Moc01g14660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g14660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Location	chr1: 9122925 .. 9124334 (-)
RNA-Seq Expression	Moc01g14660
Synteny	Moc01g14660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAATTTTAGCGACGGTGGATGACGCGACGGGAGAAAACCCACTAGATGATGATGGGAATAGCATGGATGTTCAGGAGATAATAGCTTCCATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGAGGAGAGTTCGAGGAAGAAGATAGCAATGACGATATTTCACAATTTGAAGTCCGTATATGCACTCCAGTACATGAATCATAGCAAGATGATGAGGTAATACCTTCTTCGGTCAAGGAAGGAGCGTCCGGTTCTTTGGATGCCCCACAAGAAGCTACGAAGTCATCCTTATCTTCCTCCAAAGGTTTGTCTCCCTCCCTTTCAACTATGAACGTATCTGACCCTAATTTCGTCGTTGTTGTAGAGGGCTCAGAAGAGGAGGTATGTTTGGGTAAAATGGTGAAGAAAACAAAGAAAGAGAAAAATTCGGCCCAAAAAGCGCCAGATGCTTTTTCAAGACCATGCACCTGGGTCGCAGTAGCGAGATTGGCAGCCCAAAATTCAGCTGGGGTTGGTCCATCTAAAAAAGCCAAGAGGTCTAGGCCACTTGGAAAGGCTGAAGAGCAACCCGAAGAGGCCGACGAAGAGGAGGTCGTTGCTACCGAGGCGCGACCAGAAAAGGCTAAAGAGGTGATATAGAAGTGAAGAACCTGACTTTACAGCCCGAGGACTCTTGCTTGAGAAGGGATTTGATGAGGAACAGGAGCCCGTGCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAAACTTTGTTTGCTCCCCCTACACGTGTTTCGGAAGCCTTGGTGATATGCTGCCATTCACTTAAAGCGAGGAGATGTCGTGAGAATAAGGGGTAGGTTGGTAAGGATTTTTCCTATGATTATTAATACTCACTTTGGTTTGTCGAATGTGTTTAATACAGTAGGTAATGGAATTATTGTGCATCCGACTAATGAGCAAGTGGAAGAGGCACAAAAACTCATATGTAGGCCACACAAGACATAGACTGTCTTGCAAAAGGGGAAAGCTTTCGCTAGCATCACTTGACATCAATGAAAAAGGTTCACGGTGTGGACTTATGTTATGAAGAACTGATTGATCCCTACCTCACATGATGCCACCATCAACGTAGCAAGGTGACGTTGGTGTAATATCTGATGAAGGGCATTGAGTTCAGCTTTGGCCAACTCATAAGAGACGAACTTCGGGTTTGCTCTAAGAAAATGGTAGGTCCTCTTGTTTTTCTTGCGCTTGTAACAGAATTATGTTTGAAAGCAGGTGTAGAAGTCGATGTTGAAGATGTGGTGACGCCCAAAAAGTCAGCCACGTCCATGAGACGAGTTCGGGGATATTCGATAGTTCTTGAGGAGGACTCTTCCACTACTATCGCGGATCCCGAGACCTGA

mRNA sequence

ATGGCCGAAATTTTAGCGACGGTGGATGACGCGACGGGAGAAAACCCACTAGATGATGATGGGAATAGCATGGATGTTCAGGAGATAATAGCTTCCATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGAGGAGAGTTCGAGGAAGAAGATAGCAATGACGATATTTCACAATTTGAAGTCCGTATATGCACTCCAGTACATGAATCATAGCAAGATGATGAGAGGGCTCAGAAGAGGAGTAGCGAGATTGGCAGCCCAAAATTCAGCTGGGGTTGGTCCATCTAAAAAAGCCAAGAGGTCTAGGCCACTTGGAAAGGCTGAAGAGCAACCCGAAGAGGCCGACGAAGAGGAGGTCGTTGCTACCGAGGCGCGACCAGAAAAGGCTAAAGAGGAGCCCGTGCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAAACTTTGTTTGCTCCCCCTACACGTGTTTCGGAAGCCTTGGTGATATGCTGCCATTCACTTAAAGCGAGGAGATGTCGTGAGAATAAGGGCTTTGGCCAACTCATAAGAGACGAACTTCGGGTTTGCTCTAAGAAAATGGTAGGTCCTCTTGTTTTTCTTGCGCTTGTAACAGAATTATGTTTGAAAGCAGGTGTAGAAGTCGATGTTGAAGATGTGGTGACGCCCAAAAAGTCAGCCACGTCCATGAGACGAGTTCGGGGATATTCGATAGTTCTTGAGGAGGACTCTTCCACTACTATCGCGGATCCCGAGACCTGA

