Moc01g15090 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g15090
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr1: 9497490 .. 9499424 (-)
RNA-Seq Expression	Moc01g15090
Synteny	Moc01g15090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCTCCACTCAGGTTGACCATACTGCGAAAGCGTATGGAAGATTTGGGGGCCGTTTTCCTCTAGGTTGTCTAGGCATTAACTTTACACTCATCTTAGCCCTAACATAACATTTTGCTATTTATTTATTTGTTTTTGTTTGGGTTGGTGTTAATAAGGTGATGTATAAAAAATGTCTCATTGCATTAAAAATGAGATGTCTCATTGAATAAAAAAAGAGTCTCATTACTTAAAAAAAGGGCCTTAGTGCATTGAAAAGAAGAGTCTTGTTACATTGACATTAACTTTTTCATTTTCATCATTTCATTTTTATTATTATTATGAATTATTTATATATATTTTTTCAAATATTTTTCTAAAAAGTTTGGCAAAATTTTCTTTTTCCCCTTTAAAGTAATTCTCATAAATTGTGCAAACTTTGACCTAAGTCTTAAATCACTAATTTGCAGTAAATTAAAGAATGAGTTATAGTAAAATTCTGACCCAATAATGGGAAGAGGAAGACCAAGAAACTGTCCGCAAATGGTTGAAAAGCAAACATCGTATTCATGGCGATGCCTCATTGAAGAATGTCATAGCACTGTTTCAAAGGACATGAGGAAACTTGTCAATTTGATATCTTAGAAAAAAAATGCTCAAATGACTTGGGGAACAAAGACGAGATCTAGAGCATTGGGGACAATGTTATTGATACGCTGCTTTAATCTATTTTCAATTTAACGATTTAAGCTTTGTGGTTCAAATTTGACCCAATAGTTTGTTTTGTTTCACTCTTGTAATCTTCATTTATTTATAATAAAATCATGAACTTATTTATTTATGGTTTTCTCTCCTTCTATCTTCTATTTTTCTAAAAAAAAAAATACAAAAGGGATTGTTCAAGATAGCTTGCTCACCGGCACTGCATCGCACTTATTGCACCAGACGCAGGGCGAGAATAATAATGGAAGAAAAAAAACCGAGCAGGAGAAAACAAGAAAATATATTGAAGATTTGCGAGAAAAGTTAGATGCCATCCTCCTCGTACTATAAAAAGGCAAGACGGCTACTCATTCTGCTACATCTAACAACCTCGTCCATGAGCCACAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCATGTAACAGAGGGTTTCATGCCACAACATACAACGTACAACCCTCTGTATGACGTCCCGGTTGGTCAGTATCCACATCCCCTTGTTGAGGGAGCTCAACAAATCCCAGCTAACATCATTTTTCGAGAGCCTGAGCAAATGATGCCACTTCCTATGGTCCTTAATATAGGTGGTCTCCCAGTCAAGACAGACCCAGTCGGACAAAGTGCCCCCAGTAACAAGAAGTTCGAAGTTCTGGAAGAAAGATAAAGAGCAGTAGAGTGGACAAACGTTTTTGGCAATATTGATGTCTCTCAATTGTATTTTGTATCTGGATTAGTCATCCCTCCGAAATTTAAGGTGCCAGAATTCGAGAAATATGATGGTTCTTCTTGTCCTAAGAACCACTTATAATGTACTACAGGAAGATGGTAGCGTACGTCCAAAATGACAAACTGTTGATACACTGCTTTCAAGATAGTCTATCTTGTCCAACTTCTCGTTGGTACATGCAATTAGATAACTCTCATGTCGGTTCGTGGAAGAATCTGACCGACTCCTTCCTAAAGCAATATGAGCTTAACATGGACATGGCTCAAGACCGCTTAGATTTGCAAAGAATGGAGAAGAAGAGTAAAAGAAGCTTTAAGGAATACGCCCAAAGATGGAGGGACACAGCAGCTCAGGTTCAACCTCCTTTAACTGATAAGGAGCTATCTTCTATATTTATCAACACTTTAAAGCAGTCCTTCTATGATCGAATGATAGGAAGTGCTTCCACTAATTTATCTGATATTATGACAATCGGAGAAAGAATCTAG

