MS028044 (gene) Bitter gourd (TR) v1

Overview
NameMS028044
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold192: 68357 .. 69395 (+)
RNA-Seq ExpressionMS028044
SyntenyMS028044
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTGAACGAATTTTGTGTTCTTTCTTGTGGAATGGGCGCCAAAGCGGGCGGTCAGGGGCTAAGATGGCTTGGTCTGAGGTGTGTATTCCTTTGTGGGAGGGTGGTTTGAGTGTGCATCACTTGACCTCTTGGAATTATGACACTATAATGAAGCTGCTCTAGCTTCTGTTTACACGGGCTGACTCTCTTTGGGTGGCTTGGTTGGAGGCTATTCTTCGAGGGGATTGTATTTGGACCGTTCATGCTTCACCTCAGTTCTCTTGGTGTTGGCGGGATATTCTTTTTGTCTGAGATGTTTTTCGGCCTCTGGTTCGGTTTGCTATTGGAGATGGTCAGCGTTGTTTTGTGTGGTATGACATCTGGCTTCTGGGGGGTCCGATTTATTCGAGGTTTGGTGAATTCGATTATTTATAATGTTGCAAGCTCGTCCCAGGTGAAGGTTGCTTATTTTCTGTTTCCTGATGGTTTGTGGCGCTTGCCTCGGGGGTCAGCTGATCTTCGGCAACTGGTCTCTAAGGTTTCATCTGTGCAAGTTTTAGTTTGGAAGGTTGATGTGCCCATTTGAATTTCGACGTCGTCGGGTCTCTTCTCGGTGTCGAGTGTGTGAGGTGTGTCATGCCCGGCCCCGCCTCCCATTCCTTGGTTTTCTTTGCTTTGGTTCAATGGGAACATTATGAAGCATTCTTTCATTGCTTGGTTGGCAGTGCGTGATCGGCTTGATACGAGAGATCACTTATGTCGTTTGGATTCTTCTATTCCTGCTTCCTGTACGTTTTGTGCTGCCTTGGAGACCCAAGATCATCTATTCTTTGAGTGCACATTGGTCATTGCTTGAGCTGGTTCTTCTCACAGGATTTCATATTGGTCTACTGAGCTTGCTTTGGTTTCTCACATTAGTGCCGGGAAGTCTGCTCGTCGTCATGTGTGGTGCTTGGCATGAATTTCGACTGTTTCTTTTTTCTGGAGGGAGCGTAATGTTAGAGTTCATGCGGGTGGGGATGGTCGGTCGCCTTCTGTCCTTTTACGCGCATTGA

mRNA sequence

ATGATGTTGAACGAATTTTGTGTTCTTTCTTGTGGAATGGGCGCCAAAGCGGGCGGTCAGGGGCTAAGATGGCTTGGTCTGAGCTGCTCTAGCTTCTGTTTACACGGGCTGACTCTCTTTGGGTGGCTTGGTTGGAGGCTATTCTTCGAGGGGATTGTATTTGGACCGTTCATGCTTCACCTCAGTTCTCTTGGTGTTGGCGGGATATTCTTTTTGTCTGAGATGTTTTTCGGCCTCTGGTTCGGTTTGCTATTGGAGATGGTCAGCGTTGTTTTGTGTGGTATGACATCTGGCTTCTGGGGGGTCCGATTTATTCGAGGTTTGGTGAATTCGATTATTTATAATGTTGCAAGCTCGTCCCAGGTGAAGGTTGCTTATTTTCTGTTTCCTGATGGTTTGTGGCGCTTGCCTCGGGGGTCAGCTGATCTTCGGCAACTGTGCGTGATCGGCTTGATACGAGAGATCACTTATGTCGTTTGGATTCTTCTATTCCTGCTTCCTGTACGTTTTGTGCTGCCTTGGAGACCCAAGATCATCTATTCTTTGAGTGCACATTGGTCATTGCTTGAGCTGGTTCTTCTCACAGGATTTCATATTGGTCTACTGAGCTTGCTTTGGTTTCTCACATTAGTGCCGGGAAGTCTGCTCGTCGTCATGTGTGGTGCTTGGCATGAATTTCGACTGTTTCTTTTTTCTGGAGGGAGCGTAATGTTAGAGTTCATGCGGGTGGGGATGGTCGGTCGCCTTCTGTCCTTTTACGCGCATTGA

Coding sequence (CDS)

ATGATGTTGAACGAATTTTGTGTTCTTTCTTGTGGAATGGGCGCCAAAGCGGGCGGTCAGGGGCTAAGATGGCTTGGTCTGAGCTGCTCTAGCTTCTGTTTACACGGGCTGACTCTCTTTGGGTGGCTTGGTTGGAGGCTATTCTTCGAGGGGATTGTATTTGGACCGTTCATGCTTCACCTCAGTTCTCTTGGTGTTGGCGGGATATTCTTTTTGTCTGAGATGTTTTTCGGCCTCTGGTTCGGTTTGCTATTGGAGATGGTCAGCGTTGTTTTGTGTGGTATGACATCTGGCTTCTGGGGGGTCCGATTTATTCGAGGTTTGGTGAATTCGATTATTTATAATGTTGCAAGCTCGTCCCAGGTGAAGGTTGCTTATTTTCTGTTTCCTGATGGTTTGTGGCGCTTGCCTCGGGGGTCAGCTGATCTTCGGCAACTGTGCGTGATCGGCTTGATACGAGAGATCACTTATGTCGTTTGGATTCTTCTATTCCTGCTTCCTGTACGTTTTGTGCTGCCTTGGAGACCCAAGATCATCTATTCTTTGAGTGCACATTGGTCATTGCTTGAGCTGGTTCTTCTCACAGGATTTCATATTGGTCTACTGAGCTTGCTTTGGTTTCTCACATTAGTGCCGGGAAGTCTGCTCGTCGTCATGTGTGGTGCTTGGCATGAATTTCGACTGTTTCTTTTTTCTGGAGGGAGCGTAATGTTAGAGTTCATGCGGGTGGGGATGGTCGGTCGCCTTCTGTCCTTTTACGCGCATTGA

Protein sequence

MMLNEFCVLSCGMGAKAGGQGLRWLGLSCSSFCLHGLTLFGWLGWRLFFEGIVFGPFMLHLSSLGVGGIFFLSEMFFGLWFGLLLEMVSVVLCGMTSGFWGVRFIRGLVNSIIYNVASSSQVKVAYFLFPDGLWRLPRGSADLRQLCVIGLIREITYVVWILLFLLPVRFVLPWRPKIIYSLSAHWSLLELVLLTGFHIGLLSLLWFLTLVPGSLLVVMCGAWHEFRLFLFSGGSVMLEFMRVGMVGRLLSFYAH
Homology
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BLAST of MS028044 vs. ExPASy TrEMBL
Match: A0A6J1D875 (uncharacterized protein LOC111017811 OS=Momordica charantia OX=3673 GN=LOC111017811 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.6e-04
Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 59  LHLSSLGVGG-IFFLSEMFFGLWFGLLLEMVSVVLCGMTSGFW 101
           L++  L VGG IFFLSEM F LWF L LEMVSVVL GMT GFW
Sbjct: 184 LYMGWLYVGGLIFFLSEMLFDLWFDLRLEMVSVVLFGMTLGFW 226

The following BLAST results are available for this feature:
BLAST of MS028044 vs.
Match NameE-valueIdentityDescription
BLAST of MS028044 vs.
Match NameE-valueIdentityDescription
BLAST of MS028044 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D8756.6e-0472.09uncharacterized protein LOC111017811 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
BLAST of MS028044 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS028044.1MS028044.1mRNA