MS028760 (gene) Bitter gourd (TR) v1

Overview


Name	MS028760
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ribosomal RNA processing protein 36 homolog
Location	scaffold155: 591918 .. 605326 (+)
RNA-Seq Expression	MS028760
Synteny	MS028760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGTTGGAGCTTCCTCCAACTTGGACCCTGGTCGAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCACTTAGGCCCACTTCAAATGGTTTTAACCCATTTGGAAATATGAAATTCTCGTATAGTATATGGCCAGTAATGCTCATTTCCTATAATTTGCCCCCTTGGAAGTGTATGAAAGAACCATCCATTTTTTTTTATCTCTACTCATTCCTGGGCCAAGATCTCCTGGTAAAGAGATTGATATTTACCTACAACCTTTGATAGATGAGTTGAATGAGTTGTGGGTGAATGGTGTCCCCATGTACGATAATTTCAGTGTCTCTTTCTTCCAACTTCATGCTACCTTATTATGGAAGATTAACAATTTTCCAACTTATGGTGATTTGTCTGGTTGGAGGACAAAAAGTTATAAGGCTTGTCCAGTTTGCAATGACGATACAAGTTCAATGAGATTAAAGAGCAAAATTTATTTCATGTGACATCGTCGATATCTACCTCAAACACATACATGGTGTAAGAGTAGGCAACATGATGGAAAACAAGAATTTAGAACAGCTCCAAAGATATTATCTAGAAATGATATTAGAAATCAATTGAATTCATTGAGTTTCCCTACGTTGAGCAAGCATCCTACAATAGTACATGATAACAAATATACGTGGATAATTAACAAGCACAATTGGAGTAAAAGAAGTATTTTCTTAGATCTTCCGTATTGACAAAATCTTAAGTTAGGTCATATACTTGACGTGATGCATATTGAGAAAAACATATGTGATAATTTGGTTGGTACTATATTAAATATTGATGGGAAAACTAAAAACACTATTAAAGTCCGTGAACACTTAGCAAACTTGAAAATAAGAAAGGAACTTCATATACAGGAAATTGGAGGCTGGCGTGTAAAGCCTCATGCATCGTTCACATTAACTACAAGTGAAAAGGTTAGTTTTTGTACATTCTTAAAATCCTTGAAGTTTCCAAATGAATTTGCTTCAAATATATCTCGGTGTGTCAACGCAAATGAGGACAATATCACAAATCTGAAAAATCATGATTGTCACGTTTTGTTGCAAAAGCTTCTTCCAATTGGTATTCGACCATATATTTTTAAAAAGTTTGTTAAAATGTTTGGACAACGTATGGAATGATGTCACCTCAAAAAAAATATATTGGATGGGATTGGATGAGCATGTCAATTGTATAAATGTGCGTTAATAACACAATAATTTAATGATTTATTAGTTTTCTTCCCTATGGATAACCTAATTAAGAATTTCTAATACATCAAAAAATTAAATTAAATTTGTTGCACGGGATGAGATGAAGGCTGAACTGGCTGCCTCATTTGAACATTGAAATGATAAATGTATTTTTTAAACCAATGGCAAAACTTCAATAATATTTTTGTTTTGTAATTTAACCTCTAACACTTTATAGGTGATAGGTTATAGAATTTTTACAATTATCCCATCTCTCTAGTTCTCTCATAAAACTAAAGGTAGCCATTAATGGTTGAACAAAAAATTCAATAACCAGAAGAGTTAGATAACCCAACCCAAACGGTAAGGTTTAGCTAGGTTAGATTGCTCCATATGGGCTAAGTTTGATTTTTAAGAACCAACCAGTTCGGTTCGATTTGTTCGTTCAAGAAAAAAAAATTATTAACTGGAATTGAACTGGGTTTTACACACACGTATATATGTGTACATGTGATAAGATGAAAAACACACTCATATTTTATATATTTATTTTACATTTTATTAATTTATGATATTTAAATATTTGAATTTAATATAATTTATCATTTTGGGGCAAATTGAATATATTCAAGAATAATAATTTAAAAACACAATTTTAGAGAATAATGCGGACTTCACCTTGAGCCTTCATCATCTCTTCATTAGTCTCTCTCACAGTCTTTCACGGTCTCATTGTCGTCCGTTCATTTATCTATCGTTGCTGCCAGCCGCTCCTCACCGTCGATACCATTCAGCCTTCATCGCCCATCATCCGCTACGTTCAGCCACACAAGGTATTTCTCTCATTCTCTATTCTCTCAAATTTTGCAACCCAATTCCAAAAAAAAAAAAAAAACAAAATTTGCAATCTACTAATTGCCCACTATAATTCGATTCGGTTCTATCTGGTAGAAAAACCCATTTGGGTTGGCCTAAAAAAAACTCCCTAATGCGCTCTGTTGGGAGTTTTGATTGATTTTTTTAATAAACTAGAAGTTGAATAAGCATTTATGAATTTAGGGCAAATAGTTTTTAATTTCAGCATAGAAATGAAGAAGTGAAGCAGTTTGGGTCCTAGCTCGAGCAAAGAAGTGATGGAAGACAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGTATCTTTTGTTAAGTGTATCTCAACAGCTTCTCAATAGTATATCCCTCAAATCATGTAACCTTTACCTGTATATCCCAAGATCATGTAAAACAATTGTATTCCCTGTACTGTATATACTCCTAAGATGAATGAACAAATCATGGGCATTTATTCATTTCTTAAACCTTCTCATGGTATCAGAGCTTTCGACATACGTCTTCTTCTTTTGATCTTGATAACACAGTCGCTGTGTCGACCCTATTCCAAACTTGCCCAATTTTATTAAAAAAAATTTTCTCGCTTCCAAATTTCAGTTTTAATTACCCCACCCAAAATTTCATTACCTTCACCCAAATTTCACTCATTTCCATTCTTGGCCCCATTCCCACACCATCTTTTACTAAATTCCCACGTCAATTTTTTTCCCCTTTCCCACATACACTTTGGCCTGACCCCACCTTCTATTTTATTTTATTTTCTTTCTCCTTCAGTTCTTAATTACCTCATTCCCTTTCCCACACAGCAAACTACACAATGACCGATACAAATACTCCTTCCAAATCCCACACCAAAATCGACCAATTTCCCACATCTTTCACCTTTGATCGTCAATTCTCTCCTTCATCGCGCTTCCTACTCTCAAATATTTGTACTCTTGTTTCTGTCTGGCTTGACTCCAGCAACTATACTCTTTGGCGTTATCAACTCGACTCCATCTTAAAGGCACACAATCTCTTTGGTTTCATCTTTGAGCAATTGAAATTATATTTATGTTACATTTTTTATTATTGAAATTCATGAATTATTTTATTTGAAATTTGAAGTTCACTCCATTTATATAGGAAGAAGAGAATATAGAGCGTGAACTTGCAGATATAACTTTTGAAGAGTTGCAGAGAGTGCAGTCTGATGGGTCACATTTGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGTAGCTTATGGGTACTATTTTTCCCCTTATTTTAATTTTGCAAGTTAATTGAGTATATGATTTGTAATTTCTTTGTGAAGGCCAATGGAGGTTAGTAGTAAGAAACTAGTTAGTAGATTGAGAAAAGCCAATCAGGCTCCTAAGAATGTGAGTTGGTTATTCCTTTTTGTTAGTTTATTGTCAAAATTTCTTGGATTTACCTATATGGAGTTTAAAGCTAGTGAATGATAATGAGAGTAACATCTCACTTTATAGAGCTCGAATGCGACTTGAGATAATAGTTGCATTTCTCATTGATAATTTGTTGTGTTTCAGGTGGTACAAGATCCATGTTTCGAATCTTTATCTGGCACTTTCGATGTTGAGGGGTGAGTTTTTCTTTATTCGAGGTTTGATTAACTCTTTGACATGTTGTAGAATACTTTTATCTAGATGGATATGCTCGCCAATGGTGCTCGAATACATGGGCTATTGCTGGGTATGTCGCGGGTGCACCATTGTCGACTTGCTACATGGGGATCGCGCCGCAAACAATTTATCAAATCGACGCTGACGAATGTTGTACACTAATTGTGCTACCAATTCTTATATGCGCAAGTGTACACAATCGTCGCAGCAAGTAATAAAAGTTTGAATCCACAGAGACTAAATGCTTAAATACTCGATACTCACTCAAAGAAGCGATGCAATAAGCCAAGGGGGTTTTCCTCCTCTAATAACTAAAATATATTGAGGTAAAAACTATTTAAAATGATTATCTTAAATCAAACTCAAGTGTAAATTTCGCTAGTGTTACCACACATCTACAATCACTCAATAAAATCGTATAAAAATTAGGGCGTAAGGGGGAGAGGAAGTCGACTCTTCTAGGCCACCCTAACTATGCTGTAGCATTAGTTGAGTAATTGCAGTGGTCAAACACACCCTAGATTTTCTACTACTAACATTTATAGACAAACGTCAATAGCATATACACACAATTTTTATAACCAAGTTAGGTGATGTTTATCCCTAAGTTAACACACGCTAAACTCAATTAGACTCTAGCCCAAGATGAAGAGTTTCGCTCCTTAATACATTTTCCCAAACATTATCAAAGAGATATTTCAAAATGGTGATCAAGCAAATTGAAAATAGAGTGATAAAACAACTTCAACTTAAAGCAAACTTTCATTAAAGCAGACAGGTTACAGCCCATAAACTAAGTCTAGAACATCTCCCCCTTACACAAGTTGGTTAGCTATGAAAAGCCATAAGGAGAGTCAACGGTTTGGAGAGGTTTTCTTGGAGTGAGAGTGGATTCCTTCAAGAATGAACAAGGGGAATTTTTCTTGATGTTTGTGTGTGTCTCTGAGGCTTCTCCTCTTGTTTGCATTTATACCCCCTTCTGATATTAGGGCAACAACACGAGCCTTGAGGAACCCAGCTCTCACTTTTGGGTAAAATCTCCAATTACCGTGGTAAATTCCGCTGAGAAGACCGTTCACTGTTAGCTTGCTGCTTTTTGTCTTTTGTCTTTATCTGGAACCGATGTTGTAGCATCATTGAAGCTGCAGCAAAAATGCTCAGAATGAGATCATTTAATTTAGTGCTAACATTGAACTCTTAGTAACGTGAAACATTGATTTATCTTTTAAATTCAAGCACACTCACTAAATAATTGGGGCTAGAATAGGCTATTTTTAGCTATTTCATGCAACTTATAAGCACAATTAACTCTCTTTAGGAGAGTTATCAGCGAACTGCTGGGTGCTGCAACCTCGTGTCACCACGAACTGCCACAAATCGACGTCGAAGGAACACGTCACGTCGTCGCAGTGGTAGGCTTTTGAAACGCTATGGTTGCCGCTGCTGTTGAAGCCAAAATCGTGAGTCGCCACCTTCAAATACCGCCATCGCTAGTGGTCTAGCCGGATCTGTCGTGGTCTCGCTGGAAGGTGTGTTGGGAGCCGCCAGAAAACAGAAAGAGAAGAGGCGTGGGGGTTGAGGGCAATAAGAGGGCGAGAAGGAAAAATAAGAGTTAGGACGGGAAGGTATTAGCACCCTACAACACCCGTTAAAACGGTTACCAGTATTTTATTTGTTATTATCCTATTTATTAAATTATTAAAGGTCCACAAAAGTTTATTTTATTTTATTTGTAAACGTCTCATGTTTATTAATCCACATTTTAGCAATAAAACATGGGTTAATAATTATGGGTGGCATAAATACCATTGAAAATATGAGAGAAAAATATCTTTGGTGAAATTTCATGTATTTAAGGAATTTAACAAATTTCAAAAAGAGAACACTACTCAATCTCATTTGTTTATTTTGTGAAAATTTGTCTGTGGCTTTTGAAATTCGTTTTGATTGTTTTATGAAAAATTATTCCAATTCATTTTAATGATAAATTCATGTATTTATGGAATTTATAAAATCCATAAATAGAACACTACTTCTTCCAAAATTATGGAAATTGATATTTTTGTTTGCACGAGAATTTTCATGCATTTATGAATGTTAAGAAAATCCATAAAAAGAACACTACTAATTCTCAAGTTTGATTTTTATATCGTGTAAACAATTTTTTTTTTTTTTGGAATTTTATAAAATTAATTTTGATAAGGAATTTCATGTATTTATTGGATTTTAACAAAAATCCGTAAAGAGAACACTACTCAACCTCGAAAATTAAATATTTATTTTCTTAAATTTATTTTGAAATTTTAGAAAAAATTTACTTGATTTCCTATTTTTATTTTGCTTAGACACATGGAATTTCCGGTGAAGGTAAGAAATATAAAAATATGTAAATACAACTCTAAATTGCATAATATCATAATTTTAAATCCTACAAAATAATAAATAGTTTGAAAATAAATTAGATCTTCCATGTCGTCTAATAGTTATAATTAAATGAAACTACATACAAATTGATTCAATTTCCCAAATAGAGAAGATGTAGTAAATCTCAAAACACAACAAGTAATACATGAAATTGGAATTACATGTCAAATTACAGCCAACAGAATATATATCCCACAAAATAAAGTGCAAAACAATGACATTCTCTCCTATTTCAATTTATAAGTAATTATTTAATAAAAAAATAACAGGAAAAGAGAATTTCAAACCTTTCTACAAATGTTGAGCCCAAGAGAATTTTGAGAATTTTAAGAGAATACTTTCTTTATCTGTAATGGGAAAAAAATGAGATTATATTGGAAGAGGTGATGATAGAGAGATTTTGGAAAGAAAAAAACTTACCTCCGGAAGGTTCAGGACCACCATCCTCGTGATTATGACATGACCCAATAGAAAATTGACATTTGTTGCTTTCATATTTTTCTATTATTTTATTAAAATTCAAATTTCATACATATCTCCCCAATATCTCTTCAATATTTCTTTTGCTTTTTTCTTTTATTTTTTCTCTTCTCAAAACGTATTTGATGTTTCTCCTCCATCTTCTCCCTCCCTAAAATCTCTCACCTTTCACTACTTTTTTCTCCTGAATGCATCATGGTCTACTTCATTAAAACTTGTTGAGCATAATAAAAGATTTGTTGGCATAGGTGGAGGGCAACATTAGTCAAAATTAGTCGTTATTTATTCTCAATTATTAGAACTTGTTGATGTGTTTTTCACGTTGTTGCTATGGACCTCTTAATGTAATCAAACTGCTGAAAACATATGTAGTATTTTATTTGAGAGATGAGAAAAAACCATAAAAGAAAAATAAAAAGCAAATCAAGATTGTGTACCTTTAAATTTTCATTTTGCAACTTGGTTCAGGAAGAGTGAAGGAGATGCATTCAGAAGAGAAAAAAAGTGGAAGGTGAGAAATTTTAGGGAGGGAGAAGAGGGAGGAGAAACGTCAAATACGTTTCGAAAAAAAAAGAAAAGTAAAAGAAATATTGAAGAGATTTTGAGGAGATATGCATGAGATATGAAAGCAACAAATGTCAATTTCCTATTGGACCATGTCATAATCAGGAGGATGGTGGCCCTGAACCTTCCGGAGGAAAGTTTTTTCCATTTTGGAAAGGACCACTTAAAAAGTAGAGTTCTCGTAAGAGGTGGGGAGAGAGATTTTTGAAACTTGGAAACAAAGGAATGTGAGATGTACGTATGAGAGAAAAAGAGAAAGATTAGTGGAAGTGGGGGAGAATGTGGCAGAGGAAGAAAAATAATTGGGAAGAGGGAAATGTGAGAGAAAAGGAGATATCGTTGGGAGAGTGAGGGAAGTTACCTAGAATTGGGTGAATGGAGGAGAGAGAAAGAGTAAAAAAGGGAAGTGAGAGAAAGAAATTAATGAAAATTAAAAAGAATTAAAAAAAAAAATTCTCTTTTGAACTCTCATTTCTAATTCCATAATTTCAATTTCAAATTTATTATTATTATTATTGCTATTTAGCTATTTTTGTATTTTTTAATAACAAATAATAAATATCAAATAAAATTTAAAATGACCTGAACAAAATATGGTATCTACAGGAGACTTGTTATTTTGGTCGTCGCTCAAAGTTATCTTGGAATCTACAACAAATTCCTTGAGGTGGTCCTTGTGAATGAAATCCTCGACCTCTTCCTTGAGATCACAACATTCTTATGTTGAGTGACCATGATCCCGATGGAAGAGGCAGTATCTTCCTTTAACTTTTTTGTGAGATGACACCTCTATCTTTTCAGGCCATCTGAGTGGTTTCTTGTCTTTGATCTCCATTAGAATATGTTCGAACAAGATTGTTTGTTGGGGTATACTTCCTCAGAGGGTCTCGTTGATCTAATCGGTCTTGTGTTCTGTCGAAATTTTGCTTTGAATGGAGTAGCTCTCCTACATTCATGTATTTTTGTGCTCAACTTAATGCTTTTGTAAAAGTTGTTGGGGTTCTTTTTCCAAAATAGAATAACAATGCCTTATATTTTACACCAAACATGAAGGCGAGAAGCGATGTTCTATTGGTGAGATCTTCGACTAGTAATTTCTTCTTATTGAGGCGAGCCACATATTCTTTGAGGCTCACCGTCAATTTATGTTTTATGGTAAGGAGATAGGTCACAGGTAAACTTCTATTCCGCCCTCCAATGAATTGTGTGCCAAATGCCCTGACCAATTCTTAAAATGAGAAAGTTGAGTTTCTCCTTAATTGTCGAAACCAGATGTTGGTCGTGCCAATTAATTTGAAAGAAAATACTTTGTACCTGATAGGCTCTATCATCCCGTAGAGGTCTATCCATTCTCTATATGCGTCCAAATTGTCGAAGGATCTAATGGGTCGTCATACTACTTGATAGCAGATAGTTTAAACTTCGGAGGGATCTTTCTCTCATTATCTCTTCCACGAACGGTGAATCTGCCTGATCTATTGTCTCCTCAAGATCGTGTCCTCTGTACTTTCATTTTTCAATAAACTCTCGTGCTTTCTCTGTTTGCTCGTGTCGGCTAAGTGGCTTCTCCTTGTCGAGCATGATTTTCAGAGACCTAGTCGGCTTTCCAGGTAGCTCTTGCTGTTGTGCGCTGTTGACTTTTGCTGTTGTGCAGTTATCAAATCTGGTCGGTGCAAGATACCTGGTCAGCGGAAGAGACCTGGTTGGCGGGAGAGACCTAGTCGGCATAAGAGACATGGTCGGCATAAGAGACTTGTCGGCAGAAGAGACCTGGTTGGTATAAGAGACCTGGTTGGTATAAGAGACCTTGTTGGTGGAAGAGACCCGGTTAGTAGAAGAGACCTAGTCGGCTGAGACCTGGTTATGCCTTGGACCTGGTTATACCTTGACTAGTCATGTCCTGGATCTGGTTTTGTCGAGGAGCCGAAACAGCTCGACGCCAAGATCTAGTTTGTTTAAATAGAAGAAAAAAGATGTTTGAAGTCAAATTTAATTTGGACTACTAGATTGATATGAAATAAAAAATCAAGGTTGATATTTAATTTGAAAGAGGAATAAATATACAATATAATAACACCTTTTTTTTTTTTTTTTTCAAACATTNTTTTTTTTTGCTTTCAAACATGTCTGCATCAAGGTTTCAAATGTCGATCGACATGTCGACGTGTCAAAGGCCTTGACATCGACAAAGGGGGGAAAATCATTTTTCCTCCTTATCCACGATATCAAACTATCGTCAAAATATCGAAAAAATCTCGAAATTTCGACAATATGTATCGACATATTGCTAAAAAAAAAACTTAAAAAAGCTAGGCCCATGAAAAGGGCCCAACCCATCCATGAATGGATGGTTGAAGAGATGTGAGAGNAATGACAAATTTTCGAATCTATGCTTCAATTTCTAATAACTCAATTTAATCATCATATCATATGTATGTATATATCAATATTTCATACTTGGTTCAATTATATAACTAATATTAGATTTGATTATAAATTATTAATTAAACATAATTAAGCAGAGTTGAATTTCAATTTGCTAACTCAAATTATTTTCATCCATTTTCGTTATCTTGTTCAGACATTTCTATCGACATCAACATTTTCGTAAGTTACTTATATTTTTACATATAATGGATAAAAATTGAGTTTTAATTGTTATTTACTAATTAAAATAATTTTTATTAATTTCCATAATTTTCATAATTTTCTCCAAATATCCATCGATATCAACATATCCGTAAAATAAGGATCTTAACATTTCCATCGACAACCTTGGTGTGCACCTCTTTTATTTTGACACTTCTTTTAAAAGTTTTTTCTGGTAAACCAAACTCGAGATGAATCGAACCGAACCAGCAAAGCAGACCAAACGGGTAAGTTGGACCGAACTGCTAAACTGGACCAAACCAAAGAGAACCAGACCTCACACAAACCCTAACAACAAGATGTCCCTATAATTCACAGCAAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGGTTGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGTATCTTTTGAGCTGTTGAAATCATGTTTACGTTACATTTTTTTACTATTCAAATTCATGAATTGATTTTATTTGCAATTTGACGTTCACTTTGATTATATAGGAAGAAGAGAATATTGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGTAGCTTATGGGTACTATTTTTTTTCCCCTTATTTTATTGTTTGCAAGTTAATTGAGTATATGATTTGTAATTTCTTCGTGAAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAACGTGAGTTGGTTATTCCTTTTTGTTAGTTTATTGTCAAAATTTCTTGCATTTGCCTGTATGGAGTTTAAACCTCCTACTTAATGATAATGAGAGTGTAACATCCACTTAATTGAGTTCTAACGCGACTTAAGATAATAGTTGCATTTCTCACTGATAATTTGTTGGGTTTCAGATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTCGAGGGGTGAGTTTTTCTTGATATGAGGTTTGATAACTCTTTGGCATGTTGTAGAATACTGTTATCTAACAAACAAAATTGGCGTTTTAAATTTTTGTTCATTCTATCTACTTCTATCCTTATCTTTCTTCTTGGTTTGAAAATTGGGAGTCTTATGTTTATTGGAATCTTACAGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGTATTTTCCTTGATCTATTCCCCTATTGATATAATTTATAGTTTACCGATTTTAAATTCTATTGACTGGTGACTCCATTTTATGTATTGCAACTATCACCGATACAACAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATCTTGGATTGTAAGTGTTATTATTTTGATTTATATGTAATGAATCTCATTTTATTTTTGTTTCTATATATAATGCAACAAAAAGAGACGTTCTCGACTTCTTAATGTTAAAAATGAAAGGAAAATTAGAATGAAGTTTGTTATTGGCAAGTATTAGGAAAAATAAAAGCTCCAACTTTTTTGTTACTAGTTTATAGATTGAAGACAGAAGCTTGATACTTCATCATTACCAAATTATGTTTTATCATAATCTTATTATTTGTGCCCATTGTTTTGTTATATTTAGATTTTAGATTCATTTTTCCATGTAATTTTAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATGTAAGACTTTTTTCCCTCTCTTTTTGCTTAAATTCTATCTCAAGGGCATGCACTTAGGTTATGGCTTTCTGCTTGGAACTTCTACATTAAACTTTGGAGGACATTTGGTGATCATTTTCCAACAGTAGTAGTGCATATGGTGGAACTTTGTACTTTGCACTTGTGTGCTTGTGGTTATCCCATGGTTAGTATTAATACTTCTACATTAGCTAGGATTTAATTTGATAACTCTAAACATGGGTGTAGTGCTGGTATCATTTTGCTTCTCTCCTTTGCCCCTGCTAAAAAGAGACAATATAGAGAGAAAAGAAGAAAATAAGAAAAAACTGGACTTCCACATGAAGGCAATGGGCAGTTTGTGCATTTGATTTCTGACATAAACACATTCTGAACATGTACACGTGATGTGAAGTGTTTGTTTTGTTATTTTCTTGAAATCTTTGCTGCATTGGGTTTTTAGGATATGCAAGGTATATGCTTGGGGAGTGAATTATAAGAAATTGAAAGATAGGTTTTCATAAAAGTTCAAATTTATGGAACTAAGATATAAATTAATAAGAGAAAAAAAATCCATAGAAATTAGTATAGAAAAAGGGAAGAGAATTAATAGATTCACTTGATAGAACTTGCTGCAGTGGTGTGACAAGATGTGAAAGTGATAAATAAGATGCAAGTTATTTTTAAGGTGTGATTTTTATCTTGTTGTTGGAAAAGTATTTTCCATGGACAAATATTTGCTTGAAATTGAACAAATGAGGAAGTAAGTTTGTACCTCCAATTCTTTACCACATAATTCCTCATGTTTTAAAATCATTAATATGTCTAAAGGTATATAAAAATACTTGTATTAAATGTGTCCTTCTGTCAAAGTACTAAAATTTTTAAAATATGGTATGATGTTATGGCTTATGTCCATGTCTTATCCATGACGTCCTGAATCCATGTGCGAGACTTTCAGGTCATTTCATCATAGTTGTGCATCTTGAATCTGTAGTTTGGGTGGCTGTGTAGAAAATTAATAGTTTGGTTGTCCATTATGTATTGATCTTATTTTACCGTATGTATTTTTTTCCTAGGGTATTATTTTGATAGAACTCTTGGTCGTTACGGATCATAACAATTCGTTGAAAACATTTTATTGTGGTTAATGGAAAGAACATTATATTTTTTTAAATTATCATGACTGTTTCTATCTTCAGCATTTTAAGATGCTTCACTTTCTGGTTTTGCCTGGATATGGATGTTGTCTTAAGCCTGTTTTGTCTTTTGCAGCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGGTATGAATCCCCTGTTTTTCATTTCAACATGGTATGTTTAGTGCTACTTATGTTTCTGAATGAGTGATTAACCATTCTGGAATTTGAACAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATATGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

mRNA sequence

ATGGCTAGTTGGAGCTTCCTCCAACTTGGACCCTGGTCGAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGCCGCTCCTCACCGTCGATACCATTCAGCCTTCATCGCCCATCATCCGCTACGTTCAGCCACACAAGGAAGAAGAGAATATAGAGCGTGAACTTGCAGATATAACTTTTGAAGAGTTGCAGAGAGTGCAGTCTGATGGGTCACATTTGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACTAGTTAGTAGATTGAGAAAAGCCAATCAGGCTCCTAAGAATGTGGTACAAGATCCATGTTTCGAATCTTTATCTGGCACTTTCGATGTTGAGGGCCAAAATCGTGAGTCGCCACCTTCAAATACCGCCATCGCTAGTGGTCTAGCCGGATCTGTCGTGGTCTCGCTGGAAGCAAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGGTTGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATTGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAACATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTCGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATATGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Coding sequence (CDS)

ATGGCTAGTTGGAGCTTCCTCCAACTTGGACCCTGGTCGAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGCCGCTCCTCACCGTCGATACCATTCAGCCTTCATCGCCCATCATCCGCTACGTTCAGCCACACAAGGAAGAAGAGAATATAGAGCGTGAACTTGCAGATATAACTTTTGAAGAGTTGCAGAGAGTGCAGTCTGATGGGTCACATTTGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACTAGTTAGTAGATTGAGAAAAGCCAATCAGGCTCCTAAGAATGTGGTACAAGATCCATGTTTCGAATCTTTATCTGGCACTTTCGATGTTGAGGGCCAAAATCGTGAGTCGCCACCTTCAAATACCGCCATCGCTAGTGGTCTAGCCGGATCTGTCGTGGTCTCGCTGGAAGCAAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGGTTGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATTGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAACATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTCGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATATGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Protein sequence

MASWSFLQLGPWSSSSQIPAYPWLGWPLLTVDTIQPSSPIIRYVQPHKEEENIERELADITFEELQRVQSDGSHLTYQKTNQEKKGGRANKNRPMEVSSKKLVSRLRKANQAPKNVVQDPCFESLSGTFDVEGQNRESPPSNTAIASGLAGSVVVSLEANPIGYLQQIRTPETNGATAAWSLVVAAGTNGYQSICELGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

Homology

[Close]

BLAST of MS028760 vs. NCBI nr
Match: XP_022141752.1 (ribosomal RNA processing protein 36 homolog [Momordica charantia])

HSP 1 Score: 399.8 bits (1026), Expect = 2.9e-107
Identity = 223/248 (89.92%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 203 MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 262
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 263 TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 322
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 323 FIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNK 382
           FIYENNLPAEKE                         DKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 383 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 426
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

[Close]

BLAST of MS028760 vs. NCBI nr
Match: XP_038889542.1 (ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-90
Identity = 198/253 (78.26%), Postives = 211/253 (83.40%), Query Frame = 0


Query: 203 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 262
           MKK S    SS KQ+M EESED ESSS +D +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKHSSSVLSSGKQIMEEESEDFESSSSDDSLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 263 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 322
           S +QKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPKNMVRDPRFESLSGTLDV+GF
Sbjct: 61  SMFQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDVDGF 120

Query: 323 KKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILA 382
           KKRY+FIYEN LPAEKE                         DKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYENKLPAEKEELKKQLRKTNDPNVVEELKNQLSWIDKQFKSDSTKRVDAAILA 180

Query: 383 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 426
           KHK KEREAAK GKKPFYLKKSEIRKQRLIEKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLIEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 240

[Close]

BLAST of MS028760 vs. NCBI nr
Match: XP_008456647.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902001.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902002.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >KAA0031699.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa] >TYK04413.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 3.2e-90
Identity = 197/253 (77.87%), Postives = 211/253 (83.40%), Query Frame = 0


Query: 203 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 262
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 263 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 322
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 323 KKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILA 382
           KKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 383 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 426
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

[Close]

BLAST of MS028760 vs. NCBI nr
Match: XP_022925402.1 (ribosomal RNA processing protein 36 homolog [Cucurbita moschata] >KAG7025163.1 Ribosomal RNA processing protein 36-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 343.2 bits (879), Expect = 3.2e-90
Identity = 196/244 (80.33%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 208 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 267
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 268 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 327
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 328 NNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREA 387
           NNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKASDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 388 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 426
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

[Close]

BLAST of MS028760 vs. NCBI nr
Match: XP_023535518.1 (ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-89
Identity = 195/244 (79.92%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 208 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 267
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 268 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 327
           KKG RANKNRPMEVSSKKPV RFREVIQAPK+MVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKSMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 328 NNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREA 387
           NNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 388 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 426
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

[Close]

BLAST of MS028760 vs. ExPASy Swiss-Prot
Match: B6K8A0 (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rrp36 PE=3 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-21
Identity = 81/271 (29.89%), Postives = 134/271 (49.45%), Query Frame = 0


Query: 197 LGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGS 256
           L  +N   +     + VM E E  + ++ E    ++ E+ +R+L  + F EL  A+    
Sbjct: 18  LEDLNDTSEEDYEVEDVMSEVESTDEANDESEEKTDLESTQRQLKSIPFSELLEAQRALK 77

Query: 257 HSTYQKTNQEKKGGRANKNR-----------------------PMEVSSKKPVSRFREVI 316
               + T  +K G + +KNR                       P+E+SSK+ V RFREV+
Sbjct: 78  SEKVKFT--QKNGAKLSKNRRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVV 137

Query: 317 QAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEDKQ---------------- 376
             PK + RDPRF++LSG L+V+  K  Y F+ E  L   K+ +Q                
Sbjct: 138 HVPKPLRRDPRFDTLSGNLNVDKVKNNYGFVMEYRLSEIKQLEQELKSCREQERRERIKE 197

Query: 377 ----FKSDTTKRVD----AAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLK 421
                +S   +R +    A +L +H+  E+E  + GKKPFYLKKSE +K   ++KY +++
Sbjct: 198 ALKSLRSKLERRKEDERTARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSME 257

[Close]

BLAST of MS028760 vs. ExPASy Swiss-Prot
Match: A7SL20 (Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 GN=v1g245966 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-21
Identity = 87/239 (36.40%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 214 MEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKT----NQEKKG 273
           + +S D ES + +   + E E+++ EL+ + F ELQ  +       Y        +E+  
Sbjct: 5   LSDSSDDESPTDDCSDEGEVEHLKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQ 64

Query: 274 G------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 333
           G      +  KN+ P E+SSK+ V + R+V+Q  K M RDPRF+ LSG  + + F+K Y+
Sbjct: 65  GIPDLETKKKKNKGPQELSSKQRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYS 124

Query: 334 FI----YENNLPAEKEDKQFKS------------------DTTKRVDAAILAKHKNK--E 393
           F+     E     EKE K+ K+                   + K  +A   +K K K  E
Sbjct: 125 FVNDIRVEEKKSVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKETE 184

Query: 394 REAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 418
           RE  + GKKPFYL+KSE++K  L EKY  LKS GKL  Y+ +RR+K A+KDRR+VP  R
Sbjct: 185 RELVQKGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDRRHVPERR 243

[Close]

BLAST of MS028760 vs. ExPASy Swiss-Prot
Match: A6RKG5 (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.9e-17
Identity = 79/247 (31.98%), Postives = 125/247 (50.61%), Query Frame = 0


Query: 218 EDLESSSPEDFVDSEEENIERELADVTFEELQRAR------SDGSHSTYQKTN------- 277
           E+++    E+  +SEEE      A ++F  L +A+      S       +K+N       
Sbjct: 52  EEVDDDDDEELSESEEE-ASNGAASISFGALAKAQATMSKPSKRDSKNLKKSNGDGWEDN 111

Query: 278 --QEKKGG--------RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDV 337
              E+K G        R++KN P EVSSKK VSR REV+   K  +RDPRFE  +G +D+
Sbjct: 112 EATERKAGKKDQRDFTRSSKNAPTEVSSKKAVSRRREVVPVKKREIRDPRFEPTNGPVDM 171

Query: 338 EGFKKRYNFIY---ENNLPAEKE---------------------DKQFKSDTTKRVDAAI 397
           +  +K Y+F+    E+ +   KE                     + + K+D  KR    +
Sbjct: 172 QKIEKNYDFLVDYREDEMKKLKETIRKTKDEDEKEKLKRELLRMESRKKTDARKRKAREV 231

Query: 398 LAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDR 418
           L KH+ +E+E  K GK P+YLKK+E +K+ L++ +  LK   +LD  +ERRR+K   K++
Sbjct: 232 LDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTFGELKGR-QLDRVIERRRKKVEGKEK 291

[Close]

BLAST of MS028760 vs. ExPASy Swiss-Prot
Match: A4R1G4 (rRNA biogenesis protein RRP36 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=RRP36 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.8e-17
Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 0


Query: 249 QRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKN---MVRDPRF 308
           + AR   + +  +        GR  K+ P E+SSK+PVSR+REV++ P N     RD RF
Sbjct: 116 REARQGNAKTVSKAAASASAPGRKTKSAPEEMSSKRPVSRYREVVKPPPNARPKPRDVRF 175

Query: 309 ESLSGTLDVEGFKKRYNFI--YENN---------------LPAEKEDKQFK--------- 368
           E      D + F++ Y F+  Y N+                PA++ED + K         
Sbjct: 176 EQELTGEDYQRFRRNYAFLDEYRNDEMAKLREIIARKKGVTPADREDAKLKLRKMEDEKR 235

Query: 369 SDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYME 418
           S   K  +  ++ +HK KE+E  K GKKPF+LKKSE +K  L++KY  + S G++D  +E
Sbjct: 236 SQDRKDREHELMREHKKKEKELVKQGKKPFFLKKSEQKKLLLMDKYAGM-SKGQVDKAIE 295

[Close]

BLAST of MS028760 vs. ExPASy Swiss-Prot
Match: A7E4K0 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.9e-17
Identity = 82/269 (30.48%), Postives = 130/269 (48.33%), Query Frame = 0


Query: 196 ELGQINGMKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDG 255
           E+G+ +  ++ SS        S++ E    E+  +SEEE      A ++F  L +A++  
Sbjct: 38  EIGRDDNEEEESS--------SDETEDEVEEEASESEEETSNDAAASISFGALAKAQATM 97

Query: 256 SHSTYQKTNQEKKGG-----------------------RANKNRPMEVSSKKPVSRFREV 315
           S  + + + + KK                         R++KN P E+SSKK VSR REV
Sbjct: 98  SKPSKRDSKKSKKSNADGWEDNEATERKAGKKDQRDFTRSSKNAPTEISSKKAVSRRREV 157

Query: 316 IQAPKNMVRDPRFESLSGTLDVEGFKKRYNF---------------IYENNLPAEKE--- 375
           +   K  +RDPRF+   G +D+   +K Y+F               I +     EKE   
Sbjct: 158 VPVKKREIRDPRFDPTHGPVDMGKIEKVYDFLVDYREDEIKKLRKTIKKTKDEDEKEKLK 217

Query: 376 ------DKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTL 418
                 + + K+D  KR    IL KH+ +E+E  K GK P+YLKK+E +K+ L++ Y  L
Sbjct: 218 RDLLSMESRKKTDAKKRKAREILDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTYGEL 277

[Close]

BLAST of MS028760 vs. ExPASy TrEMBL
Match: A0A6J1CKR1 (ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LOC111012036 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.4e-107
Identity = 223/248 (89.92%), Postives = 223/248 (89.92%), Query Frame = 0


Query: 203 MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 262
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 263 TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 322
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 323 FIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNK 382
           FIYENNLPAEKE                         DKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 383 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 426
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

[Close]

BLAST of MS028760 vs. ExPASy TrEMBL
Match: A0A1S3C3C0 (ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496541 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 197/253 (77.87%), Postives = 211/253 (83.40%), Query Frame = 0


Query: 203 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 262
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 263 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 322
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 323 KKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILA 382
           KKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 383 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 426
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

[Close]

BLAST of MS028760 vs. ExPASy TrEMBL
Match: A0A5A7SR00 (Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00090 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 197/253 (77.87%), Postives = 211/253 (83.40%), Query Frame = 0


Query: 203 MKKRS----SSSKQVM-EESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 262
           MKK S    SS KQ+M EESEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 263 STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 322
           S YQKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 323 KKRYNFIYENNLPAEKE-------------------------DKQFKSDTTKRVDAAILA 382
           KKRY+FIYE NLPAEKE                         DKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 383 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 426
           KHK KEREAAK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

[Close]

BLAST of MS028760 vs. ExPASy TrEMBL
Match: A0A6J1EBL5 (ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432703 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 196/244 (80.33%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 208 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 267
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 268 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 327
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 328 NNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREA 387
           NNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKASDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 388 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 426
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

[Close]

BLAST of MS028760 vs. ExPASy TrEMBL
Match: A0A6J1I8W9 (ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472062 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 5.9e-90
Identity = 195/244 (79.92%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 208 SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 267
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 268 KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 327
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 328 NNLPAEKE-------------------------DKQFKSDTTKRVDAAILAKHKNKEREA 387
           NNLPAEKE                         DKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 388 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 426
           AK GKKPFYLKKSEIRKQRL EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

[Close]

BLAST of MS028760 vs. TAIR 10
Match: AT1G12650.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-54
Identity = 132/246 (53.66%), Postives = 162/246 (65.85%), Query Frame = 0


Query: 204 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 263
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 264 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 323
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 324 YNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKH 383
           YNF +E+ LP E+E+ + K   TK  +                          AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 384 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 421
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

[Close]

BLAST of MS028760 vs. TAIR 10
Match: AT1G12650.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-54
Identity = 132/246 (53.66%), Postives = 162/246 (65.85%), Query Frame = 0


Query: 204 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 263
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 264 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 323
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 324 YNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKH 383
           YNF +E+ LP E+E+ + K   TK  +                          AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 384 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 421
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

[Close]

BLAST of MS028760 vs. TAIR 10
Match: AT1G12650.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-54
Identity = 132/246 (53.66%), Postives = 162/246 (65.85%), Query Frame = 0


Query: 204 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 263
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 264 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 323
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 324 YNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKH 383
           YNF +E+ LP E+E+ + K   TK  +                          AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 384 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 421
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

[Close]

BLAST of MS028760 vs. TAIR 10
Match: AT1G12650.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 3.0e-54
Identity = 132/246 (53.66%), Postives = 162/246 (65.85%), Query Frame = 0


Query: 204 KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 263
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 264 TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 323
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 324 YNFIYENNLPAEKEDKQFKSDTTKRVD--------------------------AAILAKH 383
           YNF +E+ LP E+E+ + K   TK  +                          AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 384 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 421
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

The following BLAST results are available for this feature:

BLAST of MS028760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141752.1	2.9e-107	89.92	ribosomal RNA processing protein 36 homolog [Momordica charantia]	[more]
XP_038889542.1	1.4e-90	78.26	ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ...	[more]
XP_008456647.1	3.2e-90	77.87	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902...	[more]
XP_022925402.1	3.2e-90	80.33	ribosomal RNA processing protein 36 homolog [Cucurbita moschata] >KAG7025163.1 R...	[more]
XP_023535518.1	1.2e-89	79.92	ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS028760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6K8A0	3.3e-21	29.89	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]
A7SL20	4.3e-21	36.40	Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 G...	[more]
A6RKG5	2.9e-17	31.98	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=33264...	[more]
A4R1G4	3.8e-17	33.84	rRNA biogenesis protein RRP36 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-461...	[more]
A7E4K0	4.9e-17	30.48	rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1...	[more]

BLAST of MS028760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKR1	1.4e-107	89.92	ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3C3C0	1.6e-90	77.87	ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A5A7SR00	1.6e-90	77.87	Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1EBL5	1.6e-90	80.33	ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1I8W9	5.9e-90	79.92	ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MS028760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12650.1	3.0e-54	53.66	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.2	3.0e-54	53.66	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.3	3.0e-54	53.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12650.4	3.0e-54	53.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 371..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..231
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	RRP36	coord: 271..339 e-value: 2.9E-18 score: 66.4 coord: 88..133 e-value: 5.2E-9 score: 36.3 coord: 337..411 e-value: 1.8E-16 score: 60.6
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 216..418 coord: 47..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028760.1	MS028760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing