Moc01g15690 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g15690
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr1: 10084514 .. 10088400 (-)
RNA-Seq ExpressionMoc01g15690
SyntenyMoc01g15690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAAGATGCATTAGCCTTGCCACCAGAACCAATCACTCGTTCAAGGGCCAAGCAGTTACAGCTAGCATTTGCTTCTCACATCCAAAGAGTAGTGAGCCCCACTAATGGACATCAAGAAGATAAAGGTTGGAAAAAACTTTATTCATGGTGCCAAATGAATATACGAGATGAAGATGAAGCCAAATGAAGACACGAGAAGAAGATGACGGAACTTTGTATCAACAAAGTTATTATTTATTTATTTATTATTATTATTTTTAAATGGTTATCTATCTTATTTCTAGGCCTTTTATGTTTTTAGCACAATGATGTGGGCATTGAATTTATCAATTTTTAGGTGTTTTTTTAAATTAACTATGCCACTTTTAATTGGGGGTAGTATAGTCTTTTAGCTTCCTTTGAGATTAGGGATTTAATCTTGTGAACAGAACGATCAATTTTTTACAGAATGAATTTGGAGTGTTTTATCGTGATGACTAAAGGTTCATCAACTTTGCAATTCCTTATCTAGGTTGCAAACCCGGAACATTCAAGCTAGGTTTGATCAACCTCTTGTGGAGTGTTCAACCTTGTGAGGGAACCAGTTCTCCTTACCTCTTGGTCTTCGATCATCAAGGTAATCCTCGTCTAATATTCCCTTGGGATTGTGCTATTTGATTTGGGGTTTCTGAAATTGACAGTTAGGGGTCCTCCTTAGGTGGAAGGGTTTTTATCTACAATTTTCTAGGGTTTCATATCACATGGACGCCTTGACTCTTGTGTTATCAAACTTTGAAGGAAGAATCGTTGGAACTTTTTGCTCTAAAATCTTTGACTATAGAGTGGGATTTCAATTGTTTTCTCAAATCCGAAGTTCAAATCTTCAAGTTTGGTTCACTTTTCTCTAGTTTACTCTTTTTTCATCGCTTCTAGGGCTAGATTTTTTATTTTTCTAACAAATAGAGGAATATTTTCCAACGTATATCATGATTTTTAGTTGAAAGGCCACTGGAGTTAGGGTTTCGGGAGTTTCTGAATTTGAGAGTGCTACTAATTTTTGAAAAAAAAAGGAGTGATTTTGATTTACGAAGGGGATGGAGTTTGTGGTTTCTTGATGGAACATCGGGCGAGTTTTGTTCGATAAATAAAGTAGTGGACAAAATAAAGGTCAAAACTTGAGCAAACTTAAAAAAACTCAGGTGAGTTCGAAGAAAACTCGCGTCGAGTGGTATGAAATGCGCCTAAAACATGGGTTTAGCAGCGAGTTTTCATAACTTGGGATAGATCTCTAGCGAGGCTACAATTTATAATATATTTTATTTGTTATATTTGTTACAAACATTTTCTTTGGTTCGTTGGCTTCGAGCACATCCTACCGTCCCATTTTCTCGTGTTTGATTCCAATTGTTAGTAATTTTTATGCTATTTTTCCTATATAATTGGTCAATTTTTAAAAAAGGAAAACAAATCCTGATTTCATCCAATAGGATTCAAACTTAGGCAGCAGGAAGATTCGACCATATTCCAACCAGTGTTCTTAATGTCGATGTCGATGGAAATGTCGAGGTCTCGATGTTACGGACATGTCGATGTCGACGAATATTTCGGGAAAAATAATGGAAATTGTAGAAATTTTTCGAATTAACAAATAAACTTGAATTGTAGCTTAATTAGCCTATAATTGGTCACCTTTAACCATTAAATATAAGAATATGACCATTTTACTTATGAAAATGTCGACGTCGATGGAAATATCTAAAAAAAGATTTTTTTCTTGAATGAAGATTGATGGAAATTATTTGAATATGTAAAGTAAACTTTAATTGTAAATTTTTTACTACTTCTTTAGTGTCTTTCATAATAGGATTCATTTGGAAATGAGATAACTACCGACTTGGTTTCCAAACACATTTCTAAATTCTAATTAACTCGTACCTTTTTACTTTTTACCTACTTCTCTTTTCAAATTTGAATTTACACATTTTTCAAACACATTTTCAAATCAATCATCATCTAACTTTCCAATCAAATCTAAACAACTTCCAAGCACATCTCTCATTCACTTAAATTATTCTTACTTTTTTTACCTTTTTAATTTTTACCTACTTTTCTTTTCAAATTTGAATCAACACATTTTTCAAACATATTTTCAAATCAATCATCAATCCAATTTTCCAATTAAATTTACACAATTTCCAAACACATTTCTAATTCACTCAAATCATGTCACCCAAGATGAGGACCATGGATCTCGGGTGAATGGTGAGGAGATTGTTGCTATTGTAAACCATTTTATAGACATCAAGATGCAGGATCTTACTTAGGACAATATGATGATAATTCATTAATCTCGAGTATAAGAACAATGAGTATAAGCAGTAACAGCATATAGGAACAAAGTTATGGTTAAGGAAGTTTTTTATTACTCTAGGTATGGTCAAACTAAATACTCATCTTATGGCTATGACTATCATCCTCAACCTCAACCTCGTGATTGTGTCATTCATCCAAATTATCTACCAATGGGATCCATATGTGCTTCATATGAGTCATATTCTACACATTTGAGCAACTACCTTAAAAAACTTTCGGTCTAAGATGACCTTGGAGAACTATTGTAATTTATATCAAAGTTATCAAGATAGTGCACTAGATCCTCTGAGGTCATCTTTTTTGTATTAATTAAGTTACCTATTCTACTTCATGTATCACCACTATTGGTATATAATAGTATTTTATTTTTTAAAATTTCTAAGATTATTTCAATCTTTATATATGTCAATATTTCATATATATTGTTCAATTATGTAACTAAGGACTATATTGGATTAAAAATTATCAATAAAGCAAATTTCAAATCTTATTAGTTATACTTTATACAGTATTAAAATATGAATGTTGCATTGAACAATCATCGAGGTTGTGAGAAATTACAGATTGTAGTGGCATAGTAGGAAAAAGATGAAAATAAAATAACCTTAAAAAAATGACATGTCGACGATATGAGGGGAAATCGACTTTCCCCAATATATATTTATCAAATTTACCGAAAAAAATAGTAAAACTAGCTCTGGAACTATCCTTCTCATGATAAATTAAGACAACAAATATTACACATAACTTATCTCGTATCTTTGAGTCAGATACGATTGTGTCAATTTTGGTCCTGGAAAAGATCTTGAATTCATGAGAGCTTTAGAGAACATAAGCCATTTGAAAAGTTCTCATAGAACCGACCCAATTCTACTCTCACGTAGGTGATATTGATTAAGAGTATTCTGTCACTACTCCTCTTGTAATCAAGATATCAATATTACCTTAATATCAACATATCACACACATAACATCATAGAAATGGGAAGAAACTATAAGTTTCTTAGTGCGTCAACTATGAATTATCCAGCCAGTTTGCCTATTGAACCTAGATCTTGGGATTCTCAGTCAACTAGGTTAGGTTACCACCAGATATATTTCATTTCGTAGGCTTTAGCCCCATTTCCCTCGATGTATATGAAACTTGCTCTCGAGACAATCCTTTCGTCAAAGGATCTGTAATATTTTCTTTTGATTTCACATAATTGATAACTCTTCAAATGAGAGTTATTTTATTATTTATTTGGGTGATTTTATACAAAGAAATGTCAAAGTGTGTCGGTGTTAGCTCTTAAACATCATAAAAAATCTTATAAACCGAACTTCGAGCTAAAGTCCCAGGTCTTGAATGCTTTAGCTAAAAGTGCGCTGAAGTCTCTTATTTCTGGTTTAAATGCACGGATTTGTAAAAGGAAGACAAAGCATGAGAAGAGTGCTGAGCCCAGAGAAGAGTGGATGAAGCATGTTCGAGACAGAGCAGACGAAAGTTGGAGTGAAGCAGCGTGGGAGCATGGAATTACTGCGCAGTAA

mRNA sequence

ATGAACCAAGATGCATTAGCCTTGCCACCAGAACCAATCACTCGTTCAAGGGCCAAGCAGTTACAGCTAGCATTTGCTTCTCACATCCAAAGAGTAGTGAGCCCCACTAATGGACATCAAGAAGATAAAGGTTGCAAACCCGGAACATTCAAGCTAGGTTTGATCAACCTCTTGTGGAGTGTTCAACCTTGTGAGGGAACCAGTTCTCCTTACCTCTTGGTCTTCGATCATCAAGCTAAAAGTGCGCTGAAGTCTCTTATTTCTGGTTTAAATGCACGGATTTGTAAAAGGAAGACAAAGCATGAGAAGAGTGCTGAGCCCAGAGAAGAGTGGATGAAGCATGTTCGAGACAGAGCAGACGAAAGTTGGAGTGAAGCAGCGTGGGAGCATGGAATTACTGCGCAGTAA

Coding sequence (CDS)

ATGAACCAAGATGCATTAGCCTTGCCACCAGAACCAATCACTCGTTCAAGGGCCAAGCAGTTACAGCTAGCATTTGCTTCTCACATCCAAAGAGTAGTGAGCCCCACTAATGGACATCAAGAAGATAAAGGTTGCAAACCCGGAACATTCAAGCTAGGTTTGATCAACCTCTTGTGGAGTGTTCAACCTTGTGAGGGAACCAGTTCTCCTTACCTCTTGGTCTTCGATCATCAAGCTAAAAGTGCGCTGAAGTCTCTTATTTCTGGTTTAAATGCACGGATTTGTAAAAGGAAGACAAAGCATGAGAAGAGTGCTGAGCCCAGAGAAGAGTGGATGAAGCATGTTCGAGACAGAGCAGACGAAAGTTGGAGTGAAGCAGCGTGGGAGCATGGAATTACTGCGCAGTAA

Protein sequence

MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGCKPGTFKLGLINLLWSVQPCEGTSSPYLLVFDHQAKSALKSLISGLNARICKRKTKHEKSAEPREEWMKHVRDRADESWSEAAWEHGITAQ
Homology
[Close]
BLAST of Moc01g15690 vs. NCBI nr
Match: XP_022151643.1 (uncharacterized protein LOC111019551 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1   MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGCK 47
           MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKG K
Sbjct: 548 MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGWK 593

[Close]
BLAST of Moc01g15690 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09
Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0 

Query: 1   MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDK 44
           MNQDALALP  PITRSRAKQLQLAF SHIQ  VS TNGHQEDK
Sbjct: 501 MNQDALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDK 543

[Close]
BLAST of Moc01g15690 vs. ExPASy TrEMBL
Match: A0A6J1DCS9 (uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019551 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 1   MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGCK 47
           MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKG K
Sbjct: 548 MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGWK 593

[Close]
BLAST of Moc01g15690 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.6e-10
Identity = 37/43 (86.05%), Postives = 37/43 (86.05%), Query Frame = 0 

Query: 1   MNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDK 44
           MNQDALALP  PITRSRAKQLQLAF SHIQ  VS TNGHQEDK
Sbjct: 501 MNQDALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDK 543

The following BLAST results are available for this feature:
BLAST of Moc01g15690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151643.12.4e-1597.83uncharacterized protein LOC111019551 [Momordica charantia][more]
XP_022159097.11.2e-0986.05uncharacterized protein LOC111025539 [Momordica charantia][more]
BLAST of Moc01g15690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g15690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DCS91.2e-1597.83uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DYV95.6e-1086.05uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc01g15690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g15690.1Moc01g15690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding