Moc01g14610 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g14610
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr1: 9068121 .. 9074843 (+)
RNA-Seq ExpressionMoc01g14610
SyntenyMoc01g14610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGATAATAAACCACAAAGGAAGGTTGTGTTAAATGAGATTTCCGATGAAACTACAAATACATCAACAATAGTTGTTGATAAAGCTAGCACTTCAACAAGAGTTGTTGATGGCGATAGTACATCACGTCAGTCACATCCATTTCAAGAGTTGAGAGTGCCTCGACATAGTGGTAGGATTGCGTCACAACCTGATCGTTATGTGGATTTAACAGAAATCCAGGTCGTCTACCTGATGATGGCGTTGAGGATCCATTGTTCTACAAAAAGGCAATGAGAGATGTTGATAAGGACAAATGGGTCAAAGCTATGGACCTTGAAATGCAGTCTATGTACTTCAATTCTGTCTAGAACCTTGTAGATCAACCTGATAGGGCCAAACCTATAGGTTGTAAGTGGATCTACAAGAGAAAACGAGACACCGAAGGAACGGTATAGACCTTTAAGGCTAGACTCGTGGCAAAGGGTTACACCCAAAGGGAAGGGGTGGACTATGAAGAAACTTTCTCCTCGGTTGCCTTGCTAAAGTATATAAGAATACTCTTGTCCATTGCCACGTTTTCTAACTATGAAATTTGACAAATCGATGTCAAGACTGCTTTCCTGAATGACAATCTTGAAGAGAGTATTTATATGTCTCAACCAGAAGGGTTCATTAATTAAGCAAGGTCAAGAAAAAAAGGTTTGCAAGCTTAAAAGATCCATTTATGGATTAAAACAAGCATCTCGATCTTGGAATATAAGATTTGATACTGCAATCAAGTCTTATGGTTTTGACCAAAATGTTGATGAGCCTTGTGTATACAAGAAAATCATCAATAACACTGTAGCTTTCTTGGTGTTGTCTGTGGATGATACCCTAATCATTGGGAATGATGTAGGTTTCCTAATTGACATTAAGAAGTGACTAGCAACTGAATTCCAAATGAAAGATTTGGGAAACGCTCAGTTTGTTCTGGGGATTCAAATCATAAAGAATCGAAAGAACAAAACGCTAGCCCCATCTTAGGCAACTTATATCGACAAAATGCTTGTCAGATATTAAATGCAGAATTCCAAGAAAGAGTTACTACCTTTCAGGCACGGAATCTCTCTGTCTAAGGAACAATGTCCCAAGACACCTCAAGAAGTTGAGGATATGATATGCATTTCATATGATTCAGCAGTGGGCAGCCTGATGTATGTCATGTTGTGTAGTAGGCCTGATATTTGCTATGCAGTAGAGATTGTCAGTAGGTATCAATCTAATCCAGGATATGATCACTAAACTGGCGTTAAGGGAATCCTCAAGTATCATAGGAAAAAGAGGAACTATATGCTTGTGTACGGCGCTAACGATTTGATCCTTACAGATACATTGACTCTGATTTCCAAAGTGATAAGAATTCAAGGAAATCCATTTCGGGATCAGTGTTCACTCTTAATGGAGGAGTTGTAGTATCGCAAAGCATCAAACAAGGATACATCGCAGACTCCACAATAGATGTCGAATATGTTGCCACTTGTGAAGAAGCAGAAGAGGCGGTGTGGTTTAGAAAGTTTTTAACTGATTTGGAAGTTGTTCCAAACATGACTTTGTCCATCACACTTTATTGTGATAACAGTGGTGCTGTGGAAAATTCTAAAGAACCCTGAAGTCACAAAAGAGGCAAGCACATCGAGAGAAAGTATCACTTGATAGAGAAATTGTGCAGCGAGGGGACGTGATCATCACGAAGAAAGCTTCGAAGCATAACATTGCTGATCTGTTTACAAATGCTCTTACAGCTAAAGTGTTTGAGGGCCATTTAGAAAGTCTAGGCCTACGAGATATGTACAATGTATTCTAGGGTAAGTGGGAAACTTATAAAGGGTACAGTGTATGCTCTAGTTTATCGTATTTATACTTTATTGTACAACCCACTGTTGCTTTTAGATCTTGTACACCGCACTAGAGTTTAGTTCAAGTGAGAGTTTGTTGGGTTTTATCCCCTAAACTCGTGGTTTGTAAACATAAAACAAATATTTATTCAATAAAGTTGTTATTGACGTTTCTCTTAGAATTGCATTAACCCAAATCCAATAAACTAACATCCAAGGTTATGTCATGTAACTGGAATTGTATATAACAGATATATAGTATATATTTAATGTACAATGGTATATATTTGATATATAGTGTATACAGTGTATATATATACACTATATATTCGATATACACGTAGATAATGTTCCAGTAATAACCTCAAGGGTCTATAATATATGGATAAGGTTGGGTACCTTATCTTGGTAATATTATGGATACGGCCCACTTTGTAATAGTTACAAATGACATGATCCAAGTCGTTCATGTGGAGATATGCGAGTGAGGGTACCCTATACAATAGTTTGTACAAGACCGGACTGCGAAATAATTAATCTTTAGCTGTAACACCGTTAGCTAATAGATTAATATTTCAATAGGATAACCAAGTAACTCGATCTCAATCATGAGTGAGTTGTGGACTCCTGCCTGTTAGGGCTCGTCCTTTGATTTGTATGGGTGAGAGTAGCCCGAGTTGCCAACTCAATATTGCTACCATTTTGGGGACGAGACCGAGTGGGGAGCTGGAAACATAACTACACAAGATGGAATTCACTTCTTCCGACTTTAGGGTAAGTAGATGAGTGTTCTCTTAAGTGCTGACTCTAGGACTTGAACAAGGGGCCCCACCCTCTCCCTGACCCGAAAGGGACTTCTGGTTATTGGTCGGACCATAACCAGGTTGTTCATTAGAGGATCAGCGGTAGGTACAAGATGTAACGTAGGGGTAAAATGGTAATTTGATCCAAATATGGTTAAGGACACTCGTGAAGGATTGACTTGCCGTTAATGGTCAATATCCATGGTCAGAAAATCTTCTACAGTGAGAAGAGTGCTGCTGTGGGTCTTTAGTGGAGTGACCGACAGTTAACGAATGTTGATTAATATGGTTAATGAGTTTAATCAATTAATCTCGTATCGTTGGAGCTTTTGATCTGTAGGTCCATTAGGTCTCCTTGCTAGGCAATCTGTCAATTTGTCTTGCGGTTCAATGTGAGCCCTATGCAAAAATGATTGTTACGTAAGTTGCGAAAGGCCACTATATTGTTAGCGACTTTCACAGGCTTGAATCAGGTATCTTTGTTATTTGCAGTGGGGTTAGTGGAATCTGCCCAAATCCAATGAGGACTGAGTCTCCAAAATTTAGCAAAGTGGTTCAACTTAATACGAACATCCCCATGTCTTGTGATTGAAACCTCATTTCCCATTGTTGAGTCTGTCATGTCATTCGTAGAAAATTCTTGATACTCATGTCTTTGAAACCATATTGCTTTGAGGAACGATTACCACCTTTGAATGCAATGTGTTTGGGCAAAATAAAGAATGATTCCCAATCCATAGCAATATGGAGGTCACCAAGGTTACGGAGTGGAGTTGAAGATGTCATGATGAATAAGCATGCATTACGAATTGAACCATCCCTCAAACTACATGAGTTGAACCCAAGTTGGACATGCTTAATTAGGTATGCTTGACTACCAGAATCATAGATGGGTTCAAACTGTTAAGAGTGCTCGCTAATGTGTAATTAGAATTAGGTTTTTATTATGTTTTCATTTATGTTTCAATTAGTTTTTATTCTGTTTTAAATTAGTTAAATGGAGATTATTTATTTCACTGTATTTGGCTATTGGGATATAAAAACCCATCTTTCGATCACATAAAGTTAAGGAGAATTGATTCAAACTTTTCGTGCTCATTATTCTCTCTCTCATTCCTTAGTTTACAATTTAGAAAATTTGTTATGGTATCAGAGCATTAAGTCAAATGACTCAAAGCTCCTGCATGACGTCTTCATTCTTAGAGACAAATTAGAATTTTTTGCTTATCTATCCTGCGAACAAGATCGTAACGGTGAAATTGAATGACGTGAATTTTCTACTGTGGCGATTATAAGTTACTATAGCGCTGCAAGGTCATGACTTAGACAAATTTATCGGTCCAGAGGCACAAATTCCACCAGAATTCATCAGATCTGAAGGTGAATCATCTTCCACTGCAATTATAAATAAAGAATTTCTTAATTGGAAGAGACGAGGCAAATTAATCACTTCATGGCTCCTTGGGTCCATGACTGAAGAAATTTTATCACAGATGCTCGAGTGTGAAACAGCCAACGAAGTCTGGACAATTCTGAATAATTTGTTTTCTTCACGTAATTTAGCTAGAGTTATGGAATTGAAATCAAAACCAGAGAATTTAAAGAAAGGAAGTCTCAATCTTAAGGATTATTTCCTAAAGGTAAAAACTATTGCAGATTCGTTGGCTGCCGCAAGTAAGAAACTCTCAAAGAATGATGATATTATGCATCTTCTTGCTGGTCTTGGAATTGACTTTGATGTTACGGTTTCTGTAATTTCGGCTGGAAAAGAAATTCCAACACTCCAAGAGGTTTATTCACTTCTCTTAGCTCAAGAAGCACGAAATGAGAGGAATAATGCACAAATTAATTCTGATGCATCTGTATCTTCTATTAATGTTACCACCCAAGACCATCAGAAGAGAGGAAATTTTTCGAATTCTGCAGAAACTAGAACCAACTGGAACAATAACGAGGCAGAGGAAATAATCGATCCAATAACAATTGGAATCGAGGTCGAATTTGGAGTATTAACTCTAGAATCCAATGTCAGTTGTGCGGGAAATTCGGCCATACTGACGTGAAATGTTATAAGCGATTCGATCGCACTTATCAAGGTCCCAACACTCAGCATAATTCTTCTCTTAATTTACAGACTAATTCTCCCTTTGTTCCATGACCTATCTTTCAACAACATCAACAACAGGTTCCAATGAATGCATTTATGGTTTCTCTAGATCTGAACAATGATACAAATTGGTATCCTGATTCGAGCGCCTCAAACCATGTCACACATAATCTTGGAAATCTATCCATTGGAGCTTAATATCATGGAAGAAACAAAGTTCACGTTGGTAATGATATGGGTTTAGATGTTCTTCATATGGGTTTAGATATTCTTCATACTCGTGCTTCTCTACTTCATTCTACTTCTCCTCAATTGTCTTCCAATACTTTTCTCCTCAAGAATCTTCTTCATGTACCACATACTACAAAGGATCTCTTTTAGCTTTAGTCAATTTGCCAAAGATAATGCTGTTTTCTTTGATTTTCCCCCATATAATTGCTTTGTGAAGGATATCCAATCTGGACAAATACTTCTCATGGGTAAAGTCAATGATGGGATGTACGAATTCTCCTTGACAAAGACCTCTTCCGCCCCTGTCTCTGCTCATATTTCTTATTGTAATAAAGTTGGTATTGCTTTATCGGCTTTTACTTCTCAGAATTCTCATAAATCTACTATTCATTCATTAAATGACAGTTGTAATTTTTCTATTCCTATTGCTTCTGTTTCTTCTGTATTAGACATATGGCATTGGCGTCTTGGCCACCTTACTCTTAATACCGTGCAAAATGTTCCTGATTCATGTAATATTTCCTATTCTCGAAATAAAATACCATTGGAACCTGTGCTCTTGGTAAGAGTCATAATCTTCGTTTCTACGATTCTCTTGCCACTAATAATGCTCCACTTCAATTTATTGTTGCTGATGTTTGGGGTCCAGCTTTCAAAACGTATCATAATGGCTATAAATACTACATTAGCATTAGCTTTGTTGATGTATTCTTCCGTTATACTTGGGTCTATTTCCTCAAAACTAAATCTGAGGCTTTTAAGGCCTTTTTGCTGTTTAAAACTTATGTTGAGAAATTATTTGGAATTTCCATTCTTGGTCTCCAAACTGATGGTAGGGGTGCATTTAAATCTTTCAGTCAATTTCTCGAATCTCAGAGGATTGAACATCGTATGGCTTGTCCTTATACATCCCAACAAAATGGAATTGTAGAACGAAAACATCGACATATTGTTGACACTGGCCTCACCTTATTGTCTCATGCTTCTCTTTCTTTACAATTTTGAGATGATGCATTTTCCACTGTTTATCTTATTAACCTTCTTCCATGTACAATTCATCGTGGTCTTTTGCCTATGAAAGTTTTGTTTGGTTTAAAACCCAATTATTCCTTTCTAAAAGTGTTTGGTTGTCTATGTTACCCTTCTCTACGTCCTTACAATAAACATAAAATTAAACCACGTTCAACCCCTTGTATTTTTCTTCGTTACAGCAATGTTTACAAGGGTTATAAGTGTCTTTCATTTTCAGGTCGTTTATTCATCTCACGCTATATTTTTTTTAATGAATATCATTTTCCAGCTGCTACCAAGTCATCTCAATTTTCTTCTTTTGATCAATTGTCTACATCTCAGTCGTACTTGCCTATTATTTCTTCACCTATTCATTCATCTATTGTACCTCCTCACGCACCTACTATTGCTCCATCCTCAGACCAACAATCATCTTTTATTGTTTCTTCTTTCGTCCAACGGTCTTCAATTGATGATGTACCTACCCCTGATACTTCACATCCAACATTTAATGCTCCCACCATAACCTGTCTTGACACTGTCATTCCTTTATGTACTAATGCAACTCTATCTTCTCCAATTTTAAATTATAATTCCGCATCTTTACCTTTGTCTTCTTCTGTGAATGAAGAGCCAGTATGTAGTTCTTCTCCATCGCATTCTTTACCTTCGTGTTCTGCCTCTTTACCTTCCAGTTCTACGTCACTAG

