MS028533 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGTGAAAAGGGAGAGGTGATGCTCTGTGCTGGGGCTCTCGGAAGCCCACAGCTTCTGCTTCTGAGTGGCATTGGACCGAGGCCGTCCCTCTCATCGTGGGGAATTCCTGTGTCTCATCACTTGCCTTATGTCGGACAGTTCCTCTATGATAACCCCCGAAATGGCATCTCAATTGTGCCCCCAATGCCATTGGAGCACTCTCTGATACAAGTCGTGGGCATAACCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTTTTCATTCGGAACCCAGCTTCACCACTGTATCTCACTGTGGCCACCCTGATGGAGAAGATTACTGGGCCACTCTCCGCAGGTTCACTCCGGTTGCCATCTACGGATGTCAGGGTTAACCCAATTGTCCGGTTCAACTACTTTAGTAATCCGGGTGATGTGGAGCGGTGTGTGAATGGCACCCGCAAGATCGGTGATGTACTGAGGAGCCGTTCCATGGGGGATTTCCAATTCAGGGAATGGTTTGGGGGCCGAGATTGAAGATACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCGCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGGCAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTTGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGATGCTTGGACGGTCAGTGTGTTTGTTGTTATCTGAATGCTTGAGTGTTTTTGTTGGTTTGTTTTGGCAGGTATGTTGGTATGAAGATATTCAGAGAGAGAATGATCTCGAGTTGACCACTTACCCTGTTGTGCCAAAAGGAACTATAAGCGGACTTAGCTGCTAA ATGGTGCGTGAAAAGGGAGAGGTGATGCTCTGTGCTGGGGCTCTCGGAAGCCCACAGCTTCTGCTTCTGAGTGGCATTGGACCGAGGCCGTCCCTCTCATCGTGGGGAATTCCTGTGTCTCATCACTTGCCTTATGTCGGACAGTTCCTCTATGATAACCCCCGAAATGGCATCTCAATTGTGCCCCCAATGCCATTGGAGCACTCTCTGATACAAGTCGTGGGCATAACCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTATGTTGGTATGAAGATATTCAGAGAGAGAATGATCTCGAGTTGACCACTTACCCTGTTGTGCCAAAAGGAACTATAAGCGGACTTAGCTGCTAA ATGGTGCGTGAAAAGGGAGAGGTGATGCTCTGTGCTGGGGCTCTCGGAAGCCCACAGCTTCTGCTTCTGAGTGGCATTGGACCGAGGCCGTCCCTCTCATCGTGGGGAATTCCTGTGTCTCATCACTTGCCTTATGTCGGACAGTTCCTCTATGATAACCCCCGAAATGGCATCTCAATTGTGCCCCCAATGCCATTGGAGCACTCTCTGATACAAGTCGTGGGCATAACCAATTCAGGGGCAGGGGCTTACCTTGAAGCAACTTCCAATGTCATACCTTTTGTCTCCCCTGCTCGCTCTGTATGTTGGTATGAAGATATTCAGAGAGAGAATGATCTCGAGTTGACCACTTACCCTGTTGTGCCAAAAGGAACTATAAGCGGACTTAGCTGCTAA MVREKGEVMLCAGALGSPQLLLLSGIGPRPSLSSWGIPVSHHLPYVGQFLYDNPRNGISIVPPMPLEHSLIQVVGITNSGAGAYLEATSNVIPFVSPARSVCWYEDIQRENDLELTTYPVVPKGTISGLSC Homology
BLAST of MS028533 vs. NCBI nr
Match: KAF4392710.1 (hypothetical protein G4B88_029449 [Cannabis sativa]) HSP 1 Score: 192.2 bits (487), Expect = 2.8e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MS028533 vs. NCBI nr
Match: KAF4349905.1 (hypothetical protein G4B88_002327 [Cannabis sativa]) HSP 1 Score: 192.2 bits (487), Expect = 2.8e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MS028533 vs. NCBI nr
Match: THG00223.1 (hypothetical protein TEA_020656 [Camellia sinensis var. sinensis]) HSP 1 Score: 184.9 bits (468), Expect = 4.5e-43 Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of MS028533 vs. NCBI nr
Match: XP_028113899.1 ((R)-mandelonitrile lyase-like [Camellia sinensis]) HSP 1 Score: 184.9 bits (468), Expect = 4.5e-43 Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of MS028533 vs. NCBI nr
Match: PSS07265.1 ((R)-mandelonitrile lyase-like [Actinidia chinensis var. chinensis]) HSP 1 Score: 181.4 bits (459), Expect = 5.0e-42 Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of MS028533 vs. ExPASy Swiss-Prot
Match: Q9SSM2 ((R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.0e-34 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of MS028533 vs. ExPASy Swiss-Prot
Match: P52706 ((R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.8e-22 Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS028533 vs. ExPASy Swiss-Prot
Match: Q945K2 ((R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.8e-22 Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of MS028533 vs. ExPASy Swiss-Prot
Match: P52707 ((R)-mandelonitrile lyase 3 OS=Prunus serotina OX=23207 GN=MDL3 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.3e-20 Identity = 49/96 (51.04%), Postives = 68/96 (70.83%), Query Frame = 0
BLAST of MS028533 vs. ExPASy Swiss-Prot
Match: O24243 ((R)-mandelonitrile lyase 1 OS=Prunus dulcis OX=3755 GN=MDL1 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.6e-19 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 0
BLAST of MS028533 vs. ExPASy TrEMBL
Match: A0A7J6DUX9 ((R)-mandelonitrile lyase OS=Cannabis sativa OX=3483 GN=G4B88_002327 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.4e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MS028533 vs. ExPASy TrEMBL
Match: A0A7J6HEB8 ((R)-mandelonitrile lyase OS=Cannabis sativa OX=3483 GN=G4B88_029449 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.4e-45 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of MS028533 vs. ExPASy TrEMBL
Match: A0A4S4DCA1 (GMC_OxRdtase_N domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_020656 PE=3 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.2e-43 Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of MS028533 vs. ExPASy TrEMBL
Match: A0A2R6QF72 ((R)-mandelonitrile lyase-like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17603 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42 Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of MS028533 vs. ExPASy TrEMBL
Match: A0A2R6QF71 ((R)-mandelonitrile lyase-like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17604 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.4e-42 Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of MS028533 vs. TAIR 10
Match: AT1G73050.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 147.5 bits (371), Expect = 7.4e-36 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of MS028533 vs. TAIR 10
Match: AT1G12570.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 87.8 bits (216), Expect = 7.0e-18 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of MS028533 vs. TAIR 10
Match: AT5G51950.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of MS028533 vs. TAIR 10
Match: AT5G51950.2 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of MS028533 vs. TAIR 10
Match: AT1G72970.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein ) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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