MS028790 (gene) Bitter gourd (TR) v1

Overview


Name	MS028790
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Profilin
Location	scaffold570: 558962 .. 560388 (+)
RNA-Seq Expression	MS028790
Synteny	MS028790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAAGTTTACGTTGATGATCATCTGATGTGCGAAATTGAGGGCAATCACCTCACATCTTCGGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGCCGCTTTCCCTCCGGTTTACTCTCTTGCTTCTCTCTCTTTCTCCGAAAATTTTAAATCCGAGTTCTGATTTGATTGCTGAAATCGATGGCTGGATCTGTCTGATTTTTTAATTCAAGATCTTGTGTTGGAGTACACGACGATGATGGATTTTATCGTGGTTGATTTGATCTGATTGCCAACCATTTCATTTTCTATAAATTTTTTAAGTCTATGCATTACTTATTTCCGTCCGATTTCTTCGACTCAATCGGGAATCTCTATTCTTTTTAAATCGACTTTTTTCATTCTATGCAGTTTTATTAGATGACTGAAATTCGAATCTGTTATTCTTTTTTGTTTATGTCGATTTGATATAGCGACCGAGCACGAGGGGGTGAAGATCTGGCGTTGCCGATTACCGTCATCTAGGCTTCTAGATTTATTTCGAATTTCTTCTCACATATTTTATTAGTTATGAAATGATCAAGATGTTGTACTGAGAGATAAGACCTTCGGTTTGTGAAGAGAAATTAAGTCGTTAGAAAGAATTTGTCAATCTGTTGTTATGTTAACATCTCGTCCGTGTTGGTGATCGATATCACATTATATCTTCAATTGAATTTTTACAAGTCTAGGATGTTGGTCCACCTAACATTCCTGGTTTCCTGTCAACTTCATTACGGTCCTTAATGCATGTTCTTGTTTTTGTTTTGCAGTTCAAGCCTGAAGAAATCAGTGCCATCATGAATGACTTTAGCGAACCGGGAACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATCCAAGGGGAGCCAGGAGCTGTTATTCGTGGGAAGAAGGTGATAAACTCCTATAGTACAATTATAACTTTCTGTTGTGAGTTGTGACTCTGAGAGATGAGCATGCAAACCATATATTTTGTAAATTTTCTAAAAATAACTTTATTAGTTGCGTCTGAATATGATGAGAAATTAATCATATATTAGTCCTCTATTGGTCAGTCATGATAGTCACAATTGTTAAAAGTTTGTAAAATCACTGTGTATTGCATTCTGCAGCATAATCTTTTATAATAACTCTTAGGCGCTGGTGCACTGTTCCATTGTTGGAGATATCTTTGATGTTTAATAAGGCAAATTAATATTCTCCTTTCCATTGTATTTTGAACCATTTAACTCTTGATTTCAGGGCCCAGGTGGGGTCACTGTTAAGAAGACTTCTATGGCTCTAATCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCATCGATCAGGGTCTCTAA

mRNA sequence

ATGTCGTGGCAAGTTTACGTTGATGATCATCTGATGTGCGAAATTGAGGGCAATCACCTCACATCTTCGGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGCCGCTTTCCCTCCGGTTTACTCTCTTGCTTCTCTCTCTTTCTCCGAAAATTTTAAATCCGACGACCGAGCACGAGGGGGTGAAGATCTGGCGTTGCCGATTACCTTCAAGCCTGAAGAAATCAGTGCCATCATGAATGACTTTAGCGAACCGGGAACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATCCAAGGGGAGCCAGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTCACTGTTAAGAAGACTTCTATGGCTCTAATCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCATCGATCAGGGTCTCTAA

Coding sequence (CDS)

ATGTCGTGGCAAGTTTACGTTGATGATCATCTGATGTGCGAAATTGAGGGCAATCACCTCACATCTTCGGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGCCGCTTTCCCTCCGGTTTACTCTCTTGCTTCTCTCTCTTTCTCCGAAAATTTTAAATCCGACGACCGAGCACGAGGGGGTGAAGATCTGGCGTTGCCGATTACCTTCAAGCCTGAAGAAATCAGTGCCATCATGAATGACTTTAGCGAACCGGGAACGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCAAAATATATGGTAATCCAAGGGGAGCCAGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTCACTGTTAAGAAGACTTCTATGGCTCTAATCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCATCGATCAGGGTCTCTAA

Protein sequence

MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRARGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL

Homology

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BLAST of MS028790 vs. NCBI nr
Match: XP_022154695.1 (profilin-1 [Momordica charantia])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 131/161 (81.37%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPP                   
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPP------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG
Sbjct: 61  -----------FKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL
Sbjct: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131

[Close]

BLAST of MS028790 vs. NCBI nr
Match: XP_022999543.1 (profilin-1 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 119/161 (73.91%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHLTS+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFNEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQGL
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL 131

[Close]

BLAST of MS028790 vs. NCBI nr
Match: XP_022946037.1 (profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 119/161 (73.91%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDFSEPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQGL
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL 131

[Close]

BLAST of MS028790 vs. NCBI nr
Match: XP_023546560.1 (profilin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 2.9e-60
Identity = 118/161 (73.29%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFNEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQGL
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL 131

[Close]

BLAST of MS028790 vs. NCBI nr
Match: KAG7030463.1 (Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.9 bits (616), Expect = 3.8e-60
Identity = 118/160 (73.75%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDFSEPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 161
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQG
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQG 130

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BLAST of MS028790 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-61
Identity = 118/161 (73.29%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMCEIEGNHLTS+AIIG DGSVWAQS+ FP                    
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPG+LAPTGLYL G KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------QFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL
Sbjct: 121 GVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131

[Close]

BLAST of MS028790 vs. ExPASy Swiss-Prot
Match: P49231 (Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-60
Identity = 112/161 (69.57%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHL+CEIEGNHLT +AI+G DGSVWA+SA+FP                    
Sbjct: 1   MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+ IMNDF+EPGTLAPTGLY+GG KYMVIQGEPG+VIRGKKGPG
Sbjct: 61  ----------QFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGSVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT++AL+IGIYDEPMTPGQCNMIVERLGDYLI+QGL
Sbjct: 121 GVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIEQGL 131

[Close]

BLAST of MS028790 vs. ExPASy Swiss-Prot
Match: Q8GT39 (Profilin OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-60
Identity = 111/161 (68.94%), Postives = 126/161 (78.26%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMCEIEGNHL+++AIIGHDGSVWAQSA FP +                  
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQL------------------ 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                       KPEE++ I+NDF+EPG+LAPTGLYLGG KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ------------KPEEVTGILNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKK+++AL+IGIYDEPMTPGQCNMIVERLGDYL++QGL
Sbjct: 121 GVTVKKSTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131

[Close]

BLAST of MS028790 vs. ExPASy Swiss-Prot
Match: Q64LH2 (Profilin-2 OS=Ambrosia artemisiifolia OX=4212 GN=A0418 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.0e-60
Identity = 113/160 (70.62%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMCEIEGNHL+++AIIGHDG VWAQSA FP V                  
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQV------------------ 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                       KPEEI+ IMNDF+EPG+LAPTGLYLGG KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ------------KPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 161
           GVT+KKT+MALIIGIYDEPM PGQCNMIVERLGDYL++QG
Sbjct: 121 GVTIKKTTMALIIGIYDEPMAPGQCNMIVERLGDYLLEQG 130

[Close]

BLAST of MS028790 vs. ExPASy Swiss-Prot
Match: Q93YI9 (Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.2e-60
Identity = 116/161 (72.05%), Postives = 122/161 (75.78%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMCEIEGN LTS+AIIG DGSVWAQSA FP                    
Sbjct: 1   MSWQTYVDDHLMCEIEGNRLTSAAIIGQDGSVWAQSATFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPGTLAPTGLYLGG KYMVIQGE GAVIRGKKGPG
Sbjct: 61  ----------QFKPEEITAIMNDFAEPGTLAPTGLYLGGTKYMVIQGEAGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           G+TVKKT+ ALIIGIYDEPMTPGQCNMIVERLGDYLI+Q L
Sbjct: 121 GITVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIEQSL 131

[Close]

BLAST of MS028790 vs. ExPASy TrEMBL
Match: A0A6J1DKC9 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.6e-66
Identity = 131/161 (81.37%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPP                   
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPP------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG
Sbjct: 61  -----------FKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL
Sbjct: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131

[Close]

BLAST of MS028790 vs. ExPASy TrEMBL
Match: A0A6J1KK00 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.9e-61
Identity = 119/161 (73.91%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHLTS+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFNEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQGL
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL 131

[Close]

BLAST of MS028790 vs. ExPASy TrEMBL
Match: A0A6J1G2P2 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 119/161 (73.91%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP                    
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDFSEPGTLAPTGLYLGG+KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------KFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT +AL+IGIYDEPMTPGQCNMIVERLGDYL+DQGL
Sbjct: 121 GVTVKKTGLALVIGIYDEPMTPGQCNMIVERLGDYLVDQGL 131

[Close]

BLAST of MS028790 vs. ExPASy TrEMBL
Match: A0A6J1HSG7 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 120/161 (74.53%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSW VYVDDHLMC+IEGNHLTS+AIIGHDGSVWAQS +FP                    
Sbjct: 1   MSWNVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSDSFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+AIMNDF+EPG LAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------QFKPEEITAIMNDFNEPGVLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKTS+ALIIGIYDEPMTPGQCNMIVERLGDYLI+QGL
Sbjct: 121 GVTVKKTSLALIIGIYDEPMTPGQCNMIVERLGDYLIEQGL 131

[Close]

BLAST of MS028790 vs. ExPASy TrEMBL
Match: A0A4D6LA23 (Profilin OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g5585 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.2e-60
Identity = 117/161 (72.67%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQVYVDDHL+CEIEGNHLT +AIIGHDGSVWAQS++FP                    
Sbjct: 1   MSWQVYVDDHLLCEIEGNHLTHAAIIGHDGSVWAQSSSFP-------------------- 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                      FKPEEI+ IMNDF+EPGTLAPTGLY+GG KYMVIQGEPGAVIRGKKGPG
Sbjct: 61  ----------QFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVTVKKT++AL+IGIYDEPMTPGQCNMIVERLGDYLIDQGL
Sbjct: 121 GVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131

[Close]

BLAST of MS028790 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 204.9 bits (520), Expect = 4.8e-53
Identity = 100/161 (62.11%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMCE+EGNHLT +AI G DGSVWAQS+AFP +                  
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQL------------------ 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                       KP EI+ I  DF E G LAPTGL+LGG KYMV+QGE GAVIRGKKGPG
Sbjct: 61  ------------KPAEIAGINKDFEEAGHLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVT+KKT+ AL+ GIYDEPMT GQCN++VERLGDYLI+ GL
Sbjct: 121 GVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESGL 131

[Close]

BLAST of MS028790 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 204.5 bits (519), Expect = 6.3e-53
Identity = 99/161 (61.49%), Postives = 113/161 (70.19%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMC++EGNHLT++AI+G DGSVWAQSA FP +                  
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQL------------------ 60

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                       KP+EI  I  DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKGPG
Sbjct: 61  ------------KPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPG 120

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVT+KKT+ AL+ G YDEPMT GQCN++VERLGDYLI+  L
Sbjct: 121 GVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131

[Close]

BLAST of MS028790 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 204.5 bits (519), Expect = 6.3e-53
Identity = 99/161 (61.49%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSDDRA 60
           MSWQ YVDDHLMC++ GN LT++AI+G DGSVWAQS  FP V                  
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQV------------------ 97

Query: 61  RGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPG 120
                       KPEEI  I +DF+ PGTLAPTGL+LGG KYMVIQGEP AVIRGKKG G
Sbjct: 98  ------------KPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAG 157

Query: 121 GVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           GVT+KKT++AL+ GIYDEPMTPGQCNM+VE LG+YLI+ GL
Sbjct: 158 GVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 168

[Close]

BLAST of MS028790 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 201.8 bits (512), Expect = 4.1e-52
Identity = 96/164 (58.54%), Postives = 117/164 (71.34%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEI---EGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSD 60
           MSWQ YVD+HLMC++   +G+HLT++AIIGHDGSVWAQSA FP                 
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFP----------------- 60

Query: 61  DRARGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKK 120
                         FKP+EI+ IM DF EPG LAPTG++L G KYMVIQGEP AVIRGKK
Sbjct: 61  -------------QFKPQEITDIMKDFDEPGHLAPTGMFLAGLKYMVIQGEPNAVIRGKK 120

Query: 121 GPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           G GG+T+KKT  +++ G+Y+EP+TPGQCNM+VERLGDYLI+QGL
Sbjct: 121 GAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQGL 134

[Close]

BLAST of MS028790 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 200.7 bits (509), Expect = 9.1e-52
Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCEI---EGNHLTSSAIIGHDGSVWAQSAAFPPVYSLASLSFSENFKSD 60
           MSWQ YVD+HLMC++   +G+HLT++AI+GHDGSVWAQSA FP                 
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFP----------------- 60

Query: 61  DRARGGEDLALPITFKPEEISAIMNDFSEPGTLAPTGLYLGGAKYMVIQGEPGAVIRGKK 120
                         FK +E S IM DF EPG LAPTGL++ GAKYMVIQGEPGAVIRGKK
Sbjct: 61  -------------QFKGQEFSDIMKDFDEPGHLAPTGLFMAGAKYMVIQGEPGAVIRGKK 120

Query: 121 GPGGVTVKKTSMALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 162
           G GG+T+KKT  + + GIY+EP+TPGQCNM+VERLGDYL++QGL
Sbjct: 121 GAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQGL 134

The following BLAST results are available for this feature:

BLAST of MS028790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154695.1	1.8e-65	81.37	profilin-1 [Momordica charantia]	[more]
XP_022999543.1	1.0e-60	73.91	profilin-1 [Cucurbita maxima]	[more]
XP_022946037.1	1.3e-60	73.91	profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata]	[more]
XP_023546560.1	2.9e-60	73.29	profilin-1 [Cucurbita pepo subsp. pepo]	[more]
KAG7030463.1	3.8e-60	73.75	Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS028790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82572	1.2e-61	73.29	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
P49231	3.0e-60	69.57	Profilin-1 OS=Phaseolus vulgaris OX=3885 PE=1 SV=1	[more]
Q8GT39	3.0e-60	68.94	Profilin OS=Prunus persica OX=3760 PE=1 SV=1	[more]
Q64LH2	4.0e-60	70.63	Profilin-2 OS=Ambrosia artemisiifolia OX=4212 GN=A0418 PE=1 SV=1	[more]
Q93YI9	5.2e-60	72.05	Profilin OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]

BLAST of MS028790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKC9	8.6e-66	81.37	Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1	[more]
A0A6J1KK00	4.9e-61	73.91	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1	[more]
A0A6J1G2P2	6.4e-61	73.91	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1	[more]
A0A6J1HSG7	1.8e-60	74.53	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1	[more]
A0A4D6LA23	3.2e-60	72.67	Profilin OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g5585 PE=3 SV=1	[more]

BLAST of MS028790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29350.1	4.8e-53	62.11	profilin 2	[more]
AT2G19760.1	6.3e-53	61.49	profilin 1	[more]
AT5G56600.1	6.3e-53	61.49	profilin 3	[more]
AT2G19770.1	4.1e-52	58.54	profilin 5	[more]
AT4G29340.1	9.1e-52	58.54	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 1..14 score: 83.9 coord: 27..40 score: 83.64
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 143..160 score: 70.56 coord: 3..12 score: 72.0
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..161 e-value: 1.6E-44 score: 163.9
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..160 e-value: 8.2E-39 score: 132.7
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 72..160 coord: 1..43
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..160 e-value: 6.59883E-51 score: 157.102
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..161 e-value: 1.1E-51 score: 176.3
None	No IPR available	PANTHER	PTHR11604:SF47	PROFILIN	coord: 72..160
None	No IPR available	PANTHER	PTHR11604:SF47	PROFILIN	coord: 1..43
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028790.1	MS028790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003779	actin binding