MS028261 (gene) Bitter gourd (TR) v1

Overview


Name	MS028261
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold47: 1139668 .. 1139952 (-)
RNA-Seq Expression	MS028261
Synteny	MS028261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCAGGTTGTCCGGTATTACTCGTGCTAAGCAAGTCCATCGGCGATCTCCGTTGACTGGAAACCAAGCAGATTTGAAGGCTGCAGATGTTCCAAAGGGTGCTTTACAGTTTATGTTGGAGAGGGACAAAATTCCGATATCTTACTTGAACCAGCCTTTGTTTCAAGACTTGCTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCATGTAGTGAAGACTTTTTCCTTGATCTTACTTCTCAATTTAGAGCTTGA

mRNA sequence

ATGGGTTTCAGGTTGTCCGGTATTACTCGTGCTAAGCAAGTCCATCGGCGATCTCCGTTGACTGGAAACCAAGCAGATTTGAAGGCTGCAGATGTTCCAAAGGGTGCTTTACAGTTTATGTTGGAGAGGGACAAAATTCCGATATCTTACTTGAACCAGCCTTTGTTTCAAGACTTGCTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCATGTAGTGAAGACTTTTTCCTTGATCTTACTTCTCAATTTAGAGCTTGA

Coding sequence (CDS)

ATGGGTTTCAGGTTGTCCGGTATTACTCGTGCTAAGCAAGTCCATCGGCGATCTCCGTTGACTGGAAACCAAGCAGATTTGAAGGCTGCAGATGTTCCAAAGGGTGCTTTACAGTTTATGTTGGAGAGGGACAAAATTCCGATATCTTACTTGAACCAGCCTTTGTTTCAAGACTTGCTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCATGTAGTGAAGACTTTTTCCTTGATCTTACTTCTCAATTTAGAGCTTGA

Protein sequence

MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA

Homology

[Close]

BLAST of MS028261 vs. NCBI nr
Match: XP_022135927.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 3.8e-44
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 3   FRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ 62
           FRLSGITRAKQVH RSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ
Sbjct: 87  FRLSGITRAKQVHWRSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ 146

Query: 63  AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 95
           AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA
Sbjct: 147 AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 178

[Close]

BLAST of MS028261 vs. NCBI nr
Match: XP_022135742.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25
Identity = 64/94 (68.09%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFML-----ERDKIPISYLNQPL 60
          MGFRL  I  AKQ  RRS  TGN A  KA D+PKG     +     +R  IP+SYLNQPL
Sbjct: 1  MGFRLPSIVHAKQSLRRSTSTGNGASPKAVDIPKGYFTVYIGEEQKKRFVIPLSYLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLT 90
          FQDLLSQAEEEFGYDHPMGGITIPCSED FL+LT
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDTFLNLT 94

[Close]

BLAST of MS028261 vs. NCBI nr
Match: XP_022135745.1 (auxin-induced protein 15A-like [Momordica charantia])

HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25
Identity = 64/95 (67.37%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKG-----ALQFMLERDKIPISYLNQPL 60
          MGFRL  I  AKQ  RRSP TGN A  +AAD PKG     A +   +R  IP+SYLNQPL
Sbjct: 1  MGFRLPSIVHAKQSLRRSPSTGNGASPRAADFPKGYFTVYAGEGQKKRFVIPLSYLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          FQDLLSQAEEEFGY+HPMGGITIPCSE+ FL+LT+
Sbjct: 61 FQDLLSQAEEEFGYEHPMGGITIPCSEEIFLNLTN 95

[Close]

BLAST of MS028261 vs. NCBI nr
Match: PON93801.1 (Small auxin-up RNA [Trema orientale])

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-24
Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGAL------QFMLERDKIPISYLNQP 60
           MGFRL G+  AKQ+ +RS    NQ+ L AADVPKG L      +  ++R  IP+SYLN+P
Sbjct: 1   MGFRLPGVVSAKQIIKRSSANANQSALSAADVPKGYLAVYVGDEGKMKRFVIPVSYLNKP 60

Query: 61  LFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 95
            FQDLLSQAEEEFG+DHPMGG+TIPC ED F+DL S+  A
Sbjct: 61  QFQDLLSQAEEEFGFDHPMGGLTIPCREDAFIDLISRLNA 100

[Close]

BLAST of MS028261 vs. NCBI nr
Match: XP_042509443.1 (auxin-responsive protein SAUR22-like [Macadamia integrifolia])

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24
Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGAL-----QFMLERDKIPISYLNQPL 60
          MG RL G+  AKQ+ RRS L GN+ D    DVPKG L     +   +R  +P+SYLNQPL
Sbjct: 1  MGIRLPGMIHAKQILRRSLLGGNRLDTAVTDVPKGHLAVYVGETQKKRYVVPVSYLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTSQ 92
          FQDLLSQAEEEFG+DHPMGG+TIPC ED F+DLTS+
Sbjct: 61 FQDLLSQAEEEFGFDHPMGGLTIPCKEDTFVDLTSR 96

[Close]

BLAST of MS028261 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 55/94 (58.51%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQF----MLERDKIPISYLNQPLF 60
          MGFRL GI       R++ +  NQA  K+ +VPKG L       + R  IP+SYLNQP F
Sbjct: 1  MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          QDLL+QAEEEFGYDHPMGG+TIPC ED FL +TS
Sbjct: 61 QDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTS 87

[Close]

BLAST of MS028261 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-22
Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFM----LERDKIPISYLNQPLF 60
          MGFRL GI       R++    N+A  K  D PKG L       ++R  IP+S+LNQPLF
Sbjct: 1  MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          QDLLSQAEEEFGYDHPMGG+TIPCSED F  +TS
Sbjct: 61 QDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITS 87

[Close]

BLAST of MS028261 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 56/94 (59.57%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQF----MLERDKIPISYLNQPLF 60
          MGFRL GI +A                KAAD PKG L       L+R  IP+SYLNQP F
Sbjct: 1  MGFRLPGIRKAS---------------KAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          QDLLSQAEEEFGYDHPMGG+TIPCSED F  +TS
Sbjct: 61 QDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITS 79

[Close]

BLAST of MS028261 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.1e-21
Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQF----MLERDKIPISYLNQPLF 60
          MGFRL GI       R++  + NQA  KA DV KG L       + R  IP+SYLN+P F
Sbjct: 1  MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          QDLLSQAEEEFGY HP GG+TIPCSED F  +TS
Sbjct: 61 QDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITS 87

[Close]

BLAST of MS028261 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-20
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQF----MLERDKIPISYLNQPLF 60
          MGFR++GI       RR+     QA  K  DVPKG         + R  IP+SYLN+P F
Sbjct: 1  MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          Q+LLSQAEEEFGYDHPMGG+TIPC E+ FL++T+
Sbjct: 61 QELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTA 88

[Close]

BLAST of MS028261 vs. ExPASy TrEMBL
Match: A0A6J1C452 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007759 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 3   FRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ 62
           FRLSGITRAKQVH RSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ
Sbjct: 87  FRLSGITRAKQVHWRSPLTGNQADLKAADVPKGALQFMLERDKIPISYLNQPLFQDLLSQ 146

Query: 63  AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 95
           AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA
Sbjct: 147 AEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 178

[Close]

BLAST of MS028261 vs. ExPASy TrEMBL
Match: A0A6J1C1X1 (auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007634 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-25
Identity = 64/95 (67.37%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKG-----ALQFMLERDKIPISYLNQPL 60
          MGFRL  I  AKQ  RRSP TGN A  +AAD PKG     A +   +R  IP+SYLNQPL
Sbjct: 1  MGFRLPSIVHAKQSLRRSPSTGNGASPRAADFPKGYFTVYAGEGQKKRFVIPLSYLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          FQDLLSQAEEEFGY+HPMGGITIPCSE+ FL+LT+
Sbjct: 61 FQDLLSQAEEEFGYEHPMGGITIPCSEEIFLNLTN 95

[Close]

BLAST of MS028261 vs. ExPASy TrEMBL
Match: A0A6J1C3L5 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007632 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-25
Identity = 64/94 (68.09%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGALQFML-----ERDKIPISYLNQPL 60
          MGFRL  I  AKQ  RRS  TGN A  KA D+PKG     +     +R  IP+SYLNQPL
Sbjct: 1  MGFRLPSIVHAKQSLRRSTSTGNGASPKAVDIPKGYFTVYIGEEQKKRFVIPLSYLNQPL 60

Query: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLT 90
          FQDLLSQAEEEFGYDHPMGGITIPCSED FL+LT
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDTFLNLT 94

[Close]

BLAST of MS028261 vs. ExPASy TrEMBL
Match: A0A2P5F7Q0 (Small auxin-up RNA OS=Trema orientale OX=63057 GN=TorRG33x02_105040 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 7.3e-25
Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 1   MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGAL------QFMLERDKIPISYLNQP 60
           MGFRL G+  AKQ+ +RS    NQ+ L AADVPKG L      +  ++R  IP+SYLN+P
Sbjct: 1   MGFRLPGVVSAKQIIKRSSANANQSALSAADVPKGYLAVYVGDEGKMKRFVIPVSYLNKP 60

Query: 61  LFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 95
            FQDLLSQAEEEFG+DHPMGG+TIPC ED F+DL S+  A
Sbjct: 61  QFQDLLSQAEEEFGFDHPMGGLTIPCREDAFIDLISRLNA 100

[Close]

BLAST of MS028261 vs. ExPASy TrEMBL
Match: A0A2P5AT71 (Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302510 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MGFRLSGITRAKQVHRRSPLTGNQADLKAADVPKGAL------QFMLERDKIPISYLNQP 60
           MGFRL G+  AKQ+ +RS    NQ+ L AAD+PKG L      +  ++R  IP+SYLN+P
Sbjct: 1   MGFRLPGVVSAKQIIKRSSANANQSALSAADLPKGYLAVYVGDEGKMKRFVIPVSYLNKP 60

