Moc01g13500 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc01g13500
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr1: 8275261 .. 8275723 (-)
RNA-Seq Expression	Moc01g13500
Synteny	Moc01g13500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGCATTGCTGCTGATATGCCGCACCTCCAGCTCGACCTTGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTCCGGGCCCAACGGCACTCCAGGTCCTACCTCCCTGGTGGACAAGTATGTTAGAGATCTGGACTCTGACTACTCCGACCTGGATGAAGACGAGGCCCTAAGCCAGGAGCCTACTGAGGTCGACACTACCCAAGAGGGAGCTCCTTCTCAGCAGAACAGATCTCAAGAGGTCAACCTTCTGGGTTCTCAAGGCGAGCTATCTTCTCTCACCTCGGGAGCAGCTGAGCTTCCTGTTGTCTTTTATTTTTATTATCTTTTGTAAGTCTTTGGGTGGAGTTGCAAGGTCTATAAGCCTTGGCTCTGTCCTCCAATTAATGAATTCTTCTTTCCTTACATTTGATTGCAATTCTGCATCTAGCTCTGAGATACTTTTGAAGGATTGA

mRNA sequence

ATGAAGGGCATTGCTGCTGATATGCCGCACCTCCAGCTCGACCTTGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTCCGGGCCCAACGGCACTCCAGGTCCTACCTCCCTGGTGGACAAGTATGTTAGAGATCTGGACTCTGACTACTCCGACCTGGATGAAGACGAGGCCCTAAGCCAGGAGCCTACTGAGGTCGACACTACCCAAGAGGGAGCTCCTTCTCAGCAGAACAGATCTCAAGAGGTCAACCTTCTGGGTTCTCAAGGCGAGCTATCTTCTCTCACCTCGGGAGCAGCTGAGCTTCCTGTTGTCTTTTATTTTTATTATCTTTTCTCTGAGATACTTTTGAAGGATTGA

Coding sequence (CDS)

ATGAAGGGCATTGCTGCTGATATGCCGCACCTCCAGCTCGACCTTGGCGATCTGAAGAAGAGGTATGCTGAGAAATGGGCTTCCGGGCCCAACGGCACTCCAGGTCCTACCTCCCTGGTGGACAAGTATGTTAGAGATCTGGACTCTGACTACTCCGACCTGGATGAAGACGAGGCCCTAAGCCAGGAGCCTACTGAGGTCGACACTACCCAAGAGGGAGCTCCTTCTCAGCAGAACAGATCTCAAGAGGTCAACCTTCTGGGTTCTCAAGGCGAGCTATCTTCTCTCACCTCGGGAGCAGCTGAGCTTCCTGTTGTCTTTTATTTTTATTATCTTTTCTCTGAGATACTTTTGAAGGATTGA

Protein sequence

MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEALSQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSSLTSGAAELPVVFYFYYLFSEILLKD

Homology

[Close]

BLAST of Moc01g13500 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 167.9 bits (424), Expect = 5.2e-38
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAAD+PHL++DLGDLKKRYAEKWASGPNGT GP SLVDKYVRDLDSDYSDLDEDE  
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDEDEVP 523

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEPTEV TTQEG PSQQ+ SQEVNLLGSQGELSS
Sbjct: 524 SQEPTEVGTTQEGVPSQQDGSQEVNLLGSQGELSS 558

[Close]

BLAST of Moc01g13500 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33
Identity = 74/95 (77.89%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL +LKK+Y+EKWASGPNGTPGP SLV KYVR+LDSDYSD++E++A 
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEP E+ TTQE  PSQQ+ SQEVNLLGS+GELSS
Sbjct: 276 SQEPNEIGTTQEEVPSQQDGSQEVNLLGSEGELSS 310

[Close]

BLAST of Moc01g13500 vs. NCBI nr
Match: XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-32
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIA DM HLQ+DL D+KK+Y+EKWASGPNGTPGP SLVDKYVR+LDSDYSD++E +A 
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEP EV TTQE  PSQ   SQEVNLLGSQGELSS
Sbjct: 207 SQEPNEVGTTQEEVPSQLGGSQEVNLLGSQGELSS 241

[Close]

BLAST of Moc01g13500 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27
Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL DLKKRY+E WASGPNGTPGP SLVDKYVR+LDSDYSD++E++A 
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEPTEVDTTQEGAPSQ 78
           SQEPT+V TTQE APSQ
Sbjct: 268 SQEPTKVGTTQEEAPSQ 284

[Close]

BLAST of Moc01g13500 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 128.3 bits (321), Expect = 4.6e-26
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL  LKK+Y+EKWASGPNGTP P SLVDKYVR+LDSDYSD++E++A 
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEPTEVDTTQEGAPSQQNRS 82
           SQEP EV TTQE  PSQQ  S
Sbjct: 514 SQEPXEVGTTQEEVPSQQGGS 534

[Close]

BLAST of Moc01g13500 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAAD+PHL++DLGDLKKRYAEKWASGPNGT GP SLVDKYVRDLDSDYSDLDEDE  
Sbjct: 464 MKGIAADVPHLEVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDEDEVP 523

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEPTEV TTQEG PSQQ+ SQEVNLLGSQGELSS
Sbjct: 524 SQEPTEVGTTQEGVPSQQDGSQEVNLLGSQGELSS 558

[Close]

BLAST of Moc01g13500 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 74/95 (77.89%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL +LKK+Y+EKWASGPNGTPGP SLV KYVR+LDSDYSD++E++A 
Sbjct: 216 MKGIAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAP 275

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEP E+ TTQE  PSQQ+ SQEVNLLGS+GELSS
Sbjct: 276 SQEPNEIGTTQEEVPSQQDGSQEVNLLGSEGELSS 310

[Close]

BLAST of Moc01g13500 vs. ExPASy TrEMBL
Match: A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIA DM HLQ+DL D+KK+Y+EKWASGPNGTPGP SLVDKYVR+LDSDYSD++E +A 
Sbjct: 147 MKGIAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAP 206

Query: 61  SQEPTEVDTTQEGAPSQQNRSQEVNLLGSQGELSS 96
           SQEP EV TTQE  PSQ   SQEVNLLGSQGELSS
Sbjct: 207 SQEPNEVGTTQEEVPSQLGGSQEVNLLGSQGELSS 241

[Close]

BLAST of Moc01g13500 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.9e-28
Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL DLKKRY+E WASGPNGTPGP SLVDKYVR+LDSDYSD++E++A 
Sbjct: 208 MKGIAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAP 267

Query: 61  SQEPTEVDTTQEGAPSQ 78
           SQEPT+V TTQE APSQ
Sbjct: 268 SQEPTKVGTTQEEAPSQ 284

[Close]

BLAST of Moc01g13500 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.2e-26
Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 0


Query: 1   MKGIAADMPHLQLDLGDLKKRYAEKWASGPNGTPGPTSLVDKYVRDLDSDYSDLDEDEAL 60
           MKGIAADMPHLQ+DL  LKK+Y+EKWASGPNGTP P SLVDKYVR+LDSDYSD++E++A 
Sbjct: 454 MKGIAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAP 513

Query: 61  SQEPTEVDTTQEGAPSQQNRS 82
           SQEP EV TTQE  PSQQ  S
Sbjct: 514 SQEPXEVGTTQEEVPSQQGGS 534

The following BLAST results are available for this feature:

BLAST of Moc01g13500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142326.1	5.2e-38	88.42	uncharacterized protein LOC111012467 [Momordica charantia]	[more]
XP_022152119.1	3.0e-33	77.89	uncharacterized protein LOC111019909 [Momordica charantia]	[more]
XP_022158409.1	2.5e-32	77.89	uncharacterized protein LOC111024898 [Momordica charantia]	[more]
XP_022147182.1	1.4e-27	81.82	uncharacterized protein LOC111016193 [Momordica charantia]	[more]
XP_022159252.1	4.6e-26	76.54	uncharacterized protein LOC111025665 [Momordica charantia]	[more]

BLAST of Moc01g13500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc01g13500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLV1	2.5e-38	88.42	uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DF31	1.4e-33	77.89	uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DZB5	1.2e-32	77.89	uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1D1N9	6.9e-28	81.82	uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DZB3	2.2e-26	76.54	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc01g13500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc01g13500.1	Moc01g13500.1	mRNA