MS028467 (gene) Bitter gourd (TR) v1

Overview
NameMS028467
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold41: 621198 .. 626193 (-)
RNA-Seq ExpressionMS028467
SyntenyMS028467
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCCCTGGAGGCTAAGCAGGTGTCTCAGGTGAAGAAATGGACGTCCTTCGATGATCTAGAGAAGGCCATTCGAGTCTTGCTAGAGTTCGGCAAGTTGGTGAGGAACATCCTTAACCGAAGCTTCGACTTCGCGACAGATGAGGTGAGGAAGTTTGCTTCTAAGCTTGACCTGTCTACCATTTACAAGGCCTATGAGGCCGTGCTGGACGAGGAGGATGACGAAGAAGAGACCCTAGTTGACAAACCTGCTGGCGAGACTGAGGGGCGACTGCTGACGCCTGAGGTAGATTCTTCTGGAGATTCTTTTATTTCTTTTCAGTAATATTTCTGCCTAGCTGGGGCGTGTATGCCTCGACTCGACAATTCTATATGCCACCTGAGCCTATACACTTGGGTGGGATCTATCCGATCTAATGGAATCTTTATTTTGACGAGTCGCCTAGTAATGGTTTGGCAAGTAGGGTGACTGGCCAAGATAATGTTTTAGCTGATCAAATACTTCTTGGCACTCCTGAGTCCACTCGAACTTTTCTTTTTTCCTCAAGACTTTGAAGAAGGGGAGACACTTGTCCGTGGATTTGGACACGAAGTGGTTCAGCGCGCCACCTTTCCATTAAGATGCTGAAGTTGCTTCAAGTTCTTGGGAGGCTCCATCTCGAGCATAGCTCGAATCTTATCTGGATTGGCCTCGATCCGTCGCTGATTCACCATGAAGTCCAGAAACTTACCAGAGGCCACGCCAAAGGTGCATTTTTCGGGGTTCAGCTCATGTTATAGCAACGGAGGACTTTGAAAGTCTCAGTCAGGTCGGCTATATGTGAGCTGACCTGATTGCTTTTTACCAGCATGTCATCGACATAAACCTCGAGTTTCTGCCGATCTGCTTAGCAAACATCATGTTCACCATCCGCTGATATGTGGCTCCTGCGTTCTTCAGGCCAAACGACATAACCTTGTAACAGTAGAGCCCCTGGTCGGTCACGAAAGATGTGTGCTCCTAGTCAGGTACATGCATTTTGATCTGGTTATAGCCTGAGTATGCATCCATGAACGTCAACAGCTCATGCCCCACGGTGGCATCGACGAGGTAATCTATTCGAGGTAGCGGGAAGCTATCCTTCGGGTAGACTTTGTTTAGGCTGGTGAAGTCCATGCAGACACACCATTTACCGTTAGCTTTTTTAACTAAAACTACATTAGAAAGCTACGCGGGGTAGCGAACTTCTTTTATAAAGTCAGCTCGTAAGAGCTTCTCAACTTCCTCACTTATTACAAGACTACGCTCAGTTTTGACAGGCCGACGCTTTTGCTTTTCAAGCCTAAAGGAGGGATCTATATTTAACCTATGCACCATAATGCTCGGGTTGATCACGGGCATGTCCTCGTTCGACCATGCAAAGACGTCGTCGTTCGCTAGTAGGAAGTTGATGAGCTGAATCCTGGTCTCTTCCCCCAACTTGGTGCCGATGCTGACCTGCCTGTCAGGACTGAGGGACGGCACAAGCTTTAGCTCTTCAATTGGTGTCCCCCGAGTCGGCTCATCCATAGGTGGGGCCTCAGCTACAATGGTTGCGCAAGTAGTAGAGCCGTTCAAGGCTGCAACATAACACTCTCTTGAAATTTTCTGCTCGCCTTGGATGGTTGCTATCCCAACCGCAGTGGGGTACTTCATCATCTGGTGACAAGTTGAAGGGATAGGCTTCAGCTGATTGATGAAAGGTCGACCTAGTATTGCATTGTAGGTCGAGCTGTGATCGATTACCACAAACTCAGCAATTGAGGTGACTTGATGCTACATTCGCCGATGGTGACCGGAAGTGAGATGCAACGCTCTGTAGTGACGGATTCTCCAGTGAACCAAACCAATGGCGTCGGGCATGACTTGAGTTGAGCCCGCTCCCATCCCAAGGCCGAATATACCGACATGGAAAGCACGTTGGTTGACGCTTCTCCGTCGATGAGGACCCGTTCTACCATAAAATGGTCGATTAGTGGCGCGATGACCAAGGCATCATTGTGGTGCAGATGTACCCCTTCAGTGTCCTGCTCGTCGAATAGTATAGGAAGGGTCGGCTCTTTCGAATATGAGGTGCACACTTTATGACTGCAGGTCAGTCTCCCGTACGTTGAAGTGGCGACCGGGTTCTCTCTCTTTGGTCATCCTTGTTTCACCTGGTCGGCTCGTCCCGACTGCGTGAGCCAACGTACTTCTTCAGGTCGCCTCAACGGATCAGCTCCTCAATTTGGTCCCTCAGCGCATAGCAGGTTGACGTGTCGTGGCCATGGTCTTTATGTAACCTGCAGTACTTACTCTTGTCTTTCTTCTTGTCAGGGACCCTGGACTTCTTAGGCGGTGAGAGTAACTTCTCAAACCCGCCTTCCTCCATAGCTGCTAATATCTCAGCTATAGGTTTATTGATTGGCGTATACTTGTCGAACCGAGGTCCTTTCTTGAACTCGGTTCGGCTGTCTTTGCGGCAGTCATTCTTGTCCTCAGTTCGTCGACTCGAACGTCAGTCATAGTCTCTCCGCTTCTAAAACTTGTCGTCTTGATTGCTGTAACGCTTCCCACCGTTGGCCTTCCACAACTCCAAGCCGTCAATATACCTCCGAGCTTGAATGAGGAGCTTATTCAGGGAAGTGGGTGGATTACTCCCGAGCTCGACCATCAAGTTCCTGTCATTCAACCCAATGGTGAAATAGATGATCGCCATCTCGTCAGTGTAATTGACGACTTTAACGTGCTCGTCCATGAATCGAGCAATGTAATCGGTCAGGGACTCCCGGTCCTGCTGCTTGACCGTCCCAAGGTGGGAGGCGAGAAACTTCATCAGCTGGCAAGCTGAGAACTGATTGATAAACATCTTGCGTAGCTGCTGATAGCTGCTGATTGAATTTGGTTTCAGCTACCTATATCAAATTCGAGCTAATCCCTACAAAGCAATCTGGAAGGCGCGACATTTGATCGCATCACTTGCCGCGAGAAAGTCCATCTTCCACTCGAAAACCTCAACATACGAGATAGGGTCACCCGACCCATCATACGGAGTCATTGTCGGGGCCTTGAATTTGTGCGGGATCGGCTCGTCCAGTATTTCTTGGGAGAATGGTGGTTCGTCCCTTTCAGCAAAATCCACCTGGTTCGGTGACTTGTATTGCTTTTCGAGATCCTCGACTTCCTTCCGCATCACTTCCTTCAACTGGTCCATCTCCGACCTAATGCTGAATGAGGCTCAGGCCGAGGGGCGGTGGTCATCCACCTCCTCACTCCCTGCTCGGATACGATGTCTCAGATCATCAGGTGCGTTTCTTCTACGTTGTATAATCTCGCGATCGCTCTGGCGCACTGATTACGCTTGTTTACATGCGTAAAAAGAAGGTTTTAGATGCTGTCTTTACTATGTTTTAGCTTTGTTTCGGACTTTTCTCGATCATTTGAGTTCCAATTCATGCAAAATTCATATATGATGGTTTGTGGTTGGCTTATATTATATTTATGACATTTTAGGACCATTTGGGAGTGGAAATTAATCAAAAGAAGCAAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTAACTTGAAGTAATTCGGGCTAGGTTTTATCATTATAAGTCCAAATCCCAAATCCAAAACCATTATTTGTGACCACTTCCCATTTTACAAGAATCACTCATTTCAACATTCACTATTCTTTAAAACTTTAGAGTTTGGAAATTATTTAGAAGTCCTTGACGATCGATACTTGGATACTCCATCCATTTTATATTACTCTGACAGGTGTGCGCTTGCATCTATAGAATTGTTACCACGCTTAGTGCGTGCGTTCAACAAACGCCCAGTCACGCACACGACCTGCTGACCCGAGGTCCCCTTTGTTCCACCCGATGCCGATCGACTCGGTGACTTGCACGATGATGTTCACGGCGAGTGGGTGTCCTCCCCCGTAGGGGAGAAAGCAGTTCCACACTCCACTGTGGTCCCCCTCGCCCTTCTCTATGGCCGCAAGTCAGGCCTTCACCTCAGCAATGTCGGTGATGGCGTTGGGGACGATGGTCAGGTCGAGCAACGGGTCGGTGCTGTTGCCTGA

mRNA sequence

ATGGATGCCCTGGAGGCTAAGCAGGTGTCTCAGGTGAAGAAATGGACGTCCTTCGATGATCTAGAGAAGGCCATTCGAGTCTTGCTAGAGTTCGGCAAGTTGGTGAGGAACATCCTTAACCGAAGCTTCGACTTCGCGACAGATGAGGTGAGGAAGTTTGCTTCTAAGCTTGACCTGTCTACCATTTACAAGGCCTATGAGGCCGTGCTGGACGAGGAGGATGACGAAGAAGAGACCCTAGTTGACAAACCTGCTGGCGAGACTGAGGGGCGACTGCTGACGCCTGAGGTAGATTCTTCTGGAGATTCTTTTATTTCTTTTCAGCCGAGGGGCGGTGGTCATCCACCTCCTCACTCCCTGCTCGGATACGATGTCTCAGATCATCAGGTCCCCTTTGTTCCACCCGATGCCGATCGACTCGGTGACTTGCACGATGATGTTCACGGCGAGTGGGTGTCCTCCCCCGTAGGGGAGAAAGCAGTTCCACACTCCACTGTGGTCCCCCTCGCCCTTCTCTATGGCCGCAAGTCAGGCCTTCACCTCAGCAATGTCGGTGATGGCGTTGGGGACGATGGTCAGGTCGAGCAACGGGTCGGTGCTGTTGCCTGA

Coding sequence (CDS)

ATGGATGCCCTGGAGGCTAAGCAGGTGTCTCAGGTGAAGAAATGGACGTCCTTCGATGATCTAGAGAAGGCCATTCGAGTCTTGCTAGAGTTCGGCAAGTTGGTGAGGAACATCCTTAACCGAAGCTTCGACTTCGCGACAGATGAGGTGAGGAAGTTTGCTTCTAAGCTTGACCTGTCTACCATTTACAAGGCCTATGAGGCCGTGCTGGACGAGGAGGATGACGAAGAAGAGACCCTAGTTGACAAACCTGCTGGCGAGACTGAGGGGCGACTGCTGACGCCTGAGGTAGATTCTTCTGGAGATTCTTTTATTTCTTTTCAGCCGAGGGGCGGTGGTCATCCACCTCCTCACTCCCTGCTCGGATACGATGTCTCAGATCATCAGGTCCCCTTTGTTCCACCCGATGCCGATCGACTCGGTGACTTGCACGATGATGTTCACGGCGAGTGGGTGTCCTCCCCCGTAGGGGAGAAAGCAGTTCCACACTCCACTGTGGTCCCCCTCGCCCTTCTCTATGGCCGCAAGTCAGGCCTTCACCTCAGCAATGTCGGTGATGGCGTTGGGGACGATGGTCAGGTCGAGCAACGGGTCGGTGCTGTTGCCTGA

Protein sequence

MDALEAKQVSQVKKWTSFDDLEKAIRVLLEFGKLVRNILNRSFDFATDEVRKFASKLDLSTIYKAYEAVLDEEDDEEETLVDKPAGETEGRLLTPEVDSSGDSFISFQPRGGGHPPPHSLLGYDVSDHQVPFVPPDADRLGDLHDDVHGEWVSSPVGEKAVPHSTVVPLALLYGRKSGLHLSNVGDGVGDDGQVEQRVGAVA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS028467.1MS028467.1mRNA