mRNA sequence

ATGAGAGATAATAAACCACAAAGGAAGGTTGTGTTAAATGAGATTTCCGATGAAACTACAAATACATCAACAATAGTTGTTGATAAAGCTAGCACTTCAACAAGAGTTGTTGATGGCGATAGTACATCACGTCAGTCACATCCATTTCAAGAGTTGAGAGTGCCTCGACATAGTGGTCCATTAGGTCTCCTTGCTAGGCAATCTGTCAATTTGTCTTGCGGTTCAATTGGGGTTAGTGGAATCTGCCCAAATCCAATGAGGACTGAGTCTCCAAAATTTAGCAAAGTGGAACGATTACCACCTTTGAATGCAATGTGTTTGGGCAAAATAAAGAATGATTCCCAATCCATAGCAATATGGAGGTCACCAAGGTTACGGAGTGGAGTTGAAGATGTCATGATGAATAAGCATGCATTACGAATTGAACCATCCCTCAAACTACATGAGTTGAACCCAACGCTGCAAGGTCATGACTTAGACAAATTTATCGGTCCAGAGGCACAAATTCCACCAGAATTCATCAGATCTGAAGGTGAATCATCTTCCACTGCAATTATAAATAAAGAATTTCTTAATTGGAAGAGACGAGGCAAATTAATCACTTCATGGCTCCTTGGGTCCATGACTGAAGAAATTTTATCACAGATGCTCGAGTGTGAAACAGCCAACGAAGTCTGGACAATTCTGAATAATTTGTTTTCTTCACGTAATTTAGCTAGAGTTATGGAATTGAAATCAAAACCAGAGAATTTAAAGAAAGGAAGTCTCAATCTTAAGGATTATTTCCTAAAGGTAAAAACTATTGCAGATTCGTTGGCTGCCGCAAGTAAGAAACTCTCAAAGAATGATGATATTATGCATCTTCTTGCTGGTCTTGGAATTGACTTTGATGTTACGGTTTCTGTAATTTCGGCTGGAAAAGAAATTCCAACACTCCAAGAGGTTTATTCACTTCTCTTAGCTCAAGAAGCACGAAATGAGAGGAATAATGCACAAATTAATTCTGATGCATCTGTATCTTCTATTAATGTTACCACCCAAGACCATCAGAAGAGAGGAAATTTTTCGAATTCTGCAGAAACTAGAACCAACTGGAACAATAACGAGGCAGAGGAAATAATCGATCCAATAACAATTGGAATCGAGGTCGAATTTGGAGTATTAACTCTAGAATCCAATGTCAGTTATATTCTTCATACTCGTGCTTCTCTACTTCATTCTACTTCTCCTCAATTGTCTTCCAATACTTTTCTCCTCAAGAATCTTCTTCATGATATCCAATCTGGACAAATACTTCTCATGGGTAAAGTCAATGATGGGATGTACGAATTCTCCTTGACAAAGACCTCTTCCGCCCCTGTCTCTGCTCATATTTCTTATTGTAATAAAGTTGGTATTGCTTTATCGGCTTTTACTTCTCAGAATTCTCATAAATCTACTATTCATTCATTAAATGACAGTTGTAATTTTTCTATTCCTATTGCTTCTGTTTCTTCTGTATTAGACATATGGCATTGGCGTCTTGGCCACCTTACTCTTAATACCGTGCAAAATGTTCCTGATTCATGTAATATTTCCTATTCTCGAAATAAAATACCATTGGAACCTGTGCTCTTGAGCCAGTATGTAGTTCTTCTCCATCGCATTCTTTACCTTCGTGTTCTGCCTCTTTACCTTCCAGTTCTACGTCACTAG

Coding sequence (CDS)

ATGAGAGATAATAAACCACAAAGGAAGGTTGTGTTAAATGAGATTTCCGATGAAACTACAAATACATCAACAATAGTTGTTGATAAAGCTAGCACTTCAACAAGAGTTGTTGATGGCGATAGTACATCACGTCAGTCACATCCATTTCAAGAGTTGAGAGTGCCTCGACATAGTGGTCCATTAGGTCTCCTTGCTAGGCAATCTGTCAATTTGTCTTGCGGTTCAATTGGGGTTAGTGGAATCTGCCCAAATCCAATGAGGACTGAGTCTCCAAAATTTAGCAAAGTGGAACGATTACCACCTTTGAATGCAATGTGTTTGGGCAAAATAAAGAATGATTCCCAATCCATAGCAATATGGAGGTCACCAAGGTTACGGAGTGGAGTTGAAGATGTCATGATGAATAAGCATGCATTACGAATTGAACCATCCCTCAAACTACATGAGTTGAACCCAACGCTGCAAGGTCATGACTTAGACAAATTTATCGGTCCAGAGGCACAAATTCCACCAGAATTCATCAGATCTGAAGGTGAATCATCTTCCACTGCAATTATAAATAAAGAATTTCTTAATTGGAAGAGACGAGGCAAATTAATCACTTCATGGCTCCTTGGGTCCATGACTGAAGAAATTTTATCACAGATGCTCGAGTGTGAAACAGCCAACGAAGTCTGGACAATTCTGAATAATTTGTTTTCTTCACGTAATTTAGCTAGAGTTATGGAATTGAAATCAAAACCAGAGAATTTAAAGAAAGGAAGTCTCAATCTTAAGGATTATTTCCTAAAGGTAAAAACTATTGCAGATTCGTTGGCTGCCGCAAGTAAGAAACTCTCAAAGAATGATGATATTATGCATCTTCTTGCTGGTCTTGGAATTGACTTTGATGTTACGGTTTCTGTAATTTCGGCTGGAAAAGAAATTCCAACACTCCAAGAGGTTTATTCACTTCTCTTAGCTCAAGAAGCACGAAATGAGAGGAATAATGCACAAATTAATTCTGATGCATCTGTATCTTCTATTAATGTTACCACCCAAGACCATCAGAAGAGAGGAAATTTTTCGAATTCTGCAGAAACTAGAACCAACTGGAACAATAACGAGGCAGAGGAAATAATCGATCCAATAACAATTGGAATCGAGGTCGAATTTGGAGTATTAACTCTAGAATCCAATGTCAGTTATATTCTTCATACTCGTGCTTCTCTACTTCATTCTACTTCTCCTCAATTGTCTTCCAATACTTTTCTCCTCAAGAATCTTCTTCATGATATCCAATCTGGACAAATACTTCTCATGGGTAAAGTCAATGATGGGATGTACGAATTCTCCTTGACAAAGACCTCTTCCGCCCCTGTCTCTGCTCATATTTCTTATTGTAATAAAGTTGGTATTGCTTTATCGGCTTTTACTTCTCAGAATTCTCATAAATCTACTATTCATTCATTAAATGACAGTTGTAATTTTTCTATTCCTATTGCTTCTGTTTCTTCTGTATTAGACATATGGCATTGGCGTCTTGGCCACCTTACTCTTAATACCGTGCAAAATGTTCCTGATTCATGTAATATTTCCTATTCTCGAAATAAAATACCATTGGAACCTGTGCTCTTGAGCCAGTATGTAGTTCTTCTCCATCGCATTCTTTACCTTCGTGTTCTGCCTCTTTACCTTCCAGTTCTACGTCACTAG

Protein sequence

MRDNKPQRKVVLNEISDETTNTSTIVVDKASTSTRVVDGDSTSRQSHPFQELRVPRHSGPLGLLARQSVNLSCGSIGVSGICPNPMRTESPKFSKVERLPPLNAMCLGKIKNDSQSIAIWRSPRLRSGVEDVMMNKHALRIEPSLKLHELNPTLQGHDLDKFIGPEAQIPPEFIRSEGESSSTAIINKEFLNWKRRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKGSLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQEVYSLLLAQEARNERNNAQINSDASVSSINVTTQDHQKRGNFSNSAETRTNWNNNEAEEIIDPITIGIEVEFGVLTLESNVSYILHTRASLLHSTSPQLSSNTFLLKNLLHDIQSGQILLMGKVNDGMYEFSLTKTSSAPVSAHISYCNKVGIALSAFTSQNSHKSTIHSLNDSCNFSIPIASVSSVLDIWHWRLGHLTLNTVQNVPDSCNISYSRNKIPLEPVLLSQYVVLLHRILYLRVLPLYLPVLRH
Homology
BLAST of Moc01g14610 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])

HSP 1 Score: 209.5 bits (532), Expect = 7.4e-50
Identity = 113/212 (53.30%), Postives = 151/212 (71.23%), Query Frame = 0

Query: 149 ELNPTLQGHDLDKFIGPEAQIPPEFIR-SEGESSSTAI-INKEFLNWKRRGKLITSWLLG 208
           ++   LQG+ L+ +I      P +F++ +E ESSS+++  N  +  W ++ KLI++WLLG
Sbjct: 44  QIRTALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLG 103

Query: 209 SMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKGSLNLKDYFLKVK 268
           SM E+ILSQML+C++A E+WT+L  +F+SR LARVM+LK K EN KKG+L+LKDYFLK+K
Sbjct: 104 SMNEDILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIK 163

Query: 269 TIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQEVYSLLLAQEARN 328
            + DSLA A KKLS  D IMH+LAGLG +FD  +SVI+A     TLQEV SLLL QE RN
Sbjct: 164 NLVDSLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRN 223

Query: 329 ERNNAQINSDASVSSINVTTQDHQKRGNFSNS 359
           ERN   INSD S+ S+N+T  D  K+ N   S
Sbjct: 224 ERN--LINSDGSLPSVNLTLNDSSKKNNLHQS 253

BLAST of Moc01g14610 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 2.6e-47
Identity = 162/453 (35.76%), Postives = 229/453 (50.55%), Query Frame = 0

Query: 129 VEDVMMNKHALRIEPSLKLHELNPTLQGHDLDKFIGPEAQIPPEFIRS-EG-ESSSTAII 188
           +E++M+ +  +  +   +  ++   +QGH L+++I  + + P  FI++ +G  SS+T   
Sbjct: 1   MEELMVEQVEVEADRPEQKFQVLTAIQGHGLEQYIDSDIEPPSRFIQNGDGVTSSTTQQP 60

Query: 189 NKEFLNWKRRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKS 248
           N E+ +W ++ KLI+ WLLGSM+EEILSQML+C    E+WT+L   F+SRNLARVM+LKS
Sbjct: 61  NPEYFHWIKQDKLISLWLLGSMSEEILSQMLDCRMVKEIWTLLECTFASRNLARVMQLKS 120

Query: 249 KPENLKKGSLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAG 308
           K EN+KKGS+NLK+YFLK+K + DSLA A K+L  +D IMH+LA LG +FD  VSVIS  
Sbjct: 121 KLENMKKGSMNLKNYFLKIKNLVDSLATAGKRLPTDDHIMHILARLGPEFDSIVSVISTR 180

Query: 309 KEIPTLQEVYSLLLAQEARNERNNAQINSDASVSSINVTTQDHQKRGNFSNSAE------ 368
           K   ++QE  S        +     Q+ S    SS +   Q +   G F  S        
Sbjct: 181 KSPQSIQEPSS-----NGFSHGFPPQVQSSTGFSSSSTPAQSN--FGVFGGSTPQMQAMM 240

Query: 369 TRTNWNNNEAEEIIDPITIGIEVEFGVLTLES--------------NVSYILHTRASLLH 428
              ++N +         T  +  +FG  +L S              N+S I H  ++LL 
Sbjct: 241 VANDFNRDVTWYPDSGATNHVTNDFGNFSLGSKYHGNGKIQVGNGTNLS-ISHIGSALLQ 300

Query: 429 STSPQLSSN-TFLLKNLLH--------------------------------DIQSGQILL 488
           S S   SS   F L+NLLH                                D+ +GQ+L 
Sbjct: 301 SISASNSSQPVFHLQNLLHVPQIAKNLISLSLFAKDNHVFFEFHPSNYFVKDLTTGQLLF 360

Query: 489 MGKVNDGMYEFSLTKTSS-APVSAHISYCNKVGIALSAFTSQNSHKSTIHSLNDSCNFSI 525
            G V+D +Y+F L K SS  P S   +  N   I  S    Q S+   +H+         
Sbjct: 361 QGTVHDELYQFELRKASSQKPFSVSSTSNNSPTIFNSIL--QYSNSPMLHA--------- 420

BLAST of Moc01g14610 vs. NCBI nr
Match: XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia])

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-41
Identity = 105/190 (55.26%), Postives = 131/190 (68.95%), Query Frame = 0

Query: 195 RRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKG 254
           ++ KLITSWL  SM EEIL +M+ C TA EVW IL NL++SRNLARVM+LKSK EN+KKG
Sbjct: 2   KQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKG 61

Query: 255 SLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQE 314
           +L LKDYF KVK + DSLAAA KK++  D IMH+L GL  +F+ TVSVISA  +  TLQE
Sbjct: 62  NLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQE 121

Query: 315 VYSLLLAQEARNERNNAQINSDASVSSINVTTQ----------DHQK------RGNFSNS 369
           VYSLLL+ E RNERN+  IN+D ++ S+N+T Q          D Q+      R   S +
Sbjct: 122 VYSLLLSHEGRNERNS--INTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGN 181

BLAST of Moc01g14610 vs. NCBI nr
Match: XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia])

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-41
Identity = 105/190 (55.26%), Postives = 131/190 (68.95%), Query Frame = 0

Query: 195 RRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKG 254
           ++ KLITSWL  SM EEIL +M+ C TA EVW IL NL++SRNLARVM+LKSK EN+KKG
Sbjct: 2   KQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKG 61

Query: 255 SLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQE 314
           +L LKDYF KVK + DSLAAA KK++  D IMH+L GL  +F+ TVSVISA  +  TLQE
Sbjct: 62  NLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQE 121

Query: 315 VYSLLLAQEARNERNNAQINSDASVSSINVTTQ----------DHQK------RGNFSNS 369
           VYSLLL+ E RNERN+  IN+D ++ S+N+T Q          D Q+      R   S +
Sbjct: 122 VYSLLLSHEGRNERNS--INTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGN 181

BLAST of Moc01g14610 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 176.8 bits (447), Expect = 5.3e-40
Identity = 95/219 (43.38%), Postives = 151/219 (68.95%), Query Frame = 0

Query: 154 LQGHDLDKFIGPEAQIPPEFIRS--EGESSSTAIINKEFLNWKRRGKLITSWLLGSMTEE 213
           L+ +DL+ F+  E++ P +++ S     +S+T   N  +  WKR+ +LI+SWLLGSM+EE
Sbjct: 50  LEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEE 109

Query: 214 ILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKGSLNLKDYFLKVKTIADS 273
           IL+QML C++A E+W  L  +FSSR LA+ M+ K+K  N+KKGS+ LK+YFLK+    D+
Sbjct: 110 ILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDA 169

Query: 274 LAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQEVYSLLLAQEARNERNNA 333
           LA+ +K +S +D I+++LAGLG D+   +SVISA  + P++QEV SLLL QE++NE   +
Sbjct: 170 LASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE---S 229

Query: 334 QINSDASVSSINVTTQDHQKRGNFSNSAETRTNWNNNEA 371
           ++ S+ ++ S+N+ TQ  +K G  S     + N++NN +
Sbjct: 230 KLISETALPSVNIVTQTTEK-GAESYIRTNQNNYHNNHS 264

BLAST of Moc01g14610 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.6e-50
Identity = 113/212 (53.30%), Postives = 151/212 (71.23%), Query Frame = 0

Query: 149 ELNPTLQGHDLDKFIGPEAQIPPEFIR-SEGESSSTAI-INKEFLNWKRRGKLITSWLLG 208
           ++   LQG+ L+ +I      P +F++ +E ESSS+++  N  +  W ++ KLI++WLLG
Sbjct: 44  QIRTALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLG 103

Query: 209 SMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKGSLNLKDYFLKVK 268
           SM E+ILSQML+C++A E+WT+L  +F+SR LARVM+LK K EN KKG+L+LKDYFLK+K
Sbjct: 104 SMNEDILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIK 163

Query: 269 TIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQEVYSLLLAQEARN 328
            + DSLA A KKLS  D IMH+LAGLG +FD  +SVI+A     TLQEV SLLL QE RN
Sbjct: 164 NLVDSLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRN 223

Query: 329 ERNNAQINSDASVSSINVTTQDHQKRGNFSNS 359
           ERN   INSD S+ S+N+T  D  K+ N   S
Sbjct: 224 ERN--LINSDGSLPSVNLTLNDSSKKNNLHQS 253

BLAST of Moc01g14610 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-47
Identity = 162/453 (35.76%), Postives = 229/453 (50.55%), Query Frame = 0

Query: 129 VEDVMMNKHALRIEPSLKLHELNPTLQGHDLDKFIGPEAQIPPEFIRS-EG-ESSSTAII 188
           +E++M+ +  +  +   +  ++   +QGH L+++I  + + P  FI++ +G  SS+T   
Sbjct: 1   MEELMVEQVEVEADRPEQKFQVLTAIQGHGLEQYIDSDIEPPSRFIQNGDGVTSSTTQQP 60

Query: 189 NKEFLNWKRRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKS 248
           N E+ +W ++ KLI+ WLLGSM+EEILSQML+C    E+WT+L   F+SRNLARVM+LKS
Sbjct: 61  NPEYFHWIKQDKLISLWLLGSMSEEILSQMLDCRMVKEIWTLLECTFASRNLARVMQLKS 120

Query: 249 KPENLKKGSLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAG 308
           K EN+KKGS+NLK+YFLK+K + DSLA A K+L  +D IMH+LA LG +FD  VSVIS  
Sbjct: 121 KLENMKKGSMNLKNYFLKIKNLVDSLATAGKRLPTDDHIMHILARLGPEFDSIVSVISTR 180

Query: 309 KEIPTLQEVYSLLLAQEARNERNNAQINSDASVSSINVTTQDHQKRGNFSNSAE------ 368
           K   ++QE  S        +     Q+ S    SS +   Q +   G F  S        
Sbjct: 181 KSPQSIQEPSS-----NGFSHGFPPQVQSSTGFSSSSTPAQSN--FGVFGGSTPQMQAMM 240

Query: 369 TRTNWNNNEAEEIIDPITIGIEVEFGVLTLES--------------NVSYILHTRASLLH 428
              ++N +         T  +  +FG  +L S              N+S I H  ++LL 
Sbjct: 241 VANDFNRDVTWYPDSGATNHVTNDFGNFSLGSKYHGNGKIQVGNGTNLS-ISHIGSALLQ 300

Query: 429 STSPQLSSN-TFLLKNLLH--------------------------------DIQSGQILL 488
           S S   SS   F L+NLLH                                D+ +GQ+L 
Sbjct: 301 SISASNSSQPVFHLQNLLHVPQIAKNLISLSLFAKDNHVFFEFHPSNYFVKDLTTGQLLF 360

Query: 489 MGKVNDGMYEFSLTKTSS-APVSAHISYCNKVGIALSAFTSQNSHKSTIHSLNDSCNFSI 525
            G V+D +Y+F L K SS  P S   +  N   I  S    Q S+   +H+         
Sbjct: 361 QGTVHDELYQFELRKASSQKPFSVSSTSNNSPTIFNSIL--QYSNSPMLHA--------- 420

BLAST of Moc01g14610 vs. ExPASy TrEMBL
Match: A0A6J1C8R2 (dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.1e-42
Identity = 105/190 (55.26%), Postives = 131/190 (68.95%), Query Frame = 0

Query: 195 RRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKG 254
           ++ KLITSWL  SM EEIL +M+ C TA EVW IL NL++SRNLARVM+LKSK EN+KKG
Sbjct: 2   KQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKG 61

Query: 255 SLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQE 314
           +L LKDYF KVK + DSLAAA KK++  D IMH+L GL  +F+ TVSVISA  +  TLQE
Sbjct: 62  NLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQE 121

Query: 315 VYSLLLAQEARNERNNAQINSDASVSSINVTTQ----------DHQK------RGNFSNS 369
           VYSLLL+ E RNERN+  IN+D ++ S+N+T Q          D Q+      R   S +
Sbjct: 122 VYSLLLSHEGRNERNS--INTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGN 181

BLAST of Moc01g14610 vs. ExPASy TrEMBL
Match: A0A6J1C6N9 (dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.1e-42
Identity = 105/190 (55.26%), Postives = 131/190 (68.95%), Query Frame = 0

Query: 195 RRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKG 254
           ++ KLITSWL  SM EEIL +M+ C TA EVW IL NL++SRNLARVM+LKSK EN+KKG
Sbjct: 2   KQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKG 61

Query: 255 SLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQE 314
           +L LKDYF KVK + DSLAAA KK++  D IMH+L GL  +F+ TVSVISA  +  TLQE
Sbjct: 62  NLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQE 121

Query: 315 VYSLLLAQEARNERNNAQINSDASVSSINVTTQ----------DHQK------RGNFSNS 369
           VYSLLL+ E RNERN+  IN+D ++ S+N+T Q          D Q+      R   S +
Sbjct: 122 VYSLLLSHEGRNERNS--INTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGN 181

BLAST of Moc01g14610 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-40
Identity = 95/219 (43.38%), Postives = 151/219 (68.95%), Query Frame = 0

Query: 154 LQGHDLDKFIGPEAQIPPEFIRS--EGESSSTAIINKEFLNWKRRGKLITSWLLGSMTEE 213
           L+ +DL+ F+  E++ P +++ S     +S+T   N  +  WKR+ +LI+SWLLGSM+EE
Sbjct: 50  LEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSMSEE 109

Query: 214 ILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLKKGSLNLKDYFLKVKTIADS 273
           IL+QML C++A E+W  L  +FSSR LA+ M+ K+K  N+KKGS+ LK+YFLK+    D+
Sbjct: 110 ILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCVDA 169

Query: 274 LAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISAGKEIPTLQEVYSLLLAQEARNERNNA 333
           LA+ +K +S +D I+++LAGLG D+   +SVISA  + P++QEV SLLL QE++NE   +
Sbjct: 170 LASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE---S 229

Query: 334 QINSDASVSSINVTTQDHQKRGNFSNSAETRTNWNNNEA 371
           ++ S+ ++ S+N+ TQ  +K G  S     + N++NN +
Sbjct: 230 KLISETALPSVNIVTQTTEK-GAESYIRTNQNNYHNNHS 264

BLAST of Moc01g14610 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 7.2e-11
Identity = 37/143 (25.87%), Postives = 74/143 (51.75%), Query Frame = 0

Query: 187 NKEFLNWKRRGKLITSWLLGSMT-EEILSQMLECETANEVWTILNNLFSSRNLARVMELK 246
           N   +NW++R  ++   L G++T ++     +   T+ ++W  + N F +   AR + L 
Sbjct: 59  NANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLD 118

Query: 247 SKPENLKKGSLNLKDYFLKVKTIADSLAAASKKLSKNDDIMHLLAGLGIDFDVTVSVISA 306
           S+      G + + DY+ K+K +ADSL      ++  + +M++L GL   FD  ++VI  
Sbjct: 119 SELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKH 178

Query: 307 GKEIPTLQEVYSLLLAQEARNER 329
            +  P+  +  ++L  +E R +R
Sbjct: 179 RQPFPSFDDAATMLQEEEDRLKR 201

BLAST of Moc01g14610 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 1.3e-04
Identity = 19/76 (25.00%), Postives = 46/76 (60.53%), Query Frame = 0

Query: 193 WKRRGKLITSWLLGSMTEEILSQMLECETANEVWTILNNLFSSRNLARVMELKSKPENLK 252
           W++   ++  WL+ SMT+++L  ++  ETA+++W  L  +F      ++ +L+ +   L+
Sbjct: 79  WEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLR 138

Query: 253 KGSLNLKDYFLKVKTI 269
           +G  ++++YF K+  +
Sbjct: 139 QGGDSVEEYFGKLSKV 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154487.17.4e-5053.30uncharacterized protein LOC111021757 [Momordica charantia][more]
XP_022156747.12.6e-4735.76uncharacterized protein LOC111023586 [Momordica charantia][more]
XP_022136882.11.3e-4155.26dr1-associated corepressor homolog isoform X1 [Momordica charantia][more]
XP_022136883.11.3e-4155.26dr1-associated corepressor homolog isoform X2 [Momordica charantia][more]
KAA0048297.15.3e-4043.38Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DLT93.6e-5053.30uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DSS11.3e-4735.76uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1C8R26.1e-4255.26dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1C6N96.1e-4255.26dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=... [more]
A0A5A7U2332.6e-4043.38Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
AT1G34070.17.2e-1125.87CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G21280.11.3e-0425.00CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 193..327
e-value: 1.5E-18
score: 66.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..362
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 147..360
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 147..360

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g14610.1Moc01g14610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding