MS028111 (gene) Bitter gourd (TR) v1

Overview


Name	MS028111
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	(1->3)-beta-glucan endohydrolase
Location	scaffold208: 393344 .. 393664 (+)
RNA-Seq Expression	MS028111
Synteny	MS028111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCCACGGGAGTCTCGTACCCTCCCTTCGCTAGAGCATTCACCATCGCAGCTGCCAGACCTCTGAGCAACATCGCAAAGGTGGTGGGCGCTAGTGGTGTACCATTATTGCTGAACGTGTACCCATATTTCGTGTACACATCAAACCTACAACAAATCCCACTAAATTACACCCTCTTCACTTCCACGACGTCGGGAGTGGTGTATGGAAATCTGAACTACTATAATCTGTTTGATGTCATGGTGGATTCTTTCTATGAGGTGCTGGAGAAGATTGGTGCTGCCAGTGTGAGACTATACATTTCAAAGACTAGGTGA

mRNA sequence

ATGAGCGCCACGGGAGTCTCGTACCCTCCCTTCGCTAGAGCATTCACCATCGCAGCTGCCAGACCTCTGAGCAACATCGCAAAGGTGGTGGGCGCTAGTGGTGTACCATTATTGCTGAACGTGTACCCATATTTCGTGTACACATCAAACCTACAACAAATCCCACTAAATTACACCCTCTTCACTTCCACGACGTCGGGAGTGGTGTATGGAAATCTGAACTACTATAATCTGTTTGATGTCATGGTGGATTCTTTCTATGAGGTGCTGGAGAAGATTGGTGCTGCCAGTGTGAGACTATACATTTCAAAGACTAGGTGA

Coding sequence (CDS)

ATGAGCGCCACGGGAGTCTCGTACCCTCCCTTCGCTAGAGCATTCACCATCGCAGCTGCCAGACCTCTGAGCAACATCGCAAAGGTGGTGGGCGCTAGTGGTGTACCATTATTGCTGAACGTGTACCCATATTTCGTGTACACATCAAACCTACAACAAATCCCACTAAATTACACCCTCTTCACTTCCACGACGTCGGGAGTGGTGTATGGAAATCTGAACTACTATAATCTGTTTGATGTCATGGTGGATTCTTTCTATGAGGTGCTGGAGAAGATTGGTGCTGCCAGTGTGAGACTATACATTTCAAAGACTAGGTGA

Protein sequence

MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKTR

Homology

[Close]

BLAST of MS028111 vs. NCBI nr
Match: XP_022152305.1 (ribosomal protein S6 kinase alpha-5-like [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 4.6e-46
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           +SATGVSYPPFA AFTIAAARPLSNIAKVVGASGVPLLLNVYPYF YTSNLQQIPLNYTL
Sbjct: 730 ISATGVSYPPFAGAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFAYTSNLQQIPLNYTL 789

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKTR 107
           FTSTTSGVVYGNLNYYNLFDVMVDSFY VLEKI AA+VRLYISKTR
Sbjct: 790 FTSTTSGVVYGNLNYYNLFDVMVDSFYAVLEKISAATVRLYISKTR 835

[Close]

BLAST of MS028111 vs. NCBI nr
Match: XP_022152302.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 3.1e-34
Identity = 81/105 (77.14%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M A GVSYPP A  FT+AAA PLS+IAKVVG+SG PLLLNVYPYF Y S+ QQIPLNY L
Sbjct: 162 MGAMGVSYPPSAGVFTVAAAGPLSDIAKVVGSSGTPLLLNVYPYFAYASSPQQIPLNYAL 221

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT GVV GNLNYYNLFD MVDSFY  LEKI AA+VRL IS+T
Sbjct: 222 FTSTTPGVVDGNLNYYNLFDAMVDSFYAALEKIDAANVRLEISET 266

[Close]

BLAST of MS028111 vs. NCBI nr
Match: XP_022135630.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 3.4e-33
Identity = 81/105 (77.14%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MS  GVSYPP   AFT AAA PLS IAKVVG+SG PLLLNVYPYF Y SN QQIPLNY L
Sbjct: 152 MSVIGVSYPPSTGAFTDAAAGPLSEIAKVVGSSGAPLLLNVYPYFAYASNPQQIPLNYAL 211

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT  VV GNLNYYNLFD MVDSFY  LEKIGA  VRL IS+T
Sbjct: 212 FTSTTPVVVDGNLNYYNLFDAMVDSFYAALEKIGAVDVRLEISET 256

[Close]

BLAST of MS028111 vs. NCBI nr
Match: XP_022141986.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia])

HSP 1 Score: 141.7 bits (356), Expect = 3.5e-30
Identity = 77/105 (73.33%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MSA GVSYPP A  FT  A  PLSNIAKVVG+SG PLLLNVYPYF Y SN QQI LNY L
Sbjct: 162 MSAMGVSYPPSAGTFTAVALGPLSNIAKVVGSSGAPLLLNVYPYFAYASNPQQISLNYAL 221

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT  +V GNL+YYNLFD MVDSFY  LEKIGA +V L IS+T
Sbjct: 222 FTSTTP-IVDGNLHYYNLFDAMVDSFYAALEKIGATNVTLEISET 265

[Close]

BLAST of MS028111 vs. NCBI nr
Match: XP_023536560.1 (probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 68/105 (64.76%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+   VSYPP A AF+  A  PL +I +V+G SG PLLLNVYPYF Y SN QQI L+Y L
Sbjct: 163 MTPLEVSYPPSAGAFSATAIGPLKDITRVLGTSGAPLLLNVYPYFAYASNPQQISLDYAL 222

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT  VV GNL Y+NLFD MVDSFY  LEKIGA  VR+ IS+T
Sbjct: 223 FTSTTPVVVDGNLQYFNLFDAMVDSFYSALEKIGAEGVRIDISET 267

[Close]

BLAST of MS028111 vs. ExPASy Swiss-Prot
Match: O22317 (Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 5.5e-18
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 5   GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTST 64
           G SYPP A AF+ AA   LS I + + ++G PLL+NVYPYF YT N  QI L Y LFT++
Sbjct: 165 GTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTAS 224

Query: 65  TSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
              V  G  +Y NLFD +VD+ +  LE++G A+V + +S++
Sbjct: 225 GVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSES 265

[Close]

BLAST of MS028111 vs. ExPASy Swiss-Prot
Match: A7PQW3 (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-14
Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 5   GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTST 64
           G SYPP   +F+   +  ++ I   +  +G PLL N+YPYF YT + Q I L+Y LFT++
Sbjct: 169 GKSYPPSEGSFSDDVSSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTAS 228

Query: 65  TSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
              V  G+  Y NLFD ++D+ Y  LEK G +++++ +S++
Sbjct: 229 GVVVQDGSYQYQNLFDALLDALYAALEKAGGSNLKIVVSES 269

[Close]

BLAST of MS028111 vs. ExPASy Swiss-Prot
Match: P52408 (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica OX=3760 GN=GNS1 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 5   GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTST 64
           G ++PP   +F       L  I + + +   PLL+N+YPYF Y+ N Q I L+Y LFT+ 
Sbjct: 175 GETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYALFTAP 234

Query: 65  TSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           +  V  GN  Y NLFD M+D  Y  LEK G  S+++ IS+T
Sbjct: 235 SVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSLKVVISET 275

[Close]

BLAST of MS028111 vs. ExPASy Swiss-Prot
Match: P23431 (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia OX=4092 GN=GN2 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-13
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+  G SYPP   +F   A   +  I   +  +  PLL+N+YPYF Y+ N  QI L Y+L
Sbjct: 170 MTLIGNSYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSL 229

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FT+    V  G+  Y NLFD M+DS Y  LE+ G ASV + +S++
Sbjct: 230 FTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSES 274

[Close]

BLAST of MS028111 vs. ExPASy Swiss-Prot
Match: P23546 (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-13
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+  G SYPP   +F   A   +  I   +  +  PLL+N+YPYF Y+ N  QI L Y+L
Sbjct: 170 MTLIGNSYPPSQGSFRNDARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSL 229

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FT+    V  G+  Y NLFD M+DS Y  LE+ G ASV + +S++
Sbjct: 230 FTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSES 274

[Close]

BLAST of MS028111 vs. ExPASy TrEMBL
Match: A0A6J1DDK5 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111020053 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           +SATGVSYPPFA AFTIAAARPLSNIAKVVGASGVPLLLNVYPYF YTSNLQQIPLNYTL
Sbjct: 730 ISATGVSYPPFAGAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFAYTSNLQQIPLNYTL 789

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKTR 107
           FTSTTSGVVYGNLNYYNLFDVMVDSFY VLEKI AA+VRLYISKTR
Sbjct: 790 FTSTTSGVVYGNLNYYNLFDVMVDSFYAVLEKISAATVRLYISKTR 835

[Close]

BLAST of MS028111 vs. ExPASy TrEMBL
Match: A0A6J1DFU0 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111020050 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 81/105 (77.14%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M A GVSYPP A  FT+AAA PLS+IAKVVG+SG PLLLNVYPYF Y S+ QQIPLNY L
Sbjct: 162 MGAMGVSYPPSAGVFTVAAAGPLSDIAKVVGSSGTPLLLNVYPYFAYASSPQQIPLNYAL 221

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT GVV GNLNYYNLFD MVDSFY  LEKI AA+VRL IS+T
Sbjct: 222 FTSTTPGVVDGNLNYYNLFDAMVDSFYAALEKIDAANVRLEISET 266

[Close]

BLAST of MS028111 vs. ExPASy TrEMBL
Match: A0A6J1C1J7 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111007535 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 81/105 (77.14%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MS  GVSYPP   AFT AAA PLS IAKVVG+SG PLLLNVYPYF Y SN QQIPLNY L
Sbjct: 152 MSVIGVSYPPSTGAFTDAAAGPLSEIAKVVGSSGAPLLLNVYPYFAYASNPQQIPLNYAL 211

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT  VV GNLNYYNLFD MVDSFY  LEKIGA  VRL IS+T
Sbjct: 212 FTSTTPVVVDGNLNYYNLFDAMVDSFYAALEKIGAVDVRLEISET 256

[Close]

BLAST of MS028111 vs. ExPASy TrEMBL
Match: A0A6J1CKU8 ((1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111012224 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-30
Identity = 77/105 (73.33%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MSA GVSYPP A  FT  A  PLSNIAKVVG+SG PLLLNVYPYF Y SN QQI LNY L
Sbjct: 162 MSAMGVSYPPSAGTFTAVALGPLSNIAKVVGSSGAPLLLNVYPYFAYASNPQQISLNYAL 221

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTSTT  +V GNL+YYNLFD MVDSFY  LEKIGA +V L IS+T
Sbjct: 222 FTSTTP-IVDGNLHYYNLFDAMVDSFYAALEKIGATNVTLEISET 265

[Close]

BLAST of MS028111 vs. ExPASy TrEMBL
Match: A0A0A0L3A5 ((1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G377200 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+A GVSYPP A AFT +AA  + +IA V+G+SG P+L+NVYPYF Y SN QQI LNY L
Sbjct: 162 MTALGVSYPPSAGAFTGSAAGIMKDIANVLGSSGAPILVNVYPYFAYASNPQQISLNYAL 221

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           FTS+T  VV GNL Y+NLFD MVDSFY  LEKI A  +R+ IS+T
Sbjct: 222 FTSSTPVVVDGNLQYFNLFDAMVDSFYAALEKIDAGEIRIGISET 266

[Close]

BLAST of MS028111 vs. TAIR 10
Match: AT1G77780.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-15
Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 2   SATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLF 61
           +A   SYPP A  F  A    ++ I  ++ ++  PL++NVYPYF Y S+   + L Y  F
Sbjct: 154 AALANSYPPSAGVFKPAITELITEIVSILSSTDSPLMVNVYPYFAYASDPSHVSLEYATF 213

Query: 62  TSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
            ST+  V  G   Y N+FD  +D+F   LEKI   SV++Y+++T
Sbjct: 214 RSTSPVVTDGKYQYTNIFDATLDAFNVALEKINHGSVKVYVAET 257

[Close]

BLAST of MS028111 vs. TAIR 10
Match: AT1G77790.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 7.6e-15
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+A   +YPP A  F       ++ I  ++  +  PL+ N+YPYF Y S+   I L+Y  
Sbjct: 160 MTALTNTYPPSAATFLPDLTEIMTEITSILSETNSPLMTNIYPYFAYASDPYHISLDYAS 219

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           F S T  V+ G+L Y N+F+ MVD F   LEKI AA+V + +++T
Sbjct: 220 FKSNTPVVIDGDLYYNNMFEAMVDGFNAALEKINAANVVVMVAET 264

[Close]

BLAST of MS028111 vs. TAIR 10
Match: AT1G33220.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-14
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MS    SYPP A  FT  A   L  + K++  +  P+L+N+YPYF Y S+   IPL+Y  
Sbjct: 164 MSNLEQSYPPSAGEFTSQAREQLVPVLKLLSQTSTPILVNIYPYFPYASDPTNIPLDYAT 223

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           F +  + V  G L Y N+FD + D+F   +EK G   + + +S+T
Sbjct: 224 FNTKATVVQDGPLGYSNMFDAIFDAFVWAMEKEGVKDLPMVVSET 268

[Close]

BLAST of MS028111 vs. TAIR 10
Match: AT5G20330.1 (beta-1,3-glucanase 4 )

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-13
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           MS    SYPP A  FT  A   L  + K++  +  P+L+N+YPYF Y S+   I L+Y  
Sbjct: 164 MSNLEQSYPPSAGMFTSQAREQLVPVLKLLSQTSTPILVNIYPYFAYASDPANIRLDYAS 223

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           F + +  V  G+L Y N+FD + D+F   +EK G  ++ + +S+T
Sbjct: 224 FNTKSIVVQDGSLGYSNMFDAIFDAFVWAMEKEGVKNLPMVVSET 268

[Close]

BLAST of MS028111 vs. TAIR 10
Match: AT5G20390.1 (Glycosyl hydrolase superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 9.3e-13
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 1   MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTL 60
           M+  G SYPP A  F   A   L+ + K +  +  P+L+N+YPYF Y ++   I L+Y +
Sbjct: 163 MTNLGQSYPPSAGDFMPQAREQLTPVLKFLSQTNTPILVNIYPYFAYAADPINIQLDYAI 222

Query: 61  FTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKT 106
           F +    V  G L Y N+FDV+ D+F   +EK G   + + +++T
Sbjct: 223 FNTNKVVVQDGPLGYTNMFDVIFDAFVWAMEKEGVKDLPMVVTET 267

The following BLAST results are available for this feature:

BLAST of MS028111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152305.1	4.6e-46	94.34	ribosomal protein S6 kinase alpha-5-like [Momordica charantia]	[more]
XP_022152302.1	3.1e-34	77.14	probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]	[more]
XP_022135630.1	3.4e-33	77.14	probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]	[more]
XP_022141986.1	3.5e-30	73.33	probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]	[more]
XP_023536560.1	2.4e-26	64.76	probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS028111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22317	5.5e-18	47.52	Glucan endo-1,3-beta-glucosidase OS=Musa acuminata OX=4641 GN=BANGLUC PE=1 SV=2	[more]
A7PQW3	4.8e-14	38.61	Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00120...	[more]
P52408	1.8e-13	41.58	Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica OX=3760 GN=GNS...	[more]
P23431	7.0e-13	41.90	Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbagini...	[more]
P23546	7.0e-13	41.90	Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tab...	[more]

BLAST of MS028111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDK5	2.2e-46	94.34	(1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111020053 ...	[more]
A0A6J1DFU0	1.5e-34	77.14	(1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111020050 ...	[more]
A0A6J1C1J7	1.7e-33	77.14	(1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111007535 ...	[more]
A0A6J1CKU8	1.7e-30	73.33	(1->3)-beta-glucan endohydrolase OS=Momordica charantia OX=3673 GN=LOC111012224 ...	[more]
A0A0A0L3A5	1.5e-26	63.81	(1->3)-beta-glucan endohydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G377200 PE=3...	[more]

BLAST of MS028111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77780.1	2.6e-15	38.46	Glycosyl hydrolase superfamily protein	[more]
AT1G77790.1	7.6e-15	39.05	Glycosyl hydrolase superfamily protein	[more]
AT1G33220.1	3.8e-14	38.10	Glycosyl hydrolase superfamily protein	[more]
AT5G20330.1	1.9e-13	37.14	beta-1,3-glucanase 4	[more]
AT5G20390.1	9.3e-13	35.24	Glycosyl hydrolase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000490	Glycoside hydrolase family 17	PFAM	PF00332	Glyco_hydro_17	coord: 3..105 e-value: 2.8E-19 score: 69.9
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 1..106 e-value: 6.4E-24 score: 86.5
None	No IPR available	PANTHER	PTHR32227:SF313	PUTATIVE-RELATED	coord: 2..105
IPR044965	Glycoside hydrolase family 17, plant	PANTHER	PTHR32227	GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED	coord: 2..105
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 4..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028111.1	MS028111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds