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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACTTTCCGGACCAACCAACCCGGATCTGCCCTCGAAAGTCTCTCTGCATTTTGGGAGCGGAGCATGCAAAATAGAGCAATGGATCTTCGGCCGAATTCGATTTTGAATGGCACGACTCTTTCGATTTTTGTGCTGGCATTTGAGTTGTCTCTCCTCCTCTTTCAATCGACACACTCGACACAGATAGGCTCCGGTGGCCCCGGCTTCTGCCTCTATCAGGCGGCGGCAGCCCCACCTCCACAGCCACAGCATGGAGGAGCAGCTCCTTAA mRNA sequence ATGACTTTCCGGACCAACCAACCCGGATCTGCCCTCGAAAGTCTCTCTGCATTTTGGGAGCGGAGCATGCAAAATAGAGCAATGGATCTTCGGCCGAATTCGATTTTGAATGGCACGACTCTTTCGATTTTTGTGCTGGCATTTGAGTTGTCTCTCCTCCTCTTTCAATCGACACACTCGACACAGATAGGCTCCGGTGGCCCCGGCTTCTGCCTCTATCAGGCGGCGGCAGCCCCACCTCCACAGCCACAGCATGGAGGAGCAGCTCCTTAA Coding sequence (CDS) ATGACTTTCCGGACCAACCAACCCGGATCTGCCCTCGAAAGTCTCTCTGCATTTTGGGAGCGGAGCATGCAAAATAGAGCAATGGATCTTCGGCCGAATTCGATTTTGAATGGCACGACTCTTTCGATTTTTGTGCTGGCATTTGAGTTGTCTCTCCTCCTCTTTCAATCGACACACTCGACACAGATAGGCTCCGGTGGCCCCGGCTTCTGCCTCTATCAGGCGGCGGCAGCCCCACCTCCACAGCCACAGCATGGAGGAGCAGCTCCTTAA Protein sequence MTFRTNQPGSALESLSAFWERSMQNRAMDLRPNSILNGTTLSIFVLAFELSLLLFQSTHSTQIGSGGPGFCLYQAAAAPPPQPQHGGAAP
Homology
BLAST of MS028541 vs. NCBI nr
Match: GFP88924.1 (hypothetical protein PHJA_001036100 [Phtheirospermum japonicum]) HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05 Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 0 Query: 24 QNRAMDLRPNSILNGTTLSIFVLAFELSLLLFQSTHSTQIGSGGPGFCLYQAAAAPPPQP 83 QNRAMDLR L+ TTLSI LAFELS LFQS S QI P + PP QP Sbjct: 3 QNRAMDLR-RIPLSSTTLSISALAFELSPFLFQSKDSMQIALVAPASASIRRRQNPPSQP 62
Query: 84 QHGGAAP 91 Q+GGAAP Sbjct: 63 QYGGAAP 68
BLAST of MS028541 vs. NCBI nr
Match: GFQ08821.1 (hypothetical protein PHJA_003026100 [Phtheirospermum japonicum]) HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04 Identity = 36/66 (54.55%), Postives = 40/66 (60.61%), Query Frame = 0 Query: 24 QNRAMDLRPNSILNGTTLSIFVLAFELSLLLFQSTHSTQIGSGGPGFCLYQAAAAPPPQP 83 QNRAMDLR L+ TTLSI LAFELS LFQS S QI P + PP QP Sbjct: 3 QNRAMDLR-RIPLSSTTLSISALAFELSPFLFQSKDSMQIALVAPASASIRRRQNPPSQP 62
Query: 84 QHGGAA 90 Q+GGA+ Sbjct: 63 QYGGAS 67
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
GFP88924.1 | 4.4e-05 | 56.72 | hypothetical protein PHJA_001036100 [Phtheirospermum japonicum] | [more] |
GFQ08821.1 | 3.7e-04 | 54.55 | hypothetical protein PHJA_003026100 [Phtheirospermum japonicum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS028541.1 | MS028541.1 | mRNA |
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