Query: 61  LFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTSQFRA 95
            FQDLLSQAEEEFG+DHPMGG+TIPC ED F+DL S   A
Sbjct: 61  QFQDLLSQAEEEFGFDHPMGGLTIPCKEDAFIDLISLLHA 100

[Close]

BLAST of MS028261 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 3.7e-21
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 11 AKQVHRRSPLTGNQADLKAADVPKGAL-----QFMLERDKIPISYLNQPLFQDLLSQAEE 70
          +KQ+ R++ L  + +   + DVPKG L     +  ++R  +P+SYL+QP FQDLL +AEE
Sbjct: 12 SKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEE 71

Query: 71 EFGYDHPMGGITIPCSEDFFLDLTSQF 93
          EFG+DHPMGG+TIPCSE+ F+DL S+F
Sbjct: 72 EFGFDHPMGGLTIPCSEEIFIDLASRF 98

[Close]

BLAST of MS028261 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19
Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 1  MGFRLSGITRAKQVHRRSPLTGNQADLKAA----DVPKGAL------QFMLERDKIPISY 60
          MG +L G+++AKQ  +RS L+   A L A     +VPKG +       +  +R  IPISY
Sbjct: 1  MGIQLIGLSQAKQKLQRS-LSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISY 60

Query: 61 LNQPLFQDLLSQAEEEFGYDHPMGGITIPCSEDFFLDLTS 91
          LN PLFQ LL+ AEEEFG+DHPMGG+TIPC+ED+F  L S
Sbjct: 61 LNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALAS 99

[Close]

BLAST of MS028261 vs. TAIR 10
Match: AT3G03850.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 33 PKGALQFML------ERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCSEDFFL 92
          PKG L   +      +R  +P+SYLNQPLFQDLLS+ EEEFG+DHPMGG+TIPC  D F+
Sbjct: 26 PKGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKCEEEFGFDHPMGGLTIPCPVDTFI 85

Query: 93 DLTSQFR 94
           +TSQ +
Sbjct: 86 SITSQLQ 92

[Close]

BLAST of MS028261 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-17
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 29 AADVPKGAL-----QFMLERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCSED 88
          A+  PKG L     +   +R  +PISYLNQP FQ LLS++EEEFG+DHPMGG+TIPC ED
Sbjct: 21 ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPED 80

Query: 89 FFLDLTSQFR 94
           F+++TS+F+
Sbjct: 81 TFINVTSRFQ 90

[Close]

BLAST of MS028261 vs. TAIR 10
Match: AT3G03820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.7 bits (208), Expect = 4.2e-17
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 28 KAADVPKGAL-------QFMLERDKIPISYLNQPLFQDLLSQAEEEFGYDHPMGGITIPC 87
          K    PKG L       Q   +R  +P+SYLNQPLFQ LL +AEEEFG++HPMGG+TIPC
Sbjct: 23 KETSAPKGFLAVYVGESQRKKQRHLVPVSYLNQPLFQALLIKAEEEFGFNHPMGGLTIPC 82

Query: 88 SEDFFLDLTSQFR 94
           ED FL +TSQ +
Sbjct: 83 PEDTFLTVTSQIQ 95

The following BLAST results are available for this feature:

BLAST of MS028261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135927.1	3.8e-44	98.91	indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]	[more]
XP_022135742.1	6.8e-25	68.09	indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]	[more]
XP_022135745.1	6.8e-25	67.37	auxin-induced protein 15A-like [Momordica charantia]	[more]
PON93801.1	1.5e-24	60.00	Small auxin-up RNA [Trema orientale]	[more]
XP_042509443.1	2.0e-24	62.50	auxin-responsive protein SAUR22-like [Macadamia integrifolia]	[more]

BLAST of MS028261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	1.5e-22	58.51	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	5.6e-22	58.51	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	3.6e-21	59.57	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	8.1e-21	57.45	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	2.3e-20	54.26	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of MS028261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C452	1.9e-44	98.91	indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1C1X1	3.3e-25	67.37	auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007634 PE...	[more]
A0A6J1C3L5	3.3e-25	68.09	indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN...	[more]
A0A2P5F7Q0	7.3e-25	60.00	Small auxin-up RNA OS=Trema orientale OX=63057 GN=TorRG33x02_105040 PE=3 SV=1	[more]
A0A2P5AT71	2.8e-24	59.00	Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_302510 PE=3 SV...	[more]

BLAST of MS028261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	3.7e-21	51.72	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	3.5e-19	52.00	SAUR-like auxin-responsive protein family	[more]
AT3G03850.1	1.9e-17	58.21	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.5e-17	57.14	SAUR-like auxin-responsive protein family	[more]
AT3G03820.1	4.2e-17	56.16	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 28..89 e-value: 6.5E-15 score: 55.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..93
None	No IPR available	PANTHER	PTHR31929:SF113	SAUR FAMILY PROTEIN	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028261.1	MS028261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin