Moc01g15380 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g15380
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr1: 9715916 .. 9716137 (+)
RNA-Seq ExpressionMoc01g15380
SyntenyMoc01g15380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAACCAGCGAATTGGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCGACGTTAGAGGGGCAAGGTCACGACGACCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTAACCCGCTTGCACACCCGAGGACGTCCAAGGCCACCCGTGGCCGACGTGGGACTCTAA

mRNA sequence

ATGGTTCAACCAGCGAATTGGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCGACGTTAGAGGGGCAAGGTCACGACGACCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTAACCCGCTTGCACACCCGAGGACGTCCAAGGCCACCCGTGGCCGACGTGGGACTCTAA

Coding sequence (CDS)

ATGGTTCAACCAGCGAATTGGACCAATACGACGGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCGACGTTAGAGGGGCAAGGTCACGACGACCTAGCAGCGGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGCCCTAACCCGCTTGCACACCCGAGGACGTCCAAGGCCACCCGTGGCCGACGTGGGACTCTAA

Protein sequence

MVQPANWTNTTDRRTLAASDAHQREVGAATLEGQGHDDLAAEPLRRSARITAPALTRLHTRGRPRPPVADVGL
Homology
[Close]
BLAST of Moc01g15380 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-12
Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 1  MVQPANWTNTTDRRTLAASDAHQREVGAATLEGQGHDDLAAEPLRRSARITAPALTRLHT 60
          MVQPAN TNT DRR LAA+  HQREVGA  +EGQGH+DL  EPL RSARIT P L   H 
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAH- 60

Query: 61 RGRPRPPVAD 71
             P+P  A+
Sbjct: 61 ---PKPSKAE 66

[Close]
BLAST of Moc01g15380 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 1  MVQPANWTNTTDRRTLAASDAHQREVGAATLEGQGHDDLAAEPLRRSARITAPALTRLHT 60
          MVQP + TNT DRR L A+D HQREVGA  +EGQ H+ L  EP  RSARIT P L+  H 
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAH- 60

Query: 61 RGRPRPPVADVG 73
             P+P  A+ G
Sbjct: 61 ---PKPFKANRG 68

[Close]
BLAST of Moc01g15380 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.5e-13
Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 1  MVQPANWTNTTDRRTLAASDAHQREVGAATLEGQGHDDLAAEPLRRSARITAPALTRLHT 60
          MVQPAN TNT DRR LAA+  HQREVGA  +EGQGH+DL  EPL RSARIT P L   H 
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAH- 60

Query: 61 RGRPRPPVAD 71
             P+P  A+
Sbjct: 61 ---PKPSKAE 66

[Close]
BLAST of Moc01g15380 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 40/72 (55.56%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 1  MVQPANWTNTTDRRTLAASDAHQREVGAATLEGQGHDDLAAEPLRRSARITAPALTRLHT 60
          MVQP + TNT DRR L A+D HQREVGA  +EGQ H+ L  EP  RSARIT P L+  H 
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAH- 60

Query: 61 RGRPRPPVADVG 73
             P+P  A+ G
Sbjct: 61 ---PKPFKANRG 68

The following BLAST results are available for this feature:
BLAST of Moc01g15380 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152854.11.3e-1262.86uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022159327.13.1e-0955.56uncharacterized protein LOC111025738 [Momordica charantia][more]
BLAST of Moc01g15380 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g15380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DHB36.5e-1362.86uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DZJ11.5e-0955.56uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc01g15380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g15380.1Moc01g15380.1mRNA