Coding sequence (CDS)

ATGGCCGAAATTTTAGCGACGGTGGATGACGCGACGGGAGAAAACCCACTAGATGATGATGGGAATAGCATGGATGTTCAGGAGATAATAGCTTCCATTAGAGAGGATGAGATTCTTGAAGATTTGCCCCAAGAAGAGGAGAGTTCGAGGAAGAAGATAGCAATGACGATATTTCACAATTTGAAGTCCGTATATGCACTCCAGTACATGAATCATAGCAAGATGATGAGAGGGCTCAGAAGAGGAGTAGCGAGATTGGCAGCCCAAAATTCAGCTGGGGTTGGTCCATCTAAAAAAGCCAAGAGGTCTAGGCCACTTGGAAAGGCTGAAGAGCAACCCGAAGAGGCCGACGAAGAGGAGGTCGTTGCTACCGAGGCGCGACCAGAAAAGGCTAAAGAGGAGCCCGTGCCAGATTATGTCAAGCGCCAACTTGTGGAGCAAGGTTGGGAAACTTTGTTTGCTCCCCCTACACGTGTTTCGGAAGCCTTGGTGATATGCTGCCATTCACTTAAAGCGAGGAGATGTCGTGAGAATAAGGGCTTTGGCCAACTCATAAGAGACGAACTTCGGGTTTGCTCTAAGAAAATGGTAGGTCCTCTTGTTTTTCTTGCGCTTGTAACAGAATTATGTTTGAAAGCAGGTGTAGAAGTCGATGTTGAAGATGTGGTGACGCCCAAAAAGTCAGCCACGTCCATGAGACGAGTTCGGGGATATTCGATAGTTCTTGAGGAGGACTCTTCCACTACTATCGCGGATCCCGAGACCTGA

Protein sequence

MAEILATVDDATGENPLDDDGNSMDVQEIIASIREDEILEDLPQEEESSRKKIAMTIFHNLKSVYALQYMNHSKMMRGLRRGVARLAAQNSAGVGPSKKAKRSRPLGKAEEQPEEADEEEVVATEARPEKAKEEPVPDYVKRQLVEQGWETLFAPPTRVSEALVICCHSLKARRCRENKGFGQLIRDELRVCSKKMVGPLVFLALVTELCLKAGVEVDVEDVVTPKKSATSMRRVRGYSIVLEEDSSTTIADPET

Homology

[Close]

BLAST of Moc01g14660 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 6.8e-19
Identity = 99/287 (34.49%), Postives = 120/287 (41.81%), Query Frame = 0


Query: 80   RRGVARLAAQNSAGVGPSKKAKRSRPLGKAEEQPEEADEEEVVATEARPEKAK------- 139
            R  VARLAAQ  A  GPSKKAK +R    AEE  EEA+EEE  +TE  P + K       
Sbjct: 1059 RTAVARLAAQKEAEAGPSKKAKTARVQRVAEEPLEEANEEEPDSTEQTPSRVKRVRLEVR 1118

Query: 140  ------------------EEPVPDYVKRQLVEQGWETLFAPPTRVSEALV---------- 199
                              +EPVP+YV++++VE GWETLFAP TRVSEALV          
Sbjct: 1119 RPTFTTRDILLERGFDEAQEPVPEYVRKRIVENGWETLFAPITRVSEALVKEFYTAINPN 1178

Query: 200  -----------ICCHSL-----KARR--CRENK--------------------------- 256
                       I  H       +ARR  CR +K                           
Sbjct: 1179 RGDEVRVRGNEILVHPSDEQVEEARRLICRPHKTWTISTMGKLSLKPLDINEQATVWMYV 1238

[Close]

BLAST of Moc01g14660 vs. NCBI nr
Match: XP_022159289.1 (uncharacterized protein LOC111025702 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-18
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 181 FGQLIRDELRVCSKKMVGPLVFLALVTELCLKAGVEVDVEDVVTPKKSATSMRRVRGYSI 240
           F +LIR+E+ VC++KMVGPL+F A + ELCLKAGVE DVEDVV  KKSATS+RRVRGY I
Sbjct: 38  FSELIRNEIWVCAEKMVGPLIFPARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLI 97

