![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS028179 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGGAAAATCTCGTCGTCGGCGCCGGTGTCCGCAACTTGGGGGAGACCGGCGGCGGCCCAATACTCCATTCCGGCGTCTGGGGCGCCTGCGAGAAACCCCAACTTCAAGTGCTGCGATGGGGCGCCTGAGGGGCTTTGCAGCGCATGCGTGTGCTGCGTGTGCTGCCCACTGGCTCTGGTGTGGGGATGCCTCAGGCTGCCATGGAGGGCCGCGAAGCAAGCCAAGAAATGGGTCGGCGGCGGATCTGAAGAGAAGCCGTTGGCGTATTCTTCCTTTTCTGACATTGATTCCAGCGGTGAAGTTTAG ATGGAGAGGAAAATCTCGTCGTCGGCGCCGGTGTCCGCAACTTGGGGGAGACCGGCGGCGGCCCAATACTCCATTCCGGCGTCTGGGGCGCCTGCGAGAAACCCCAACTTCAAGTGCTGCGATGGGGCGCCTGAGGGGCTTTGCAGCGCATGCGTGTGCTGCGTGTGCTGCCCACTGGCTCTGGTGTGGGGATGCCTCAGGCTGCCATGGAGGGCCGCGAAGCAAGCCAAGAAATGGGTCGGCGGCGGATCTGAAGAGAAGCCGTTGGCGTATTCTTCCTTTTCTGACATTGATTCCAGCGGTGAAGTTTAG ATGGAGAGGAAAATCTCGTCGTCGGCGCCGGTGTCCGCAACTTGGGGGAGACCGGCGGCGGCCCAATACTCCATTCCGGCGTCTGGGGCGCCTGCGAGAAACCCCAACTTCAAGTGCTGCGATGGGGCGCCTGAGGGGCTTTGCAGCGCATGCGTGTGCTGCGTGTGCTGCCCACTGGCTCTGGTGTGGGGATGCCTCAGGCTGCCATGGAGGGCCGCGAAGCAAGCCAAGAAATGGGTCGGCGGCGGATCTGAAGAGAAGCCGTTGGCGTATTCTTCCTTTTCTGACATTGATTCCAGCGGTGAAGTTTAG MERKISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLPWRAAKQAKKWVGGGSEEKPLAYSSFSDIDSSGEV Homology
BLAST of MS028179 vs. NCBI nr
Match: KAF3438596.1 (hypothetical protein FNV43_RR21359 [Rhamnella rubrinervis]) HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13 Identity = 52/107 (48.60%), Postives = 62/107 (57.94%), Query Frame = 0
BLAST of MS028179 vs. NCBI nr
Match: KAG6672932.1 (hypothetical protein I3842_16G083700 [Carya illinoinensis]) HSP 1 Score: 84.3 bits (207), Expect = 6.5e-13 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of MS028179 vs. NCBI nr
Match: XP_042964072.1 (uncharacterized protein LOC122298409 [Carya illinoinensis] >KAG2664592.1 hypothetical protein I3760_16G089100 [Carya illinoinensis] >KAG6625341.1 hypothetical protein CIPAW_16G089000 [Carya illinoinensis] >KAG7942146.1 hypothetical protein I3843_16G085000 [Carya illinoinensis]) HSP 1 Score: 84.3 bits (207), Expect = 6.5e-13 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of MS028179 vs. NCBI nr
Match: XP_030949871.1 (uncharacterized protein LOC115973770 [Quercus lobata]) HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MS028179 vs. NCBI nr
Match: XP_023927456.1 (uncharacterized protein LOC112038835 isoform X1 [Quercus suber] >XP_023927457.1 uncharacterized protein LOC112038835 isoform X2 [Quercus suber]) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MS028179 vs. ExPASy TrEMBL
Match: A0A2N9I0D5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45351 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.2e-13 Identity = 45/82 (54.88%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of MS028179 vs. ExPASy TrEMBL
Match: A0A7N2MNY9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.0e-12 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MS028179 vs. ExPASy TrEMBL
Match: A0A6A1VIT7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G001029 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.8e-12 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MS028179 vs. ExPASy TrEMBL
Match: A0A2P5AQX8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_308600 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.3e-10 Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of MS028179 vs. ExPASy TrEMBL
Match: A0A2P5FVU0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_021900 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.3e-10 Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of MS028179 vs. TAIR 10
Match: AT1G48745.1 (unknown protein; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 4.5e-04 Identity = 27/63 (42.86%), Postives = 35/63 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|