Moc01g00850 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc01g00850
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr1: 540219 .. 540934 (+)
RNA-Seq ExpressionMoc01g00850
SyntenyMoc01g00850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCATGCCCAGCTCGAACCGCCGAGATTACCACCACTAGCGTTGACAGGTGCTAAGTATGAGGGCCGAGGTGCGACCTGGTCAAGGTCCGATCTACCGGGAAGCTCGGCGGGTCCGATGTGAGCAACTGTCAGCGGCGTGATTATCGGGTGTAACCGTCGGTCCCGAGATTACCGGGTGAAACCGTCGGTCCCGAGATCACCGGGTGTAACCGTCGCGAGATTAACGGGACTACCACCCATAAGCGGAGGACCTCACTCCACGATCAGGTACAATGATTTTTTACCTCGAACTAAACTGGGAATCCGACCTATACTGACTTGATCGTCGGAGTGCTCACCTTTTTGTGCAGGTCCGCACAAGTGTTCAGATCGGTCCGGAGACCAAGTTCGAGCTGCAATCAGAAATACACTGTTGTGCATATCCTTGCATAAACATTTGGCGCCGTCTGTGGGGATAGACAATCTAAGTCATCCCAATTCTTTTAAACAAACACGCGAGCGAAAATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGAACTCTAGCTGCCAGCAACGCCCACCAGAGGGAGGACGGAACCGCGGTGGTCGAGTGGCAAGGTCATGACGGCCTAATAACAGAACCCCTCCGCAGGTCGGCACGAATCACCACGCCTGTTCTACCACCTGCGCACCCAAGGACATCCAAGGCCAACCGTGGCTGA

mRNA sequence

ATGAGTCATGCCCAGCTCGAACCGCCGAGATTACCACCACTAGCGTTGACAGGTGCTAAGTATGAGGGCCGAGGTGCGACCTGGTCAAGATTACCGGGTGAAACCGTCGGTCCCGAGATCACCGGGTGTAACCGTCGCGAGATTAACGGGACTACCACCCATAAGCGGAGGACCTCACTCCACGATCAGGTCCGCACAAGTGTTCAGATCGGTCCGGAGACCAAGTTCGAGCTGCAATCAGAAATACACTATCGAAGAACTCTAGCTGCCAGCAACGCCCACCAGAGGGAGGACGGAACCGCGGTGGTCGAGTGGCAAGGTCATGACGGCCTAATAACAGAACCCCTCCGCAGGTCGGCACGAATCACCACGCCTGTTCTACCACCTGCGCACCCAAGGACATCCAAGGCCAACCGTGGCTGA

Coding sequence (CDS)

ATGAGTCATGCCCAGCTCGAACCGCCGAGATTACCACCACTAGCGTTGACAGGTGCTAAGTATGAGGGCCGAGGTGCGACCTGGTCAAGATTACCGGGTGAAACCGTCGGTCCCGAGATCACCGGGTGTAACCGTCGCGAGATTAACGGGACTACCACCCATAAGCGGAGGACCTCACTCCACGATCAGGTCCGCACAAGTGTTCAGATCGGTCCGGAGACCAAGTTCGAGCTGCAATCAGAAATACACTATCGAAGAACTCTAGCTGCCAGCAACGCCCACCAGAGGGAGGACGGAACCGCGGTGGTCGAGTGGCAAGGTCATGACGGCCTAATAACAGAACCCCTCCGCAGGTCGGCACGAATCACCACGCCTGTTCTACCACCTGCGCACCCAAGGACATCCAAGGCCAACCGTGGCTGA

Protein sequence

MSHAQLEPPRLPPLALTGAKYEGRGATWSRLPGETVGPEITGCNRREINGTTTHKRRTSLHDQVRTSVQIGPETKFELQSEIHYRRTLAASNAHQREDGTAVVEWQGHDGLITEPLRRSARITTPVLPPAHPRTSKANRG
Homology
[Close]
BLAST of Moc01g00850 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-11
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 85  RRTLAASNAHQREDGTAVVEWQGHDGLITEPLRRSARITTPVLPPAHPRTSKA 138
           RR LAA++ HQRE G  VVE QGH+ L TEPL RSARITTPVLPPAHP+ SKA
Sbjct: 13  RRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKPSKA 65

[Close]
BLAST of Moc01g00850 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 3.5e-09
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 85  RRTLAASNAHQREDGTAVVEWQGHDGLITEPLRRSARITTPVLPPAHPRTSKANRG 141
           RR L A++ HQRE G  VVE Q H+GL TEP  RSARITTP L PAHP+  KANRG
Sbjct: 13  RRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

[Close]
BLAST of Moc01g00850 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-11
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 85  RRTLAASNAHQREDGTAVVEWQGHDGLITEPLRRSARITTPVLPPAHPRTSKA 138
           RR LAA++ HQRE G  VVE QGH+ L TEPL RSARITTPVLPPAHP+ SKA
Sbjct: 13  RRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHPKPSKA 65

[Close]
BLAST of Moc01g00850 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.7e-09
Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 85  RRTLAASNAHQREDGTAVVEWQGHDGLITEPLRRSARITTPVLPPAHPRTSKANRG 141
           RR L A++ HQRE G  VVE Q H+GL TEP  RSARITTP L PAHP+  KANRG
Sbjct: 13  RRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHPKPFKANRG 68

The following BLAST results are available for this feature:
BLAST of Moc01g00850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152854.16.4e-1173.58uncharacterized protein LOC111020479 [Momordica charantia][more]
XP_022159327.13.5e-0966.07uncharacterized protein LOC111025738 [Momordica charantia][more]
BLAST of Moc01g00850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc01g00850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DHB33.1e-1173.58uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DZJ11.7e-0966.07uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Moc01g00850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc01g00850.1Moc01g00850.1mRNA