Homology
BLAST of MS028318 vs. NCBI nr
Match:
XP_022147822.1 (protein TIC 20-IV, chloroplastic-like [Momordica charantia])
HSP 1 Score: 612.1 bits (1577), Expect = 2.6e-171
Identity = 300/303 (99.01%), Postives = 302/303 (99.67%), Query Frame = 0
Query: 1 MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
MV GAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG
Sbjct: 1 MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
Query: 61 RQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
R+LKLSIRNAKQESGQELTFFSSRGTP+SHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS
Sbjct: 61 RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
Query: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL
Sbjct: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
Query: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
Sbjct: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
Query: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Sbjct: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
Query: 301 RPF 304
RPF
Sbjct: 301 RPF 303
BLAST of MS028318 vs. NCBI nr
Match:
XP_038888476.1 (protein TIC 20-IV, chloroplastic [Benincasa hispida])
HSP 1 Score: 468.0 bits (1203), Expect = 6.2e-128
Identity = 237/306 (77.45%), Postives = 258/306 (84.31%), Query Frame = 0
Query: 1 MVAGAPSIARL--RSPNPLL-PAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYA 60
M A PS ARL SPNPLL P A +T SVR KDV LKRC KPSQV +PQC R G +
Sbjct: 28 MFAVGPSNARLHCNSPNPLLPPPATATATGASVRYKDVFLKRCFKPSQVVIPQCHRFGSS 87
Query: 61 NMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRN 120
N+ +L LSI N KQE +EL SS+G +S LSAA+SPHLSGEQGSLFHKLPLLPPRN
Sbjct: 88 NLDTKLVLSITNTKQEPYKELKCSSSKGILISQLSAAASPHLSGEQGSLFHKLPLLPPRN 147
Query: 121 SASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDI 180
A KSPQAFRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHLD+
Sbjct: 148 CAGKSPQAFRDDSYSVKRHSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDV 207
Query: 181 DNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCT 240
DNLIFY+PG VQ LPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLLET L+IVW +
Sbjct: 208 DNLIFYIPGFVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETLLDIVWYS 267
Query: 241 SNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIG 300
SNF+PLIHYNGTYAMQYWAAVGF+YIS LLVCIRSSLLGTYA+IPFIF+NALIHTFFSIG
Sbjct: 268 SNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFSIG 327
Query: 301 RYYRPF 304
RYYRPF
Sbjct: 328 RYYRPF 333
BLAST of MS028318 vs. NCBI nr
Match:
XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 458.0 bits (1177), Expect = 6.4e-125
Identity = 237/307 (77.20%), Postives = 259/307 (84.36%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M A APS ARLR SPNPLL A +TA SVR +DVVLK C KPSQV +PQC RL
Sbjct: 28 MFAVAPSSGARLRCNSPNPLLAMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG MSHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLMSHLSAAASPTLGGEQGSLFHKLPLLPPR 147
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQAFRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 328 GRYFRPF 334
BLAST of MS028318 vs. NCBI nr
Match:
XP_022952618.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 453.4 bits (1165), Expect = 1.6e-123
Identity = 234/307 (76.22%), Postives = 258/307 (84.04%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M+A APS ARLR S NPLL A +TA SVR +DVVLK C KPSQV +PQC RL
Sbjct: 28 MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQ FRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 328 GRYFRPF 334
BLAST of MS028318 vs. NCBI nr
Match:
XP_022952620.1 (protein TIC 20-IV, chloroplastic-like isoform X3 [Cucurbita moschata])
HSP 1 Score: 453.4 bits (1165), Expect = 1.6e-123
Identity = 234/307 (76.22%), Postives = 258/307 (84.04%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M+A APS ARLR S NPLL A +TA SVR +DVVLK C KPSQV +PQC RL
Sbjct: 13 MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 72
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 73 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 132
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQ FRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 133 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 192
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 193 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 252
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 253 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 312
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 313 GRYFRPF 319
BLAST of MS028318 vs. ExPASy Swiss-Prot
Match:
Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 2.9e-56
Identity = 115/262 (43.89%), Postives = 165/262 (62.98%), Query Frame = 0
Query: 52 PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSG 111
PR+ + N+ +L+LS + + +E+ F++ T + L A P L+
Sbjct: 32 PRVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLA- 91
Query: 112 EQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQM 171
G H+ P+ P R +DD ++ KL + +PEWWWRTLACVPYL++LQ+
Sbjct: 92 -PGLRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQI 151
Query: 172 SNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFH 231
S+ +Y+ P LE H I ++I+++PG++ P WF M+Y L Y VV+NK+ PH+LRFH
Sbjct: 152 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 211
Query: 232 VMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYAR 291
+MMGMLLETAL ++WCTSNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+
Sbjct: 212 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 271
Query: 292 IPFIFDNALIHTFFSIGRYYRP 303
IPF+ D A IHT F++G + RP
Sbjct: 272 IPFMTDAASIHTLFNLGGFQRP 282
BLAST of MS028318 vs. ExPASy Swiss-Prot
Match:
Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 5.0e-48
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 0
Query: 83 SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
SRG P+S+LSA+SS L+GEQGSL LP+LP R +P+A +D S+R + +
Sbjct: 61 SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120
Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
KP+WWWRTLAC+PYLM L + TAY+L P LE D + L + G++ LP WF
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180
Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++ S ++PL Y G + M +W
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240
Query: 263 AVGFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
AV F Y+ +L IR +L G YA IPF+ D A I
Sbjct: 241 AVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269
BLAST of MS028318 vs. ExPASy Swiss-Prot
Match:
Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 5.8e-36
Identity = 83/212 (39.15%), Postives = 122/212 (57.55%), Query Frame = 0
Query: 84 RGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRDDS-YRTKLYSTVKTK 143
RG + +SA SS LSG Q L +P+LP + +S +P+A +D S +R + + K
Sbjct: 42 RGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSSGFR---FPPMTKK 101
Query: 144 PEWWWRTLACVPYLM----ALQMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFPML 203
P WWWRTL+C+PYL+ A + TAY+L P + + F + ++ LP W +
Sbjct: 102 PRWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWSLIA 161
Query: 204 YFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAV 263
YF +AY +VR K+WPHF RFHV +GML+E AL + S ++P Y G M +W
Sbjct: 162 YFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTA 221
Query: 264 GFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
FV++ + CIR +L+G YA +PF+ D A I
Sbjct: 222 FFVFLFTTIECIRCALVGMYADVPFVCDAAYI 248
BLAST of MS028318 vs. ExPASy TrEMBL
Match:
A0A6J1D3E6 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111016667 PE=3 SV=1)
HSP 1 Score: 612.1 bits (1577), Expect = 1.3e-171
Identity = 300/303 (99.01%), Postives = 302/303 (99.67%), Query Frame = 0
Query: 1 MVAGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
MV GAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG
Sbjct: 1 MVPGAPSIARLRSPNPLLPAAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGYANMG 60
Query: 61 RQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
R+LKLSIRNAKQESGQELTFFSSRGTP+SHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS
Sbjct: 61 RELKLSIRNAKQESGQELTFFSSRGTPISHLSAASSPHLSGEQGSLFHKLPLLPPRNSAS 120
Query: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL
Sbjct: 121 KSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLDIDNL 180
Query: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF
Sbjct: 181 IFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNF 240
