Moc01g14550 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g14550
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionG-patch domain-containing protein
Locationchr1: 9031856 .. 9034730 (+)
RNA-Seq ExpressionMoc01g14550
SyntenyMoc01g14550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTTCGTGCCACTTGAGGTTTCGTCGTGGGTTACATCGCGTGCCATGTTCCGCCGTGGGTTCCGTCGAGTGTCGCCTGAGATTCCGCCGTGAGTTTTGTCGTATGCCGATGTTCATGAATCGTCTTCTTGTGCCACCGCCTTGTCCATCGAGAATGCAGACGAAAAAGCATGTAGGGCTAGGGTAAGGTAACGATATGGGACTCGGTTTAGTTGGGTCAAACCGACTCGAACCGATATTTATCAAAACTGACCCGACCCGACCCGACACGAATACATTTGGTTCGGATTCTCGGGTCGGTTCGGTTACTTACAACCCTAGTGGTTATGTAAGAGGATATGGACATAGAGTGACAAATCAAAGTTGTTCTATGATTCAAATGATAAAACTATTACATATCTTCAAAAACAATGTGACCGAATGACATCGAAAATGATTGAGTTGAAGTCTTTGGTGTCTTTCCTACTCGCAAGTAAGGTAAAGTTACTTAACATTGTTTATTTTAAATGATTCTTTCAGACTTCATCATTTCTATACTTTGTACATATAGGCCAAGTCAAACGAACAAAATTCCAATCACATTGCAAATGTACCGACATCAGCACATATTCCATCAGCAAACTTAGGTTCTTCACCGGTATGTTTAGCAGTATATTTAAGTTTGTAGTTAATTAGTATTTAAATCTATTACTGTTTGAAATTTTCTTTACTGGTGAAATTAGAGTGTAACCATCAATAATGCCCCACGAAACTGTATGTTGCTCGAATAGATTGGTTCTGGAGAAGTAATTGTTGAAGGAAGATGGTCTTCTAATGATCCATCAGTACTTGTGCATCACATCCCTCTCGATCCAAATATTGTACAAGTGTGGGTTGATACAAGAAAAAAACCAAATTCATATTTATGGAGGCCCACATCTCCGATAGGATGGTTATTGATGATGTTGTTGTTGGGTTTGGTGCCCTTACCTCGTGTATTTGTAATTAATGAACAATTAATTTATTTATTCAATAAAGAGTTATTATTTCTTTGCATTACTCGTATTCTAATAAACTAAGATCCAAGGTTATTTAATATATCTGGAACAGTATATAACTAATATACGATATATTAAATATACAGTGTATATATTTGATACACAAGTGGATAGTGTTTCAGTAATAACTTAAATGATCTATAGTACATGGATAAGATTCGGTACTTTATCCTGGTAACACTATAGATACGACCCGCTTTGTAATAGTTACAAAATGACTCTATACAGGTCGTTCATGTGGAGACATGTGAGTGATGGTATCCTATACAATGAGTTTGTATAAGATCGAACCGCGAAATAATTAATCTTTAGTTATAACACACAAAATAACTAGATTAATATTTCATTGGATAACCAGATAACTTGATCTTAATCCTGAGCGAGTTATGGACTTCGACCTATAAGGGATCGTTTTTTGATTTGTATGGGTGAAAGTGACTCGAGTTGCCGACTCAATCATCCTACCATTTTGGAGACGAGACCGAGTGGGGAGCTGAGAACATAACTACGCAAGATGAAATTCACTCATTCCCGACTTTAGGATAAGTAGATGAGTGTTCCCTTAAATGCTGACTCCAAAACTTGAACAAGGGGCCCCAACCTCTCACTGGCCCGAAAGAGACTTCTGTTTAATGGTCGGATCATAAATATGTTGTTCATTAGAGGAGCAATGATATTTAAGGTGCAAGATGTAACTCAGGTGGGTAAAACGGTAATTTGACCTAGCTGAAGTTACGAACACTCGTGAATGATTGACTTGCCGTTAATGGTCAATTTCCATGGACACAAAATATTCTGCAGAAGAGTGCAGTTGCGGATCTTTAGTGGAATGATTTGCAGTCAACGAATGTTGGTTAATTTGGTTAATGATTTAAATCAATTAACCTCGTATCGTTGGAGCTTCTAATATGTACGTCTATTAGATCTCCTTCGTAGCTCAGAACATGTAAAACGAGGATCAAGATTTTGTTGAAAATAGGGAATGTATATAATGTGTATTGATACATATATAAATATATATATTAATTTTGGGTAAAGATTCGAAATTAATATTATATATTATGAGAGAAATATTTGAATAAAATTCATATAATAATTATGAATTAGATTCATATTAAAACTATAGGTTAAAATTGATGTACGTATGATGTACATTAAATCTATAGGTTATACAACAAATGTGCATTTGAATATGATTAAATATATTGGTTTTAATTAAATATGTGATATTTAATTAAAAGTTAAATAATTAATGGCTAATTATTTATTTAATCAATATTTATACTTAATTAATTAATTATTAATTAGATTAATAATTATTAATTAAATTAATTGATTATTAATAATTAAATTATTAATTATTTATTATTAATTAATTTTATATTTAATTAATTTTATATTTAATTAAAACTCGTCTTGCAAAATTGCAGGGGAGTGGGAAGTGATGATGTGGGGTAACTCCCCACGTCACTCTTCGTTAAACTGGCAGAAACTAATTTTGCCAGTTTGGTTGCTTCACCTACGGAAGAAAGTTATAGAACTCTCAAAATTTCTCTCCAGCTCTCAATCCCTTTTGGTTTCCACCAACCAGATTCTCGCCGGAGTCATAGTAAGGAAGATCGAGTGGAGGTATTGTTTGGGTTAACGTGAAGAAAAGATTCTTCAAAGGTGTTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAATTCGAGCAAGTGCAAGTCATTGAGTTGGCAGAACTAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATTTTCTGA

mRNA sequence

ATGGATTCTTCGTGCCACTTGAGGTTTCGTCGTGGGTTACATCGCGTGCCATGTTCCGCCGTGGGTTCCGTCGAGTGTCGCCTGAGATTCCGCCGTGAGTTTTGTCGTATGCCGATGTTCATGAATCGTCTTCTTGTGCCACCGCCTTGTCCATCGAGAATGCAGACGAAAAAGCATGTAGGGCTAGGGGGAGTGGGAAGTGATGATGTGGGAAAAGATTCTTCAAAGGTGTTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAATTCGAGCAAGTGCAAGTCATTGAGTTGGCAGAACTAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATTTTCTGA

Coding sequence (CDS)

ATGGATTCTTCGTGCCACTTGAGGTTTCGTCGTGGGTTACATCGCGTGCCATGTTCCGCCGTGGGTTCCGTCGAGTGTCGCCTGAGATTCCGCCGTGAGTTTTGTCGTATGCCGATGTTCATGAATCGTCTTCTTGTGCCACCGCCTTGTCCATCGAGAATGCAGACGAAAAAGCATGTAGGGCTAGGGGGAGTGGGAAGTGATGATGTGGGAAAAGATTCTTCAAAGGTGTTGGACCCTATCCCAGTGCGAGAAATTCAGCACGATGAGAACTTGGAATTGGCAGGATTCCAATTCGAGCAAGTGCAAGTCATTGAGTTGGCAGAACTAGTCAAGGAATATTTAGCCCTGCCCGATTTTAGTGACAATGTCTTTGTCAGGGAAATTTTCTGA

Protein sequence

MDSSCHLRFRRGLHRVPCSAVGSVECRLRFRREFCRMPMFMNRLLVPPPCPSRMQTKKHVGLGGVGSDDVGKDSSKVLDPIPVREIQHDENLELAGFQFEQVQVIELAELVKEYLALPDFSDNVFVREIF
Homology
[Close]
BLAST of Moc01g14550 vs. NCBI nr
Match: EEF25156.1 (conserved hypothetical protein, partial [Ricinus communis])

HSP 1 Score: 61.2 bits (147), Expect = 7.5e-06
Identity = 35/60 (58.33%), Postives = 37/60 (61.67%), Query Frame = 0 

Query: 71  GKDSSKVLDPIPVREIQHDENLELAGFQFEQVQVIELAELVKEYLALPDFSDNVFVREIF 130
           G     VLDPI V EIQHDENL             ELAE VKEYL LP+FSDNVFV E+F
Sbjct: 44  GDPEEPVLDPIQVLEIQHDENL-------------ELAETVKEYLPLPNFSDNVFVGEMF 90

[Close]
BLAST of Moc01g14550 vs. ExPASy TrEMBL
Match: B9TG58 (G-patch domain-containing protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM_2070490 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-06
Identity = 35/60 (58.33%), Postives = 37/60 (61.67%), Query Frame = 0 

Query: 71  GKDSSKVLDPIPVREIQHDENLELAGFQFEQVQVIELAELVKEYLALPDFSDNVFVREIF 130
           G     VLDPI V EIQHDENL             ELAE VKEYL LP+FSDNVFV E+F
Sbjct: 44  GDPEEPVLDPIQVLEIQHDENL-------------ELAETVKEYLPLPNFSDNVFVGEMF 90

The following BLAST results are available for this feature:
BLAST of Moc01g14550 vs. NCBI nr
Match NameE-valueIdentityDescription
EEF25156.17.5e-0658.33conserved hypothetical protein, partial [Ricinus communis][more]
BLAST of Moc01g14550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g14550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B9TG583.6e-0658.33G-patch domain-containing protein (Fragment) OS=Ricinus communis OX=3988 GN=RCOM... [more]
BLAST of Moc01g14550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g14550.1Moc01g14550.1mRNA