MS028465 (gene) Bitter gourd (TR) v1

Overview


Name	MS028465
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold41: 599010 .. 600831 (-)
RNA-Seq Expression	MS028465
Synteny	MS028465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGACAATCGACCTAGGGGCCTGACAACCGTAATCGTCGGTCGAAACGGTTCCAACGACCTTGTCGCCCTACCTGCCTATAAAAGAGACACTCCATCCTATATTACAGGTACGCTATTCTGCTCCAAGACCAACTTACTACAGCTCGTGCTCACACTAATTGGACATCAAAGTGTTTGTTCTTTGTGCAAATCCCACTATCTCACAATCGCACCTCGGCAGCTCGTCCCAGTTAGAACGTGATTGACCTGTGTTGCTCGGTGGAATATTGCATCAACAGTGGCTATGAAAATTTTTATTTTGGTTAAAAGATAATTAGATAACCATTTTGAAAGTAGCAAAACTATTTGAAGGGTATCTTCATTGGAATATTAAATTTTAGTTGACATAAGATCTGCATATATCCATAGATTAGACATTAATATGAGTGGTAAATCAATATTTTAATTATATCGCAAAAAAAGAAAAAAATAACAAAACTTAAAAACTATCACTTATATGAAACATAATATTAATATTAATTATTTGTAATTTATTAAAAAATAAAATTATTTATGTGTTAGTTTAATTATTTGTTGTAAATTTTCTATTTTTATAATATTTCTAGAAATATATATTTTCTTTATATTTCTATACATTTGAGACGTATAGTCTACATACATATTTAAAACATAATTTTGTAGAGTTGGGTTTCACTTTTAACTTTAATATAACAGATTTATTCCGCTGTAGACGGCTCAGGTGGAGAGAATCAATTTCCAATTTCATTATGTGGGCCCACGTTCTCCATTTTATCGTCATTCAGTCAAGTATCCACCAACTACATTCTCTTATGTGTCACTATCATCAAATCAAATCAAATCCTCTCACCCAAATGTGGGTTCAGTCTCCCGTTTTTTGTTTTTGGTTTTAATTTTATTAAGAAATACAGAGTCTATTTGTTAACGTTTCTATTTCTTTTTTTGTTTCTTTATTTTTAATAAAAAAAAATTCATTTCATAGTTTTAATATCTATGAATTCAAGTATGATAAAACAATATTTTTATTTATGTTTTGGAATAAATTGGAAATGGGAACAAGAAAGAAGAAATTAGTTGTTTCGAAAATTTCTATACAATTTTTGGAATGTTCCCAAAAATTGAGAAACAAGAAACATATTAGTTACAAAATGCATAGATTTATTAAGAAAATTAGAAACCAGAAACCAGAAATAGGAACGTTACCAAACGAGCCCACATTTAACATTATCAAAATAAGGTTTCGCATTTTTTTAGAAACATTCTCAAAATTATACAGAAATTTGGGAAAAAAAAAGGTTTAGTATTTATTGTTCTCATTTCCAATTTTTCCAAAACGTAAATAAAAATATAGTTTTATCATTCTTGAATCTACGAGTGTTGGAGACATGAAATTCTATTTTTCTTCACTAAAAATAAGAAAATAGAAACAAGACATGGAAACGTTACCAAACAGGCACTTAGTGTGCACAATAAACTAAAATACTTTAAAAGGTGTTTACAGCGATTATGGTCCTAGGCCACAAGGCCTTCAGACGAGCAGTCCGACCGAAAAACAAGAGAACCTGAAACCAAACGAACTCAATGTCGGTGCGGTGTCCTGTCTAAGATACTCCGACGATCAAGTTAGTAATCGGAAAAGAAATAGGAAAAAGACACCGAATATGCGAGTGACAGATTTTTCACTTACTTGGTGACAATGAGGGTCCTTCCTTTTATAGCCTCGGGCAGCTGACAAGAAAAGACGACGGTTAGTCGTGGCGGGGACGCACCATGCTCTACGGGAGCATTGGAAAGCGTAA

mRNA sequence

ATGTCCGACAATCGACCTAGGGGCCTGACAACCGTAATCGTCGGTCGAAACGGTTCCAACGACCTTGTCGCCCTACCTGCCTATAAAAGAGACACTCCATCCTATATTACAGGTGTTTACAGCGATTATGGTCCTAGGCCACAAGGCCTTCAGACGAGCAGTCCGACCGAAAAACAAGAGAACCTGAAACCAAACGAACTCAATGTCGGTGCGGTGTCCTGTCTAAGATACTCCGACGATCAACCTCGGGCAGCTGACAAGAAAAGACGACGGTTAGTCGTGGCGGGGACGCACCATGCTCTACGGGAGCATTGGAAAGCGTAA

Coding sequence (CDS)

ATGTCCGACAATCGACCTAGGGGCCTGACAACCGTAATCGTCGGTCGAAACGGTTCCAACGACCTTGTCGCCCTACCTGCCTATAAAAGAGACACTCCATCCTATATTACAGGTGTTTACAGCGATTATGGTCCTAGGCCACAAGGCCTTCAGACGAGCAGTCCGACCGAAAAACAAGAGAACCTGAAACCAAACGAACTCAATGTCGGTGCGGTGTCCTGTCTAAGATACTCCGACGATCAACCTCGGGCAGCTGACAAGAAAAGACGACGGTTAGTCGTGGCGGGGACGCACCATGCTCTACGGGAGCATTGGAAAGCGTAA

Protein sequence

MSDNRPRGLTTVIVGRNGSNDLVALPAYKRDTPSYITGVYSDYGPRPQGLQTSSPTEKQENLKPNELNVGAVSCLRYSDDQPRAADKKRRRLVVAGTHHALREHWKA

Homology

The following BLAST results are available for this feature:

BLAST of MS028465 vs.


Match Name	E-value	Identity	Description

BLAST of MS028465 vs.


Match Name	E-value	Identity	Description

BLAST of MS028465 vs.


Match Name	E-value	Identity	Description

BLAST of MS028465 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028465.1	MS028465.1	mRNA