAAGAGCAGCTCATTTACATGGTCCTTCAAATTGGTGCAAGTAGAATACATCCACACAACTTTCTTGCTGCAAGCAATCCTTCACAAATTGTCGATGCTTCTCTAACTCGTTCTTCATTCAAATATTTATAA

Protein sequence

MAANNNWTMEKTLGVSEMNGTLVLKQDEVKVKENLLNKFSRNKLRKMREDEENGVNITLFDAKRKESVETTIKKSATGDGFHIKWEIEGKGYVVGDEILMRWSRKKEQLIYMVLQIGASRIHPHNFLAASNPSQIVDASLTRSSFKYL
Homology
[Close]
BLAST of Moc01g15880 vs. NCBI nr
Match: KAG6575832.1 (hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 0 

Query: 7   WTMEKTLGVSEMNGTLVLKQDEV--KVKENLLNKFSRNKLRKMREDEENGVNITLFDAKR 66
           WTM K L  ++MNG L L++D+V   +  NL   +SR+K+R +++   N   ITLFD   
Sbjct: 5   WTMIKKLQEADMNGLLQLREDDVDTDINTNLFRWWSRSKVRDLKKQIGNEAKITLFDENT 64

Query: 67  KESVETTIKKSATGDGFHIKWEIEGKGYVVGDEILMRWSRKKEQLIYMVLQI 117
            E + TTI+   T   +HI+W+++ K Y  G ++LM W  K  +L Y VLQI
Sbjct: 65  NEVMHTTIRWLGT-PRYHIEWDVKNKPYASGQDMLMGWDLKYNRLAYKVLQI 115

[Close]
BLAST of Moc01g15880 vs. NCBI nr
Match: KAG6575830.1 (hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-09
Identity = 37/112 (33.04%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 6   NWTMEKTLGVSEMNGTLVLKQD--EVKVKENLLNKFSRNKLRKMREDEENGVNITLFDAK 65
           +WTM K L  ++MNG L L++D  +  ++ NL N + R+K+R ++    + V I L+D  
Sbjct: 4   DWTMIKKLEDADMNGLLQLREDDEDADIRANLFNWWPRSKVRDLKRVVGSEVRIILYDVN 63

Query: 66  RKESVETTIKKSATGDGFHIKWEIEGKGYVVGDEILMRWSRKKEQLIYMVLQ 116
             ++++TT++       +HI+W+I+ K Y  GD++LM W  +  +L Y ++Q
Sbjct: 64  MDQAIQTTMRWLGMA-RYHIEWDIQNKPYSSGDDMLMFWDLRYNRLAYKIIQ 114

The following BLAST results are available for this feature:
BLAST of Moc01g15880 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575832.11.4e-1140.18hypothetical protein SDJN03_26471, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575830.16.3e-0933.04hypothetical protein SDJN03_26469, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Moc01g15880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g15880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g15880 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g15880.1Moc01g15880.1mRNA