Query: 241 VLEEDSSTTIADPET 256
           V EEDS  T ADP+T
Sbjct: 98  VREEDSPITAADPDT 112

[Close]

BLAST of Moc01g14660 vs. NCBI nr
Match: XP_022158483.1 (uncharacterized protein LOC111024964 [Momordica charantia])

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-11
Identity = 86/259 (33.20%), Postives = 118/259 (45.56%), Query Frame = 0


Query: 1   MAEILATVDDATGENPLDDDGNSMDVQEIIASIREDEILEDLPQE---EESSRKKIAMTI 60
           + +IL  +++ATGE+PL+DDGNS + Q  +    EDE L DLPQE   +E   ++    I
Sbjct: 184 ITKILVALNEATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDI 243

Query: 61  FHNLKSVYALQYMNHSKMMRGLRRGVARLAAQNSAGVG-PSKKAKRSRPLGKAEEQPEEA 120
                 ++ L +    +  R       R+    S  V  P++   +S      +   EE 
Sbjct: 244 SQYEVRIHILVH----ESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSSKDNSKEEV 303

Query: 121 DEEEVVATEARPEKAKEEPVPDYVKRQLVEQGWETLFAPPTRVSEALVICCHSLKARRCR 180
           +EEE  +TE +  KAK                         RV EALV   ++       
Sbjct: 304 NEEEPTSTEQQASKAK-------------------------RVLEALVKEFYA----AIH 363

Query: 181 ENKGFGQLIRDELRVCSKKMVGPLVFLALVTELCLKAGVEVDVEDVVTPKKSATSMRRVR 240
            N+G      D +RV                      G++ + EDVVTPKKSATSMRRVR
Sbjct: 364 PNQG------DAVRV---------------------RGMKANDEDVVTPKKSATSMRRVR 382

Query: 241 GYSIVLEEDSSTTIADPET 256
           GY IV EEDSS T+ADPET
Sbjct: 424 GYLIVREEDSSITVADPET 382

[Close]

BLAST of Moc01g14660 vs. NCBI nr
Match: XP_022156786.1 (uncharacterized protein LOC111023620 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-09
Identity = 48/110 (43.64%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 80  RRGVARLAAQNSAGVGPSKKAKRSRPLGKAEEQPEEADEEEVVATEARPEKAK------- 139
           R  +A LAAQ  A  GP KKAKR + L ++EE  +E ++EE+ + E  P KAK       
Sbjct: 95  RATIASLAAQKEAEAGPFKKAKRVKGLRRSEEPLDEVNDEELDSIEQTPSKAKRVRWEVK 154

Query: 140 ------------------EEPVPDYVKRQLVEQGWETLFAPPTRVSEALV 165
                             +EPVP Y+KR+L+E GWETLFAP  RVSE LV
Sbjct: 155 RVNFTAREILVEKGFDEAQEPVPKYIKRRLLENGWETLFAPTMRVSETLV 204

[Close]

BLAST of Moc01g14660 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19
Identity = 99/287 (34.49%), Postives = 120/287 (41.81%), Query Frame = 0


Query: 80   RRGVARLAAQNSAGVGPSKKAKRSRPLGKAEEQPEEADEEEVVATEARPEKAK------- 139
            R  VARLAAQ  A  GPSKKAK +R    AEE  EEA+EEE  +TE  P + K       
Sbjct: 1059 RTAVARLAAQKEAEAGPSKKAKTARVQRVAEEPLEEANEEEPDSTEQTPSRVKRVRLEVR 1118

Query: 140  ------------------EEPVPDYVKRQLVEQGWETLFAPPTRVSEALV---------- 199
                              +EPVP+YV++++VE GWETLFAP TRVSEALV          
Sbjct: 1119 RPTFTTRDILLERGFDEAQEPVPEYVRKRIVENGWETLFAPITRVSEALVKEFYTAINPN 1178

Query: 200  -----------ICCHSL-----KARR--CRENK--------------------------- 256
                       I  H       +ARR  CR +K                           
Sbjct: 1179 RGDEVRVRGNEILVHPSDEQVEEARRLICRPHKTWTISTMGKLSLKPLDINEQATVWMYV 1238

[Close]

BLAST of Moc01g14660 vs. ExPASy TrEMBL
Match: A0A6J1E204 (uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025702 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-19
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 181 FGQLIRDELRVCSKKMVGPLVFLALVTELCLKAGVEVDVEDVVTPKKSATSMRRVRGYSI 240
           F +LIR+E+ VC++KMVGPL+F A + ELCLKAGVE DVEDVV  KKSATS+RRVRGY I
Sbjct: 38  FSELIRNEIWVCAEKMVGPLIFPARIMELCLKAGVEADVEDVVMSKKSATSIRRVRGYLI 97

Query: 241 VLEEDSSTTIADPET 256
           V EEDS  T ADP+T
Sbjct: 98  VREEDSPITAADPDT 112

[Close]

BLAST of Moc01g14660 vs. ExPASy TrEMBL
Match: A0A6J1DW79 (uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024964 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.5e-11
Identity = 86/259 (33.20%), Postives = 118/259 (45.56%), Query Frame = 0


Query: 1   MAEILATVDDATGENPLDDDGNSMDVQEIIASIREDEILEDLPQE---EESSRKKIAMTI 60
           + +IL  +++ATGE+PL+DDGNS + Q  +    EDE L DLPQE   +E   ++    I
Sbjct: 184 ITKILVALNEATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDI 243

Query: 61  FHNLKSVYALQYMNHSKMMRGLRRGVARLAAQNSAGVG-PSKKAKRSRPLGKAEEQPEEA 120
                 ++ L +    +  R       R+    S  V  P++   +S      +   EE 
Sbjct: 244 SQYEVRIHILVH----ESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSSKDNSKEEV 303

Query: 121 DEEEVVATEARPEKAKEEPVPDYVKRQLVEQGWETLFAPPTRVSEALVICCHSLKARRCR 180
           +EEE  +TE +  KAK                         RV EALV   ++       
Sbjct: 304 NEEEPTSTEQQASKAK-------------------------RVLEALVKEFYA----AIH 363

Query: 181 ENKGFGQLIRDELRVCSKKMVGPLVFLALVTELCLKAGVEVDVEDVVTPKKSATSMRRVR 240
            N+G      D +RV                      G++ + EDVVTPKKSATSMRRVR
Sbjct: 364 PNQG------DAVRV---------------------RGMKANDEDVVTPKKSATSMRRVR 382

Query: 241 GYSIVLEEDSSTTIADPET 256
           GY IV EEDSS T+ADPET
Sbjct: 424 GYLIVREEDSSITVADPET 382

[Close]

BLAST of Moc01g14660 vs. ExPASy TrEMBL
Match: A0A6J1DW11 (uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023620 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09
Identity = 48/110 (43.64%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 80  RRGVARLAAQNSAGVGPSKKAKRSRPLGKAEEQPEEADEEEVVATEARPEKAK------- 139
           R  +A LAAQ  A  GP KKAKR + L ++EE  +E ++EE+ + E  P KAK       
Sbjct: 95  RATIASLAAQKEAEAGPFKKAKRVKGLRRSEEPLDEVNDEELDSIEQTPSKAKRVRWEVK 154

Query: 140 ------------------EEPVPDYVKRQLVEQGWETLFAPPTRVSEALV 165
                             +EPVP Y+KR+L+E GWETLFAP  RVSE LV
Sbjct: 155 RVNFTAREILVEKGFDEAQEPVPKYIKRRLLENGWETLFAPTMRVSETLV 204

The following BLAST results are available for this feature:

BLAST of Moc01g14660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154847.1	6.8e-19	34.49	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]	[more]
XP_022159289.1	1.2e-18	70.67	uncharacterized protein LOC111025702 [Momordica charantia]	[more]
XP_022158483.1	5.2e-11	33.20	uncharacterized protein LOC111024964 [Momordica charantia]	[more]
XP_022156786.1	4.9e-09	43.64	uncharacterized protein LOC111023620 [Momordica charantia]	[more]

BLAST of Moc01g14660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g14660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMT3	3.3e-19	34.49	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia...	[more]
A0A6J1E204	5.6e-19	70.67	uncharacterized protein LOC111025702 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DW79	2.5e-11	33.20	uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DW11	2.4e-09	43.64	uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc01g14660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g14660.1	Moc01g14660.1	mRNA