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MS028549 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG ATGCCGAGAGAAAGAGTTAGACTTCTATATTGCGTTGCGAAGAGAGATCGAAGACGAAGATTTTCTGACGCAGTGTGGGCACTGGATGGAAAAGACAGAGAAGAGAACAACCCACCGGAAGGGCATACCTCAGGAGCACCCCCGGGAAACATCGAGATGCACGAAGCCGACCTATATCTCGAATCGAAAGAAAAATGCAGGAAAGGAAAATTAAATATGAAAGAAAAAAGATGCTTTGGGAGTGTGAGATACGCGGACGGGGAGTACGCAGCCGAACAACCGCAGGAGCTTCCAGCAGTGATAGCTGCCCCCACCAGATGGGCCGCCCAAAACCTGGAGCTAACATTTCAATCGGAAATCCACGTCGGATCGCGGCGAGACGAAAAAGGCAGACTGAAGCGGAGGATCACAAAATGCAACACAACAAGGGGCAAACCAAGCGCTTGCGCGAAAGAAGAAGCGAATCAATCAGAATGGAGACATGGAGAAGAGGCGAAAGAGAGATTTTCGAGCCTGCAAGCTGCAAGCAACAACGGCGGAAAAGCCGTTGCGCGCTAG MPRERVRLLYCVAKRDRRRRFSDAVWALDGKDREENNPPEGHTSGAPPGNIEMHEADLYLESKEKCRKGKLNMKEKRCFGSVRYADGEYAAEQPQELPAVIAAPTRWAAQNLELTFQSEIHVGSRRDEKGRLKRRITKCNTTRGKPSACAKEEANQSEWRHGEEAKERFSSLQAASNNGGKAVAR Homology
BLAST of MS028549 vs. NCBI nr
Match: YP_009941458.1 (hypothetical protein [Fagus sylvatica] >QOC70516.1 hypothetical protein [Fagus sylvatica] >QVG61319.1 hypothetical protein [Fagus sylvatica] >QVG61375.1 hypothetical protein [Fagus sylvatica]) HSP 1 Score: 205.3 bits (521), Expect = 4.6e-49 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of MS028549 vs. NCBI nr
Match: KAC9566655.1 (hypothetical protein E3N88_45625 [Mikania micrantha]) HSP 1 Score: 127.1 bits (318), Expect = 1.6e-25 Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of MS028549 vs. NCBI nr
Match: CAB4076424.1 (unnamed protein product [Lactuca saligna]) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-25 Identity = 66/93 (70.97%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of MS028549 vs. NCBI nr
Match: GEW53690.1 (NADH dehydrogenase subunit 2, mitochondrial [Tanacetum cinerariifolium]) HSP 1 Score: 119.4 bits (298), Expect = 3.3e-23 Identity = 62/83 (74.70%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of MS028549 vs. NCBI nr
Match: GEY23800.1 (hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium] >GEY23812.1 hypothetical protein AMTR_s05569p00002680, partial [Tanacetum cinerariifolium]) HSP 1 Score: 119.0 bits (297), Expect = 4.3e-23 Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 0
BLAST of MS028549 vs. ExPASy TrEMBL
Match: A0A7L7T4J0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=ORF1 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of MS028549 vs. ExPASy TrEMBL
Match: A0A2N9GHD9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26884 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of MS028549 vs. ExPASy TrEMBL
Match: A0A2N9FGL4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13901 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.2e-49 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of MS028549 vs. ExPASy TrEMBL
Match: A0A5N6L8L8 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_45625 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 7.6e-26 Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of MS028549 vs. ExPASy TrEMBL
Match: A0A6S7LAR3 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS5158 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25 Identity = 66/93 (70.97%), Postives = 73/93 (78.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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