MS028343 (gene) Bitter gourd (TR) v1

Overview


Name	MS028343
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GDSL esterase/lipase
Location	scaffold110: 333307 .. 333777 (-)
RNA-Seq Expression	MS028343
Synteny	MS028343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGCTTCTCCTAGTTGTGCATTTTGGGCAACTTTAGGTCTAGTTTTTGTGCTTGTTGGTAGCTTGGTTTGTGAAGCAGAAGGGAGAGCGTTCTTCGTGTTCGGAGACTCTCTCGTCGACAATGGGAACAATGACTACTTGCTCACGACCGCCCGAGCCGATAACTACCCTTACGGCATTGACTACCCGACTCGCAGACCCACCGGCCGATTCTCCAATGGATTTAACATACCCGATCTCATCAGTTAGTTTTCTTTTTCTTTTATGCTCTTTTAGGCATAAAAGAGTGAAGTGATTTGTAATGTAATTATGTGGGGTTGTTTTTCAGGTCAGGCAATGGGGTCTCCATCTACATTGCCCTATTTGAGCCCTCAACTCAATGGAGAAAATCTTCTTGTTGGGGCCAACTTTGCCTCTGCTGGAATTGGGATTCTCAATGACACTGGAATTCAGTTTGTAAGTTGA

mRNA sequence

ATGGAGAAGGCTTCTCCTAGTTGTGCATTTTGGGCAACTTTAGGTCTAGTTTTTGTGCTTGTTGGTAGCTTGGTTTGTGAAGCAGAAGGGAGAGCGTTCTTCGTGTTCGGAGACTCTCTCGTCGACAATGGGAACAATGACTACTTGCTCACGACCGCCCGAGCCGATAACTACCCTTACGGCATTGACTACCCGACTCGCAGACCCACCGGCCGATTCTCCAATGGATTTAACATACCCGATCTCATCAGTCAGGCAATGGGGTCTCCATCTACATTGCCCTATTTGAGCCCTCAACTCAATGGAGAAAATCTTCTTGTTGGGGCCAACTTTGCCTCTGCTGGAATTGGGATTCTCAATGACACTGGAATTCAGTTTGTAAGTTGA

Coding sequence (CDS)

ATGGAGAAGGCTTCTCCTAGTTGTGCATTTTGGGCAACTTTAGGTCTAGTTTTTGTGCTTGTTGGTAGCTTGGTTTGTGAAGCAGAAGGGAGAGCGTTCTTCGTGTTCGGAGACTCTCTCGTCGACAATGGGAACAATGACTACTTGCTCACGACCGCCCGAGCCGATAACTACCCTTACGGCATTGACTACCCGACTCGCAGACCCACCGGCCGATTCTCCAATGGATTTAACATACCCGATCTCATCAGTCAGGCAATGGGGTCTCCATCTACATTGCCCTATTTGAGCCCTCAACTCAATGGAGAAAATCTTCTTGTTGGGGCCAACTTTGCCTCTGCTGGAATTGGGATTCTCAATGACACTGGAATTCAGTTTGTAAGTTGA

Protein sequence

MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS

Homology

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BLAST of MS028343 vs. NCBI nr
Match: XP_022144404.1 (GDSL esterase/lipase At5g33370-like [Momordica charantia])

HSP 1 Score: 260.8 bits (665), Expect = 6.3e-66
Identity = 126/128 (98.44%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY
Sbjct: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. NCBI nr
Match: KAA0061402.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           ME  SP+  F+  LGLV   +GS VC+A+ RAFFVFGDSLVDNGNN++LLTTARADNYPY
Sbjct: 1   MENPSPTFPFFPILGLVLFFLGSFVCQAQARAFFVFGDSLVDNGNNNFLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNG NIPDLIS+AMGSPSTLPYLSPQL GENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGLNIPDLISEAMGSPSTLPYLSPQLRGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. NCBI nr
Match: XP_008441804.1 (PREDICTED: GDSL esterase/lipase At5g33370-like [Cucumis melo] >TYK28662.1 GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           ME  SP+  F+  LGLV   +GS VC+A+ RAFFVFGDSLVDNGNN++LLTTARADNYPY
Sbjct: 1   MENPSPTFPFFPILGLVLFFLGSFVCQAQARAFFVFGDSLVDNGNNNFLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNG NIPDLIS+AMGSPSTLPYLSPQL GENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGLNIPDLISEAMGSPSTLPYLSPQLRGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. NCBI nr
Match: XP_022965808.1 (GDSL esterase/lipase At5g33370-like [Cucurbita maxima])

HSP 1 Score: 218.8 bits (556), Expect = 2.8e-53
Identity = 103/117 (88.03%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 12  ATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 71
           +TLGL+ +L+GSLVC+A+ RAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG
Sbjct: 5   STLGLILLLLGSLVCQAQARAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 64

Query: 72  RFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
           RFSNG+NIPDLISQA+GSPSTLPYLSPQL G+NLLVGANFASAGIGILNDTGIQF++
Sbjct: 65  RFSNGYNIPDLISQAIGSPSTLPYLSPQLRGQNLLVGANFASAGIGILNDTGIQFLN 121

[Close]

BLAST of MS028343 vs. NCBI nr
Match: XP_023536783.1 (GDSL esterase/lipase At5g33370-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 12  ATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 71
           +TLGL+ +L+GSLVC+A+ RAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG
Sbjct: 5   STLGLILLLIGSLVCQAQARAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 64

Query: 72  RFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
           RFSNG+NIPDLISQA+GS STLPYLSPQL G+NLLVGANFASAGIGILNDTGIQF++
Sbjct: 65  RFSNGYNIPDLISQAIGSQSTLPYLSPQLRGQNLLVGANFASAGIGILNDTGIQFLN 121

[Close]

BLAST of MS028343 vs. ExPASy Swiss-Prot
Match: Q9M8Y5 (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana OX=3702 GN=LTL1 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-48
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 7   SCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPT 66
           +C+    L  +F +V  L  + + RAFFVFGDSLVDNGNNDYL+TTARADNYPYGIDYPT
Sbjct: 4   NCSPLGFLISLFFIVTFLAPQVKSRAFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPT 63

Query: 67  RRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQF 126
           RRPTGRFSNG NIPD+IS+A+G PSTLPYLSP L GENLLVGANFASAGIGILNDTGIQF
Sbjct: 64  RRPTGRFSNGLNIPDIISEAIGMPSTLPYLSPHLTGENLLVGANFASAGIGILNDTGIQF 123

Query: 127 VS 129
           V+
Sbjct: 124 VN 125

[Close]

BLAST of MS028343 vs. ExPASy Swiss-Prot
Match: Q5PNZ0 (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana OX=3702 GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 16  LVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTGRFSN 75
           LVFV+ G +V   EGRAFFVFGDSLVD+GNN+YL+TTARAD+ PYGID+PTRRPTGRFSN
Sbjct: 14  LVFVMSGPIV--VEGRAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSN 73

Query: 76  GFNIPDLISQAMGSPS-TLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
           G NIPDLIS+A+G+    LPYLSP+L G +LL GANFASAGIGILNDTG QF++
Sbjct: 74  GLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFIN 125

[Close]

BLAST of MS028343 vs. ExPASy Swiss-Prot
Match: Q8LB81 (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana OX=3702 GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 7   SCAFWATLGLVFVLVGS-LVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYP 66
           S A  A LG   + V S LV +A  RAF VFGDSLVDNGNND+L TTARADNYPYGID+P
Sbjct: 4   SVAKLALLGFCILQVTSLLVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFP 63

Query: 67  TRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQ 126
           T RPTGRFSNG NIPDLIS+ +G  S +PYLSP L  + LL GANFASAGIGILNDTGIQ
Sbjct: 64  THRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQ 123

Query: 127 FVS 129
           F++
Sbjct: 124 FLN 126

[Close]

BLAST of MS028343 vs. ExPASy Swiss-Prot
Match: Q9SVU5 (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana OX=3702 GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39
Identity = 76/98 (77.55%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 31  RAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTGRFSNGFNIPDLISQAMGSP 90
           RAFFVFGDSLVD+GNN+YL+TTARAD+ PYGIDYPT RPTGRFSNG N+PD+IS+ +GS 
Sbjct: 30  RAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSE 89

Query: 91  STLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
            TLP LSP+L GE LL+GANFASAGIGILNDTG+QF++
Sbjct: 90  PTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLN 127

[Close]

BLAST of MS028343 vs. ExPASy Swiss-Prot
Match: Q9M2R9 (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana OX=3702 GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-21
Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 32  AFFVFGDSLVDNGNNDYLLTTARADNYPYGIDY-PTR-RPTGRFSNGFNIPDLISQAMGS 91
           A FVFGDSLVD GNN+YL T +RA++ P GID+ P+R  PTGRF+NG  I D++ + +G 
Sbjct: 34  ASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQ 93

Query: 92  PS-TLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
            S  +PYL+P  +GE LL G N+AS G GILN TG  FV+
Sbjct: 94  QSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVN 133

[Close]

BLAST of MS028343 vs. ExPASy TrEMBL
Match: A0A6J1CS78 (GDSL esterase/lipase At5g33370-like OS=Momordica charantia OX=3673 GN=LOC111014099 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.1e-66
Identity = 126/128 (98.44%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY
Sbjct: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. ExPASy TrEMBL
Match: A0A5A7UZR5 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749G00960 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           ME  SP+  F+  LGLV   +GS VC+A+ RAFFVFGDSLVDNGNN++LLTTARADNYPY
Sbjct: 1   MENPSPTFPFFPILGLVLFFLGSFVCQAQARAFFVFGDSLVDNGNNNFLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNG NIPDLIS+AMGSPSTLPYLSPQL GENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGLNIPDLISEAMGSPSTLPYLSPQLRGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. ExPASy TrEMBL
Match: A0A5D3DYL1 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00280 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           ME  SP+  F+  LGLV   +GS VC+A+ RAFFVFGDSLVDNGNN++LLTTARADNYPY
Sbjct: 1   MENPSPTFPFFPILGLVLFFLGSFVCQAQARAFFVFGDSLVDNGNNNFLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNG NIPDLIS+AMGSPSTLPYLSPQL GENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGLNIPDLISEAMGSPSTLPYLSPQLRGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. ExPASy TrEMBL
Match: A0A1S3B499 (GDSL esterase/lipase At5g33370-like OS=Cucumis melo OX=3656 GN=LOC103485856 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MEKASPSCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPY 60
           ME  SP+  F+  LGLV   +GS VC+A+ RAFFVFGDSLVDNGNN++LLTTARADNYPY
Sbjct: 1   MENPSPTFPFFPILGLVLFFLGSFVCQAQARAFFVFGDSLVDNGNNNFLLTTARADNYPY 60

Query: 61  GIDYPTRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILN 120
           GIDYPTRRPTGRFSNG NIPDLIS+AMGSPSTLPYLSPQL GENLLVGANFASAGIGILN
Sbjct: 61  GIDYPTRRPTGRFSNGLNIPDLISEAMGSPSTLPYLSPQLRGENLLVGANFASAGIGILN 120

Query: 121 DTGIQFVS 129
           DTGIQF++
Sbjct: 121 DTGIQFLN 128

[Close]

BLAST of MS028343 vs. ExPASy TrEMBL
Match: A0A6J1HQ21 (GDSL esterase/lipase At5g33370-like OS=Cucurbita maxima OX=3661 GN=LOC111465585 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 103/117 (88.03%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 12  ATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 71
           +TLGL+ +L+GSLVC+A+ RAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG
Sbjct: 5   STLGLILLLLGSLVCQAQARAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTG 64

Query: 72  RFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
           RFSNG+NIPDLISQA+GSPSTLPYLSPQL G+NLLVGANFASAGIGILNDTGIQF++
Sbjct: 65  RFSNGYNIPDLISQAIGSPSTLPYLSPQLRGQNLLVGANFASAGIGILNDTGIQFLN 121

[Close]

BLAST of MS028343 vs. TAIR 10
Match: AT3G04290.1 (Li-tolerant lipase 1 )

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49
Identity = 94/122 (77.05%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 7   SCAFWATLGLVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPT 66
           +C+    L  +F +V  L  + + RAFFVFGDSLVDNGNNDYL+TTARADNYPYGIDYPT
Sbjct: 4   NCSPLGFLISLFFIVTFLAPQVKSRAFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPT 63

Query: 67  RRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQF 126
           RRPTGRFSNG NIPD+IS+A+G PSTLPYLSP L GENLLVGANFASAGIGILNDTGIQF
Sbjct: 64  RRPTGRFSNGLNIPDIISEAIGMPSTLPYLSPHLTGENLLVGANFASAGIGILNDTGIQF 123

Query: 127 VS 129
           V+
Sbjct: 124 VN 125

[Close]

BLAST of MS028343 vs. TAIR 10
Match: AT5G33370.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 7   SCAFWATLGLVFVLVGS-LVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYP 66
           S A  A LG   + V S LV +A  RAF VFGDSLVDNGNND+L TTARADNYPYGID+P
Sbjct: 4   SVAKLALLGFCILQVTSLLVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFP 63

Query: 67  TRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQ 126
           T RPTGRFSNG NIPDLIS+ +G  S +PYLSP L  + LL GANFASAGIGILNDTGIQ
Sbjct: 64  THRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQ 123

Query: 127 FVS 129
           F++
Sbjct: 124 FLN 126

[Close]

BLAST of MS028343 vs. TAIR 10
Match: AT5G18430.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 16  LVFVLVGSLVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTGRFSN 75
           LVFV+ G +V   EGRAFFVFGDSLVD+GNN+YL+TTARAD+ PYGID+PTRRPTGRFSN
Sbjct: 14  LVFVMSGPIV--VEGRAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSN 73

Query: 76  GFNIPDLISQAMGSPS-TLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
           G NIPDLIS+A+G+    LPYLSP+L G +LL GANFASAGIGILNDTG QF++
Sbjct: 74  GLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFIN 125

[Close]

BLAST of MS028343 vs. TAIR 10
Match: AT5G33370.2 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 0


Query: 7   SCAFWATLGLVFVLVGS-LVCEAEGRAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYP 66
           S A  A LG   + V S LV +A  RAF VFGDSLVDNGNND+L TTARADNYPYGID+P
Sbjct: 4   SVAKLALLGFCILQVTSLLVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFP 63

Query: 67  TRRPTGRFSNGFNIPDLISQAMGSPSTLPYLSPQLNGENLLVGANFASAGIGILNDTGIQ 126
           T RPTGRFSNG NIPDLIS+ +G  S +PYLSP L  + LL GANFASAGIGILNDTGIQ
Sbjct: 64  THRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQ 123

Query: 127 FVS 129
           F++
Sbjct: 124 FLN 126

[Close]

BLAST of MS028343 vs. TAIR 10
Match: AT4G28780.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 7.5e-41
Identity = 76/98 (77.55%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 31  RAFFVFGDSLVDNGNNDYLLTTARADNYPYGIDYPTRRPTGRFSNGFNIPDLISQAMGSP 90
           RAFFVFGDSLVD+GNN+YL+TTARAD+ PYGIDYPT RPTGRFSNG N+PD+IS+ +GS 
Sbjct: 30  RAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSE 89

Query: 91  STLPYLSPQLNGENLLVGANFASAGIGILNDTGIQFVS 129
            TLP LSP+L GE LL+GANFASAGIGILNDTG+QF++
Sbjct: 90  PTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLN 127

The following BLAST results are available for this feature:

BLAST of MS028343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144404.1	6.3e-66	98.44	GDSL esterase/lipase At5g33370-like [Momordica charantia]	[more]
KAA0061402.1	2.1e-53	82.03	GDSL esterase/lipase [Cucumis melo var. makuwa]	[more]
XP_008441804.1	2.1e-53	82.03	PREDICTED: GDSL esterase/lipase At5g33370-like [Cucumis melo] >TYK28662.1 GDSL e...	[more]
XP_022965808.1	2.8e-53	88.03	GDSL esterase/lipase At5g33370-like [Cucurbita maxima]	[more]
XP_023536783.1	1.4e-52	87.18	GDSL esterase/lipase At5g33370-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS028343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8Y5	1.6e-48	77.05	GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana OX=3702 GN=LTL1 PE=2 SV=1	[more]
Q5PNZ0	1.9e-41	74.56	GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana OX=3702 GN=At5g18430 PE=2...	[more]
Q8LB81	1.9e-41	70.73	GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana OX=3702 GN=At5g33370 PE=2...	[more]
Q9SVU5	1.1e-39	77.55	GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana OX=3702 GN=At4g28780 PE=2...	[more]
Q9M2R9	2.9e-21	56.00	GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana OX=3702 GN=At3g50400 PE=2...	[more]

BLAST of MS028343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CS78	3.1e-66	98.44	GDSL esterase/lipase At5g33370-like OS=Momordica charantia OX=3673 GN=LOC1110140...	[more]
A0A5A7UZR5	1.0e-53	82.03	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold749...	[more]
A0A5D3DYL1	1.0e-53	82.03	GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165...	[more]
A0A1S3B499	1.0e-53	82.03	GDSL esterase/lipase At5g33370-like OS=Cucumis melo OX=3656 GN=LOC103485856 PE=3...	[more]
A0A6J1HQ21	1.3e-53	88.03	GDSL esterase/lipase At5g33370-like OS=Cucurbita maxima OX=3661 GN=LOC111465585 ...	[more]

BLAST of MS028343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04290.1	1.2e-49	77.05	Li-tolerant lipase 1	[more]
AT5G33370.1	1.4e-42	70.73	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT5G18430.1	1.4e-42	74.56	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT5G33370.2	1.4e-42	70.73	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT4G28780.1	7.5e-41	77.55	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036514	SGNH hydrolase superfamily	GENE3D	3.40.50.1110	SGNH hydrolase	coord: 27..128 e-value: 4.3E-22 score: 80.9
IPR001087	GDSL lipase/esterase	PFAM	PF00657	Lipase_GDSL	coord: 34..109 e-value: 8.1E-9 score: 36.3
None	No IPR available	PANTHER	PTHR45648:SF109	GDSL ESTERASE/LIPASE LTL1	coord: 17..127
None	No IPR available	PANTHER	PTHR45648	GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700)	coord: 17..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028343.1	MS028343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds