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MS028550 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCGTATTCGTGCCGGTTAGACGTCGGCCATGAAATCCATCACTATACCGAGCAGATCACGGGCATTCACATCTCGGTCAAACGGAACTATGCGCGATTCGCGAGAGAATCGCCTTCAGCAAGGTATGGCATTCAGGGTCTGAACGCGGGGAGAAATCTTTCTTCATAGATACAAGACATTCGTTGCTGATCTAAAAAAGATCTTATCCCTTTCAAACAAAGGGCGTTAGCGGACGTTTTTCATTCTTCACCCGGTCCAACGTAGCGTTTCCAAAGTCAAAGTCAACCTAACCGGTTACCTTTGGAAACGCGCTAAAACAGGCCTCTCTATAGGTTCGCCTTTCTAATCGTTTCGAATATTCTAGTATATAGTTTTAGCCAGATCGTCTGAAGCATGAACAGAATCACCTTTGTTCCGCAGGCCTAGCGAGTTAAGCGAGTTCCTTTTTTTTTCAAAGGAGGTCCTTTTCTTTCTCCGGACCGATGACTCGCTTGTTCAGTACTGCTAACTATTATAGGAGGAGTCCCCTCGAGACTACCAGTAGTTTCGGTTGTAGAATCGCGTGCAAGTGAGGTTGTGGTTGTATTGACTGCAAGCGGAACGTAGGCGCTTTAGGTGTGTGTTGACCATGCACTCTCGCGGAATGGAATGTCGTATGTATGATAGAGGTGGTGTGGTGATTGACCTCAATGCTAATGGTTATCCCCAAGGTTCAACGAATGAATAAAGCTATGATCGTACCCGGATAGAGATGATGGTCTTCCTCTTCTGTCTCCAAGCCGGCCATAATAGAATAGATAGGCGAAGCAGCCAATAGCTGTCTGTTCTCGCCTATCGATAGATAGTAGGTTGCTTCCAAGCTCAAACCATTGGAAACGGAATTGCTACTTTCTTCTTGTTATTGAGAGAGTGGTATTCTCCACCCCTGTAAAAGAAAGTCTAGGGAGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGACCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCGATGACTTGGTGA ATGTCGGCGTATTCGTGCCGGTTAGACGTCGGCCATGAAATCCATCACTATACCGAGCAGATCACGGGCATTCACATCTCGGTCAAACGGAACTATGCGCGATTCGCGAGAGAATCGCCTTCAGCAAGAAAGTCTAGGGAGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGACCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCGATGACTTGGTGA ATGTCGGCGTATTCGTGCCGGTTAGACGTCGGCCATGAAATCCATCACTATACCGAGCAGATCACGGGCATTCACATCTCGGTCAAACGGAACTATGCGCGATTCGCGAGAGAATCGCCTTCAGCAAGAAAGTCTAGGGAGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAGGATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGACCCCAACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTTTTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCGATGACTTGGTGA MSAYSCRLDVGHEIHHYTEQITGIHISVKRNYARFARESPSARKSRERTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGADPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKSGLLAMTW Homology
BLAST of MS028550 vs. NCBI nr
Match: PHT68651.1 (hypothetical protein T459_28138 [Capsicum annuum]) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS028550 vs. NCBI nr
Match: EXB98289.1 (hypothetical protein L484_014275 [Morus notabilis]) HSP 1 Score: 90.1 bits (222), Expect = 1.8e-14 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0
BLAST of MS028550 vs. NCBI nr
Match: NP_064006.1 (orf122 gene product [Beta vulgaris subsp. vulgaris] >YP_004222367.1 hypothetical protein BevumaM_p134 [Beta vulgaris subsp. maritima] >YP_004842172.1 hypothetical protein BemaM_p128 [Beta macrocarpa] >CBJ14006.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBJ17582.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBJ20700.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX24977.1 hypothetical protein [Beta macrocarpa] >BAA99318.1 orf122 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-13 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MS028550 vs. NCBI nr
Match: CBL54140.1 (hypothetical protein [Beta vulgaris subsp. maritima]) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-13 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MS028550 vs. NCBI nr
Match: YP_006291837.1 (orf60 [Daucus carota subsp. sativus] >AEY81205.1 orf60 [Daucus carota subsp. sativus]) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
BLAST of MS028550 vs. ExPASy TrEMBL
Match: A0A2G2YGD6 (Proton_antipo_M domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_28138 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.8e-20 Identity = 55/67 (82.09%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS028550 vs. ExPASy TrEMBL
Match: W9SC77 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014275 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 8.7e-15 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0
BLAST of MS028550 vs. ExPASy TrEMBL
Match: E6ZDZ2 (Uncharacterized protein orf122 OS=Beta vulgaris subsp. maritima OX=350892 GN=orf122 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MS028550 vs. ExPASy TrEMBL
Match: Q9MFC4 (Orf122 protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=orf122 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MS028550 vs. ExPASy TrEMBL
Match: G2XLY7 (Uncharacterized protein OS=Beta macrocarpa OX=343494 GN=orf122a PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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