mRNA sequence

ATGAAATTCTCCACTCAGGTTGACCATACTGCGAAAGCGTATGGAAGATTTGGGGGCCGTTTTCCTCTAGGCAAGACGGCTACTCATTCTGCTACATCTAACAACCTCGTCCATGAGCCACAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCATGTAACAGAGGGTTTCATGCCACAACATACAACGTACAACCCTCTGTATGACGTCCCGGTTGGTCAGTATCCACATCCCCTTGTTGAGGGAGCTCAACAAATCCCAGCTAACATCATTTTTCGAGAGCCTGAGCAAATGATGCCACTTCCTATGGTCCTTAATATAGGTGGTCTCCCAGTCAAGACAGACCCAGTCGGACAAAGTGCCCCCAGTAACAAGAAGAAGATGGTAGCGTACGTCCAAAATGACAAACTGTTGATACACTGCTTTCAAGATAGTCTATCTTGTCCAACTTCTCGTTGGTACATGCAATTAGATAACTCTCATGTCGGTTCGTGGAAGAATCTGACCGACTCCTTCCTAAAGCAATATGAGCTTAACATGGACATGGCTCAAGACCGCTTAGATTTGCAAAGAATGGAGAAGAAGAGTAAAAGAAGCTTTAAGGAATACGCCCAAAGATGGAGGGACACAGCAGCTCAGGTTCAACCTCCTTTAACTGATAAGGAGCTATCTTCTATATTTATCAACACTTTAAAGCAGTCCTTCTATGATCGAATGATAGGAAGTGCTTCCACTAATTTATCTGATATTATGACAATCGGAGAAAGAATCTAG

Coding sequence (CDS)

ATGAAATTCTCCACTCAGGTTGACCATACTGCGAAAGCGTATGGAAGATTTGGGGGCCGTTTTCCTCTAGGCAAGACGGCTACTCATTCTGCTACATCTAACAACCTCGTCCATGAGCCACAAGAAACCCCGCCTTATCCACCTGGGTACGGTCCACCTCTTAGGCATGTAACAGAGGGTTTCATGCCACAACATACAACGTACAACCCTCTGTATGACGTCCCGGTTGGTCAGTATCCACATCCCCTTGTTGAGGGAGCTCAACAAATCCCAGCTAACATCATTTTTCGAGAGCCTGAGCAAATGATGCCACTTCCTATGGTCCTTAATATAGGTGGTCTCCCAGTCAAGACAGACCCAGTCGGACAAAGTGCCCCCAGTAACAAGAAGAAGATGGTAGCGTACGTCCAAAATGACAAACTGTTGATACACTGCTTTCAAGATAGTCTATCTTGTCCAACTTCTCGTTGGTACATGCAATTAGATAACTCTCATGTCGGTTCGTGGAAGAATCTGACCGACTCCTTCCTAAAGCAATATGAGCTTAACATGGACATGGCTCAAGACCGCTTAGATTTGCAAAGAATGGAGAAGAAGAGTAAAAGAAGCTTTAAGGAATACGCCCAAAGATGGAGGGACACAGCAGCTCAGGTTCAACCTCCTTTAACTGATAAGGAGCTATCTTCTATATTTATCAACACTTTAAAGCAGTCCTTCTATGATCGAATGATAGGAAGTGCTTCCACTAATTTATCTGATATTATGACAATCGGAGAAAGAATCTAG

Protein sequence

MKFSTQVDHTAKAYGRFGGRFPLGKTATHSATSNNLVHEPQETPPYPPGYGPPLRHVTEGFMPQHTTYNPLYDVPVGQYPHPLVEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPVGQSAPSNKKKMVAYVQNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPPLTDKELSSIFINTLKQSFYDRMIGSASTNLSDIMTIGERI

Homology

[Close]

BLAST of Moc01g15090 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 362.8 bits (930), Expect = 2.4e-96
Identity = 190/298 (63.76%), Postives = 203/298 (68.12%), Query Frame = 0


Query: 24  GKTATHSATSNNLVHEPQETPPYPPGYGPPLRHVTEGFMPQHTTYNPLYDVPVGQYPHPL 83
           GK     ATS+N +HEPQETPPYPPGYGPPLR V EGFMPQ+TTYNPLYDVP+GQYPH  
Sbjct: 32  GKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTF 91

Query: 84  VEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPVGQSAPSNKK------------- 143
           V+GAQQIP NIIFREPEQMM  P V N+GG P KTDPV Q+A S +K             
Sbjct: 92  VKGAQQIPTNIIFREPEQMMSPPTVXNLGGXPAKTDPVXQNAXSXEKXEVLEERLRAIEG 151

Query: 144 -----------------------------------------------KMVAYVQNDKLLI 203
                                                          KM AYVQN KLLI
Sbjct: 152 TDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMXAYVQNXKLLI 211

Query: 204 HCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRMEKKSKRS 262
           HCFQDSL    SRWYMQLD+SHVGSWKNL DSFLKQY+ N+DMA DRLDLQRMEK S  S
Sbjct: 212 HCFQDSLXGXASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTES 271

[Close]

BLAST of Moc01g15090 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 169/260 (65.00%), Postives = 180/260 (69.23%), Query Frame = 0


Query: 62  MPQHTTYNPLYDVPVGQYPHPLVEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPV 121
           MPQ+TTYNPLYDVPVGQY HP V+GAQQIP NIIFREPEQMM  P VLN+G L  KTDPV
Sbjct: 1   MPQYTTYNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPV 60

Query: 122 GQSAPSNKK--------------------------------------------------- 181
           GQ+APSN+K                                                   
Sbjct: 61  GQNAPSNEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCP 120

Query: 182 ---------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYE 241
                    KM AYVQNDKLLIHCFQDSLS P SRWYMQLD+SHVGSWKNL DSFLKQY+
Sbjct: 121 KNHLXMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYK 180

Query: 242 LNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPPLTDKELSSIFINTLKQSFYD 262
            N+DMA DRLDLQRMEKKS +SFKEYAQRWRDTAAQVQPPL DKELS++FINTLK  FYD
Sbjct: 181 HNIDMAPDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYD 240

[Close]

BLAST of Moc01g15090 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 295.0 bits (754), Expect = 6.2e-76
Identity = 164/305 (53.77%), Postives = 187/305 (61.31%), Query Frame = 0


Query: 24  GKTATHSATSNNLVHEPQETPPYPPGY-------GPPLRHVTEGFMPQHTTYNPLYDVPV 83
           GKT    A ++N +HEP  TP +PPG+       GP  R +TEGFM Q+TTYNPLYD+P 
Sbjct: 33  GKTI---AETSNPIHEP-PTPQFPPGFEPSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPA 92

Query: 84  GQYPHPLVEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPVGQSAPSNKK------ 143
           GQ+P PLV G  Q PA IIF+EPEQ++  P VLN+GG     DP  Q APS++K      
Sbjct: 93  GQFPPPLVRGPPQAPAGIIFQEPEQVIAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEE 152

Query: 144 ------------------------------------------------------KMVAYV 203
                                                                 KM AY+
Sbjct: 153 RLRAVEGTDVFGNIDASQLCLXSGLVIPPKFKIPEFEKYBGSSCPKNHLIMYCRKMAAYI 212

Query: 204 QNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRM 262
           QNDKLLIHCFQDSLS P S WYM LD+ HV SWKNL DSFLKQY+ N+DM  DRLDLQ M
Sbjct: 213 QNDKLLIHCFQDSLSGPXSXWYMHLDSXHVXSWKNLADSFLKQYKHNIDMXXDRLDLQXM 272

[Close]

BLAST of Moc01g15090 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-60
Identity = 134/220 (60.91%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 102 MMPLPMVLNIGGLPVKTDPVGQSAPSNKK------------------------------- 161
           MM  P VLN+GGLP KTD VGQ+APSN+K                               
Sbjct: 1   MMSPPTVLNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTYVFGNIDASQLCLVSGL 60

Query: 162 -----------------------------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQL 221
                                        KM AYVQNDKLLIHCFQDSLS P SRWYMQL
Sbjct: 61  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQL 120

Query: 222 DNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPP 262
           D+S+VGSWKNL DSFLKQY+ N+DMA DRLDLQRMEKKS  SFKEYAQRWRDTAAQVQPP
Sbjct: 121 DSSNVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPP 180

[Close]

BLAST of Moc01g15090 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 6.8e-59
Identity = 129/210 (61.43%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 112 GGLPVKTDPVGQSAPSNKK----------------------------------------- 171
           GGLP KTDPVGQ+APSN+K                                         
Sbjct: 62  GGLPAKTDPVGQNAPSNEKFEVLKERLRAIEGTDVFGNIDASQLCLVSRLVIPPKFKVPE 121

Query: 172 -------------------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKN 231
                              KM AYVQNDKLLIHCFQDSLS P SRWYMQLD+SHVGSWKN
Sbjct: 122 FEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSSPASRWYMQLDSSHVGSWKN 181

Query: 232 LTDSFLKQYELNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPPLTDKELSSIF 262
           L DSFLKQY+ N+DMA DRLDLQRMEKKS  SFKEYAQRWRDTAAQVQPPLTDKELS +F
Sbjct: 182 LADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSXMF 241

[Close]

BLAST of Moc01g15090 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96
Identity = 190/298 (63.76%), Postives = 203/298 (68.12%), Query Frame = 0


Query: 24  GKTATHSATSNNLVHEPQETPPYPPGYGPPLRHVTEGFMPQHTTYNPLYDVPVGQYPHPL 83
           GK     ATS+N +HEPQETPPYPPGYGPPLR V EGFMPQ+TTYNPLYDVP+GQYPH  
Sbjct: 32  GKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPHTF 91

Query: 84  VEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPVGQSAPSNKK------------- 143
           V+GAQQIP NIIFREPEQMM  P V N+GG P KTDPV Q+A S +K             
Sbjct: 92  VKGAQQIPTNIIFREPEQMMSPPTVXNLGGXPAKTDPVXQNAXSXEKXEVLEERLRAIEG 151

Query: 144 -----------------------------------------------KMVAYVQNDKLLI 203
                                                          KM AYVQN KLLI
Sbjct: 152 TDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMXAYVQNXKLLI 211

Query: 204 HCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRMEKKSKRS 262
           HCFQDSL    SRWYMQLD+SHVGSWKNL DSFLKQY+ N+DMA DRLDLQRMEK S  S
Sbjct: 212 HCFQDSLXGXASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNSTES 271

[Close]

BLAST of Moc01g15090 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 7.3e-83
Identity = 169/260 (65.00%), Postives = 180/260 (69.23%), Query Frame = 0


Query: 62  MPQHTTYNPLYDVPVGQYPHPLVEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPV 121
           MPQ+TTYNPLYDVPVGQY HP V+GAQQIP NIIFREPEQMM  P VLN+G L  KTDPV
Sbjct: 1   MPQYTTYNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPV 60

Query: 122 GQSAPSNKK--------------------------------------------------- 181
           GQ+APSN+K                                                   
Sbjct: 61  GQNAPSNEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCP 120

Query: 182 ---------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYE 241
                    KM AYVQNDKLLIHCFQDSLS P SRWYMQLD+SHVGSWKNL DSFLKQY+
Sbjct: 121 KNHLXMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYK 180

Query: 242 LNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPPLTDKELSSIFINTLKQSFYD 262
            N+DMA DRLDLQRMEKKS +SFKEYAQRWRDTAAQVQPPL DKELS++FINTLK  FYD
Sbjct: 181 HNIDMAPDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYD 240

[Close]

BLAST of Moc01g15090 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 3.0e-76
Identity = 164/305 (53.77%), Postives = 187/305 (61.31%), Query Frame = 0


Query: 24  GKTATHSATSNNLVHEPQETPPYPPGY-------GPPLRHVTEGFMPQHTTYNPLYDVPV 83
           GKT    A ++N +HEP  TP +PPG+       GP  R +TEGFM Q+TTYNPLYD+P 
Sbjct: 33  GKTI---AETSNPIHEP-PTPQFPPGFEPSFRPAGPSFRPMTEGFMSQYTTYNPLYDIPA 92

Query: 84  GQYPHPLVEGAQQIPANIIFREPEQMMPLPMVLNIGGLPVKTDPVGQSAPSNKK------ 143
           GQ+P PLV G  Q PA IIF+EPEQ++  P VLN+GG     DP  Q APS++K      
Sbjct: 93  GQFPPPLVRGPPQAPAGIIFQEPEQVIAPPTVLNLGGPQANKDPERQEAPSSEKLEVLEE 152

Query: 144 ------------------------------------------------------KMVAYV 203
                                                                 KM AY+
Sbjct: 153 RLRAVEGTDVFGNIDASQLCLXSGLVIPPKFKIPEFEKYDGSSCPKNHLIMYCRKMAAYI 212

Query: 204 QNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRM 262
           QNDKLLIHCFQDSLS P S WYM LD+ HV SWKNL DSFLKQY+ N+DM  DRLDLQ M
Sbjct: 213 QNDKLLIHCFQDSLSGPXSXWYMHLDSXHVXSWKNLADSFLKQYKHNIDMXXDRLDLQXM 272

[Close]

BLAST of Moc01g15090 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 134/220 (60.91%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 102 MMPLPMVLNIGGLPVKTDPVGQSAPSNKK------------------------------- 161
           MM  P VLN+GGLP KTD VGQ+APSN+K                               
Sbjct: 1   MMSPPTVLNLGGLPAKTDLVGQNAPSNEKFEVLEERLRAIEGTYVFGNIDASQLCLVSGL 60

Query: 162 -----------------------------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQL 221
                                        KM AYVQNDKLLIHCFQDSLS P SRWYMQL
Sbjct: 61  VIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQL 120

Query: 222 DNSHVGSWKNLTDSFLKQYELNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPP 262
           D+S+VGSWKNL DSFLKQY+ N+DMA DRLDLQRMEKKS  SFKEYAQRWRDTAAQVQPP
Sbjct: 121 DSSNVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPP 180

[Close]

BLAST of Moc01g15090 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.3e-59
Identity = 129/210 (61.43%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 112 GGLPVKTDPVGQSAPSNKK----------------------------------------- 171
           GGLP KTDPVGQ+APSN+K                                         
Sbjct: 62  GGLPAKTDPVGQNAPSNEKFEVLKERLRAIEGTDVFGNIDASQLCLVSRLVIPPKFKVPE 121

Query: 172 -------------------KMVAYVQNDKLLIHCFQDSLSCPTSRWYMQLDNSHVGSWKN 231
                              KM AYVQNDKLLIHCFQDSLS P SRWYMQLD+SHVGSWKN
Sbjct: 122 FEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLSSPASRWYMQLDSSHVGSWKN 181

Query: 232 LTDSFLKQYELNMDMAQDRLDLQRMEKKSKRSFKEYAQRWRDTAAQVQPPLTDKELSSIF 262
           L DSFLKQY+ N+DMA DRLDLQRMEKKS  SFKEYAQRWRDTAAQVQPPLTDKELS +F
Sbjct: 182 LADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLTDKELSXMF 241

The following BLAST results are available for this feature:

BLAST of Moc01g15090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157796.1	2.4e-96	63.76	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022147189.1	1.5e-82	65.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022155098.1	6.2e-76	53.77	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]
XP_022158986.1	2.8e-60	60.91	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022143495.1	6.8e-59	61.43	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]

BLAST of Moc01g15090 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g15090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ90	1.2e-96	63.76	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1D099	7.3e-83	65.00	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1DM29	3.0e-76	53.77	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]
A0A6J1E2J7	1.3e-60	60.91	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1CNY7	3.3e-59	61.43	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]

BLAST of Moc01g15090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 177..197
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 153..236 e-value: 6.9E-10 score: 39.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g15090.1	Moc01g15090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid