MS028784 (gene) Bitter gourd (TR) v1

BLAST of MS028784 vs. NCBI nr
Match: KAF7841267.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 87.8 bits (216), Expect = 8.9e-14
Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0

Query: 72  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSV 131
           AA  EI+K NG NDF LWR ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS 
Sbjct: 235 AAKFEIEKFNGNNDFSLWRVKMRALLVQQGLLKALEGKEALPTELSNQEKDDLLERALST 294

Query: 132 TQLSLADEILIEVVDETCPAKLWI 156
             LSLAD++L EVVDE   A LW+
Sbjct: 295 ILLSLADDVLREVVDEKSAAGLWL 318

BLAST of MS028784 vs. NCBI nr
Match: EOY22705.1 (Transducin/WD40 repeat-like superfamily protein [Theobroma cacao])

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 56  RTWIRIHHNLTGFLMDAAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDG 115
           R+W+ ++         +   EI+K NGRNDF LWR ++RAL   QGLL+ L+GKE L   
Sbjct: 114 RSWVNLN---LAMATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSN 173

Query: 116 LSDREKQPLMSNALSVTQLSLADEILIEVVDETCPAKLW 155
           LSD EK  LM  A SV  L+L+DE+L EV DE   A +W
Sbjct: 174 LSDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVW 209

BLAST of MS028784 vs. NCBI nr
Match: KAF7817786.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 72  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSV 131
           AA  EI+K NG NDF LWR ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS 
Sbjct: 2   AAKFEIEKFNGNNDFSLWRVKMRALLVQQGLLKALEGKEALPTELSNQEKDDLLERALST 61

Query: 132 TQLSLADEILIEVVDETCPAKLWI 156
             LSLAD++L EV DE   A LW+
Sbjct: 62  ILLSLADDVLREVADEKSAAGLWL 85

BLAST of MS028784 vs. NCBI nr
Match: KAF7811757.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-13
Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 0

Query: 72  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSV 131
           AA  EI+K N  NDF LWR ++RAL   QGLL+ L GKE LS  LS++EK  L+  ALS 
Sbjct: 12  AAKFEIEKFNDNNDFSLWRVKMRALLVQQGLLKALEGKEALSTELSNQEKDDLLERALST 71

Query: 132 TQLSLADEILIEVVDETCPAKLWI 156
             LSLAD++L EV DE   A LW+
Sbjct: 72  ILLSLADDVLREVADEKSAAGLWL 95

BLAST of MS028784 vs. NCBI nr
Match: KAF7829260.1 (putative rhamnogalacturonate lyase B isoform X3 [Senna tora])

HSP 1 Score: 84.3 bits (207), Expect = 9.8e-13
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 0

Query: 72  AAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSV 131
           AA  EI+K NG NDF LW  ++RAL   QGLL+ L GKE L   LS++EK  L+  ALS 
Sbjct: 12  AAKFEIEKFNGNNDFSLWHVKMRALLVQQGLLKALEGKEALPTELSNQEKDDLLERALST 71

Query: 132 TQLSLADEILIEVVDETCPAKLWI 156
             LSLAD++L EV DE   A LW+
Sbjct: 72  ILLSLADDVLREVADEKSAAGLWL 95

BLAST of MS028784 vs. ExPASy TrEMBL
Match: A0A061FYY2 (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_014797 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.3e-14
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0

Query: 56  RTWIRIHHNLTGFLMDAAMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDG 115
           R+W+ ++         +   EI+K NGRNDF LWR ++RAL   QGLL+ L+GKE L   
Sbjct: 114 RSWVNLN---LAMATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSN 173

Query: 116 LSDREKQPLMSNALSVTQLSLADEILIEVVDETCPAKLW 155
           LSD EK  LM  A SV  L+L+DE+L EV DE   A +W
Sbjct: 174 LSDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVW 209

BLAST of MS028784 vs. ExPASy TrEMBL
Match: A0A2N9JAK8 (gag_pre-integrs domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61353 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.8e-13
Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 0

Query: 73  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVT 132
           A +EI+K NG+NDF LW  ++R L   QGLL  L+GK+ L   LS+ EK+ L+  A S  
Sbjct: 9   AKNEIEKFNGKNDFSLWHVKMRVLLVQQGLLRALKGKDSLLAQLSEEEKEDLLERAHSAI 68

Query: 133 QLSLADEILIEVVDETCPAKLWI 156
           QLSLADE+L EVV+E   A+LW+
Sbjct: 69  QLSLADEVLSEVVEEKIAARLWL 91

BLAST of MS028784 vs. ExPASy TrEMBL
Match: A0A061EWE5 (CCHC-type domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_024518 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-12
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0

Query: 76  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLS 135
           EI+K NGRNDF LWR ++ AL   QGLL+ L+GKE L   LSD EK  LM  A S   L+
Sbjct: 9   EIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAILLT 68

Query: 136 LADEILIEVVDETCPAKLW 155
           L+DE+L EV DE   A +W
Sbjct: 69  LSDEVLREVTDEESAAAMW 87

BLAST of MS028784 vs. ExPASy TrEMBL
Match: A0A2N9EX70 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7314 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 0

Query: 73  AMSEIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVT 132
           A  EI+K NG+NDF LWR ++R L   QGLL  L+GK+ L   LS+ EK+ L+  A S  
Sbjct: 9   AKYEIEKFNGKNDFSLWRVKMRTLLVQQGLLRALKGKDSLPTQLSEEEKEDLLERAHSAI 68

Query: 133 QLSLADEILIEVVDE 148
           QLSLADE+L EVV+E
Sbjct: 69  QLSLADEVLREVVEE 83

BLAST of MS028784 vs. ExPASy TrEMBL
Match: A0A5N6MMT4 (Integrase catalytic domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_30784 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 0

Query: 76  EIKKLNGRNDFRLWREEVRALSDSQGLLETLRGKEVLSDGLSDREKQPLMSNALSVTQLS 135
           +I+K NG+NDF LWR ++RAL   QGL++ L+G+  L  GLSD EK+ LM  A S   LS
Sbjct: 8   DIEKFNGKNDFSLWRLKMRALLVHQGLVDALKGEVGLPVGLSDSEKKQLMEKAHSAIILS 67

Query: 136 LADEILIEVVDETCPAKLW 155
           L D +L EV  ET  A +W
Sbjct: 68  LGDRVLREVSKETTAASVW 86