Query: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY
Sbjct: 241 LPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSIGRYY 300
Query: 301 RPF 304
RPF
Sbjct: 301 RPF 303
BLAST of MS028318 vs. ExPASy TrEMBL
Match:
A0A6J1GL44 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)
HSP 1 Score: 453.4 bits (1165), Expect = 7.6e-124
Identity = 234/307 (76.22%), Postives = 258/307 (84.04%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M+A APS ARLR S NPLL A +TA SVR +DVVLK C KPSQV +PQC RL
Sbjct: 28 MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQ FRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 328 GRYFRPF 334
BLAST of MS028318 vs. ExPASy TrEMBL
Match:
A0A6J1GMA4 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)
HSP 1 Score: 453.4 bits (1165), Expect = 7.6e-124
Identity = 234/307 (76.22%), Postives = 258/307 (84.04%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M+A APS ARLR S NPLL A +TA SVR +DVVLK C KPSQV +PQC RL
Sbjct: 13 MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 72
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 73 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 132
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQ FRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 133 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 192
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 193 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 252
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 253 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 312
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 313 GRYFRPF 319
BLAST of MS028318 vs. ExPASy TrEMBL
Match:
A0A6J1HZ71 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)
HSP 1 Score: 452.2 bits (1162), Expect = 1.7e-123
Identity = 233/307 (75.90%), Postives = 258/307 (84.04%), Query Frame = 0
Query: 1 MVAGAP-SIARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M A AP S ARLR SPNPLL A +TA SVR +DVVLK C KPSQV +PQC RLG
Sbjct: 28 MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGC 87
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L L I N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88 ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQAFRDDSY K +S + KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLY NLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSL+GTYA+IPFI +NALIHTFFS
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 328 GRYFRPF 334
BLAST of MS028318 vs. ExPASy TrEMBL
Match:
A0A6J1GM78 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)
HSP 1 Score: 448.4 bits (1152), Expect = 2.4e-122
Identity = 234/307 (76.22%), Postives = 257/307 (83.71%), Query Frame = 0
Query: 1 MVAGAPSI-ARLR--SPNPLLP-AAAPPSTAVSVRCKDVVLKRCSKPSQVAMPQCPRLGY 60
M+A APS ARLR S NPLL A +TA SVR DVVLK C KPSQV +PQC RL
Sbjct: 28 MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVR--DVVLKGCFKPSQVVVPQCRRLDC 87
Query: 61 ANMGRQLKLSIRNAKQESGQELTFFSSRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPR 120
AN+G L LSI N KQE +EL F SSRG +SHLSAA+SP L GEQGSLFHKLPLLPPR
Sbjct: 88 ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147
Query: 121 NSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQMSNTAYYLLPLLEHLD 180
A KSPQ FRDDSY K +S V KPEWWWRTLACVPYLMALQMS+TAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207
Query: 181 IDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWC 240
+DNLIFYVPG+VQNLPWWFPMLYFNLAYFGVVRNK+ PHF+RFHVMMGMLL TAL+I+W
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267
Query: 241 TSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYARIPFIFDNALIHTFFSI 300
TSNF+PLIHYNGTY+MQYWAAVGF+YISIL +CIRSSLLGTYA+IPFI +NALIHTFFS
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327
Query: 301 GRYYRPF 304
GRY+RPF
Sbjct: 328 GRYFRPF 332
BLAST of MS028318 vs. TAIR 10
Match:
AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )
HSP 1 Score: 220.3 bits (560), Expect = 2.1e-57
Identity = 115/262 (43.89%), Postives = 165/262 (62.98%), Query Frame = 0
Query: 52 PRLGYANM--GRQLKLSIRNAKQESGQEL--------TFFSSRGTPMSHLSAASSPHLSG 111
PR+ + N+ +L+LS + + +E+ F++ T + L A P L+
Sbjct: 32 PRVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLA- 91
Query: 112 EQGSLFHKLPLLPPRNSASKSPQAFRDDSYRTKLYSTVKTKPEWWWRTLACVPYLMALQM 171
G H+ P+ P R +DD ++ KL + +PEWWWRTLACVPYL++LQ+
Sbjct: 92 -PGLRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQI 151
Query: 172 SNTAYYLLPLLE-HLDIDNLIFYVPGSVQNLPWWFPMLYFNLAYFGVVRNKDWPHFLRFH 231
S+ +Y+ P LE H I ++I+++PG++ P WF M+Y L Y VV+NK+ PH+LRFH
Sbjct: 152 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 211
Query: 232 VMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWAAVGFVYISILLVCIRSSLLGTYAR 291
+MMGMLLETAL ++WCTSNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+
Sbjct: 212 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 271
Query: 292 IPFIFDNALIHTFFSIGRYYRP 303
IPF+ D A IHT F++G + RP
Sbjct: 272 IPFMTDAASIHTLFNLGGFQRP 282
BLAST of MS028318 vs. TAIR 10
Match:
AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )
HSP 1 Score: 193.0 bits (489), Expect = 3.6e-49
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 0
Query: 83 SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
SRG P+S+LSA+SS L+GEQGSL LP+LP R +P+A +D S+R + +
Sbjct: 61 SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120
Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
KP+WWWRTLAC+PYLM L + TAY+L P LE D + L + G++ LP WF
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180
Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++ S ++PL Y G + M +W
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240
Query: 263 AVGFVYISILLVCIRSSLLGTYARIPFIFDNALI 291
AV F Y+ +L IR +L G YA IPF+ D A I
Sbjct: 241 AVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269
BLAST of MS028318 vs. TAIR 10
Match:
AT1G04945.3 (HIT-type Zinc finger family protein )
HSP 1 Score: 176.8 bits (447), Expect = 2.6e-44
Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 0
Query: 83 SRGTPMSHLSAASSPHLSGEQGSLFHKLPLLPPRNSASKSPQAFRD--DSYRTKLYSTVK 142
SRG P+S+LSA+SS L+GEQGSL LP+LP R +P+A +D S+R + +
Sbjct: 61 SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFR---FPPMT 120
Query: 143 TKPEWWWRTLACVPYLMAL----QMSNTAYYLLPLLEHLDIDNLIFYVPGSVQNLPWWFP 202
KP+WWWRTLAC+PYLM L + TAY+L P LE D + L + G++ LP WF
Sbjct: 121 KKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFL 180
Query: 203 MLYFNLAYFGVVRNKDWPHFLRFHVMMGMLLETALNIVWCTSNFLPLIHYNGTYAMQYWA 262
M YF +AY G+VR K+WPHF RFHV+MGMLLE AL ++ S ++PL Y G + M +W
Sbjct: 181 MAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWT 240
Query: 263 AVGFVYISILLVCIRSSL 275
AV F Y+ +L IR +L
Sbjct: 241 AVAFAYLFTVLESIRCAL 253
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022147822.1 | 2.6e-171 | 99.01 | protein TIC 20-IV, chloroplastic-like [Momordica charantia] | [more] |
| XP_038888476.1 | 6.2e-128 | 77.45 | protein TIC 20-IV, chloroplastic [Benincasa hispida] | [more] |
| XP_023554543.1 | 6.4e-125 | 77.20 | protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022952618.1 | 1.6e-123 | 76.22 | protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata] | [more] |
| XP_022952620.1 | 1.6e-123 | 76.22 | protein TIC 20-IV, chloroplastic-like isoform X3 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9ZQZ9 | 2.9e-56 | 43.89 | Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=... | [more] |
| Q8GZ79 | 5.0e-48 | 49.07 | Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ... | [more] |
| Q9ZST8 | 5.8e-36 | 39.15 | Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1D3E6 | 1.3e-171 | 99.01 | Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111016667 PE=3 SV=1 | [more] |
| A0A6J1GL44 | 7.6e-124 | 76.22 | Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1 | [more] |
| A0A6J1GMA4 | 7.6e-124 | 76.22 | Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1 | [more] |
| A0A6J1HZ71 | 1.7e-123 | 75.90 | Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1 | [more] |
| A0A6J1GM78 | 2.4e-122 | 76.22 | Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G03320.1 | 2.1e-57 | 43.89 | translocon at the inner envelope membrane of chloroplasts 20-IV | [more] |
| AT1G04940.1 | 3.6e-49 | 49.07 | translocon at the inner envelope membrane of chloroplasts 20 | [more] |
| AT1G04945.3 | 2.6e-44 | 48.48 | HIT-type Zinc finger family protein | [more] |
