MS028021 (gene) Bitter gourd (TR) v1

Overview
NameMS028021
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Locationscaffold290: 591247 .. 592028 (+)
RNA-Seq ExpressionMS028021
SyntenyMS028021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGACCAACGGTGGACATCAATCCGTGCCAAGATACTTGCGAATTTGATAATTGAACGAGTGCTGAGAGGAAGGAAAGAATTGGAATGGAAGCTTATATGTGATGAGTTCTGCAGGAAAACAAGTATGACATGGGATGTAGAACAACTGAAGAACCAATATGCTGTTATGAGAAAGCAGTACCTAATTGTGCAGTCGATGTTTCATCGGGACGACTTCTCGTGGCGTGGAAATACCGGGATTATTGTGGCCACAGATGATAGGTGGGCCAAAATTGCTAGGGTATGTTCTTTTATGATCTCTAAAACTCAGATAATTGTGATAGCTCTACAACAGAGACTATAACTCTTTATTATTATGATGGCTTATTTGTCCAAAAAGCAGGTAACGATGAATTGTCCAACATATGAAGAGTTATGCATAATGTTCTCCAATTTTGATGGTAAGTTGGTCACTGATCGACTTTGATTTCAAACTCAAGCATTCCTGCCTACTAAACCTAATGGGAGTGATCATTTACAGATGGTCAAGAAATTACGAGTCAACCTACCAAACCCAATTCATCAAATAGTCACAAAAGAGGGAGGAAGTCAGACGAAGATGCAACATATAAAATAGCAGATTGTATTAAAGGATTGGATGAAATTGATGAAATGCATGGACTTGAAGAAGGTGTTTATTTTGGAGCTTTGGTACTGTTCAATGAACCAAATGCCAGAGAGACCTTCCTTTGTCTCAAGGAAGATAAACGCTATAACTGGCTGCAGAGGAACTGTTGA

mRNA sequence

ATGAGTGACCAACGGTGGACATCAATCCGTGCCAAGATACTTGCGAATTTGATAATTGAACGAGTGCTGAGAGGAAGGAAAGAATTGGAATGGAAGCTTATATGTGATGAGTTCTGCAGGAAAACAAGTATGACATGGGATGTAGAACAACTGAAGAACCAATATGCTGTTATGAGAAAGCAGTACCTAATTGTGCAGTCGATGTTTCATCGGGACGACTTCTCGTGGCGTGGAAATACCGGGATTATTGTGGCCACAGATGATAGGTGGGCCAAAATTGCTAGGGTAACGATGAATTGTCCAACATATGAAGAGTTATGCATAATGTTCTCCAATTTTGATGATGGTCAAGAAATTACGAGTCAACCTACCAAACCCAATTCATCAAATAGTCACAAAAGAGGGAGGAAGTCAGACGAAGATGCAACATATAAAATAGCAGATTGTATTAAAGGATTGGATGAAATTGATGAAATGCATGGACTTGAAGAAGGTGTTTATTTTGGAGCTTTGGTACTGTTCAATGAACCAAATGCCAGAGAGACCTTCCTTTGTCTCAAGGAAGATAAACGCTATAACTGGCTGCAGAGGAACTGTTGA

Coding sequence (CDS)

ATGAGTGACCAACGGTGGACATCAATCCGTGCCAAGATACTTGCGAATTTGATAATTGAACGAGTGCTGAGAGGAAGGAAAGAATTGGAATGGAAGCTTATATGTGATGAGTTCTGCAGGAAAACAAGTATGACATGGGATGTAGAACAACTGAAGAACCAATATGCTGTTATGAGAAAGCAGTACCTAATTGTGCAGTCGATGTTTCATCGGGACGACTTCTCGTGGCGTGGAAATACCGGGATTATTGTGGCCACAGATGATAGGTGGGCCAAAATTGCTAGGGTAACGATGAATTGTCCAACATATGAAGAGTTATGCATAATGTTCTCCAATTTTGATGATGGTCAAGAAATTACGAGTCAACCTACCAAACCCAATTCATCAAATAGTCACAAAAGAGGGAGGAAGTCAGACGAAGATGCAACATATAAAATAGCAGATTGTATTAAAGGATTGGATGAAATTGATGAAATGCATGGACTTGAAGAAGGTGTTTATTTTGGAGCTTTGGTACTGTTCAATGAACCAAATGCCAGAGAGACCTTCCTTTGTCTCAAGGAAGATAAACGCTATAACTGGCTGCAGAGGAACTGTTGA

Protein sequence

MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIARVTMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGRKSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
Homology
BLAST of MS028021 vs. NCBI nr
Match: XP_022145264.1 (uncharacterized protein LOC111014759 isoform X1 [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 3.7e-65
Identity = 140/215 (65.12%), Postives = 157/215 (73.02%), Query Frame = 0

Query: 1   MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRK 60
           M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRK
Sbjct: 18  MTDLMWTSNIAKILVELIIEQVQRGRKELEWGFICDEFCSRSKLMWDEEQLKHQYAVMRK 77

Query: 61  QYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARVTMNCPTYEELCIMFSNFDDG 120
           QYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   + +   TYE+LC +FSN D G
Sbjct: 78  QYLIVKSIFDRDDFSWHESTGIIVATVATDDARFIEEENLYL---TYEDLCRIFSNSDGG 137

Query: 121 QEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLE 180
           QE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLE
Sbjct: 138 QE-TSQPTKPNSSNSRKRGRKSGDDATYTMAGKKSGEDATYTIADCIKRLDEIAKMHGLE 197

Query: 181 EGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRN 199
           E +YFGALVLF EPN RETFL LK DK  NWLQRN
Sbjct: 198 EDIYFGALVLFKEPNVRETFLSLKVDKCCNWLQRN 228

BLAST of MS028021 vs. NCBI nr
Match: XP_022145265.1 (uncharacterized protein LOC111014759 isoform X2 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-60
Identity = 132/204 (64.71%), Postives = 149/204 (73.04%), Query Frame = 0

Query: 1   MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRK 60
           M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRK
Sbjct: 18  MTDLMWTSNIAKILVELIIEQVQRGRKELEWGFICDEFCSRSKLMWDEEQLKHQYAVMRK 77

Query: 61  QYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARVTMNCPTYEELCIMFSNFDDG 120
           QYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   + +   TYE+LC +FSN D G
Sbjct: 78  QYLIVKSIFDRDDFSWHESTGIIVATVATDDARFIEEENLYL---TYEDLCRIFSNSDGG 137

Query: 121 QEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLE 180
           QE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLE
Sbjct: 138 QE-TSQPTKPNSSNSRKRGRKSGDDATYTMAGKKSGEDATYTIADCIKRLDEIAKMHGLE 197

Query: 181 EGVYFGALVLFNEPNARETFLCLK 188
           E +YFGALVLF EPN RETFL LK
Sbjct: 198 EDIYFGALVLFKEPNVRETFLSLK 217

BLAST of MS028021 vs. NCBI nr
Match: EOX90801.1 (Radiation sensitive 17, putative [Theobroma cacao])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39
Identity = 103/279 (36.92%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 2   SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQY 61
           S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y
Sbjct: 674 SRARWTTFLTKILADLLVEQVHRGNRQNSSFSKKAWKSMCDDFCKKTSLKWDKEQLKNRY 733

Query: 62  AVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELC 121
            V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +         T  CP Y++LC
Sbjct: 734 GVLRRQYVLVKSLLDQTDFSWNESTGDVIGNDEAWAEFIKGHPDAETIKTSGCPIYKQLC 793

Query: 122 IMFS-------------------------------------------NFDDGQEITSQPT 181
            +FS                                           +  D Q+ T QP+
Sbjct: 794 TIFSEPTTNGKHDYSAELGGDVPSSLPSLEPLSTIQEESSSESEEAEDVADDQDDTVQPS 853

Query: 182 KPNSSNSHKRGRKSDED------------------------ATYKIADCIKGLDEIDEMH 200
            P    + KRGRK  +D                        A Y IA CIK   E+DE+ 
Sbjct: 854 APGI--NRKRGRKGIDDAIAAAILEMAAASKLRTAAVRQSKARYSIASCIK---ELDELQ 913

BLAST of MS028021 vs. NCBI nr
Match: XP_017977880.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Theobroma cacao])

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-39
Identity = 102/279 (36.56%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 2   SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQY 61
           S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y
Sbjct: 21  SRARWTTFLTKILADLLVEQVHRGNRQNSSFSKKAWKSMCDDFCKKTSLKWDKEQLKNRY 80

Query: 62  AVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELC 121
            V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +         T  CP Y++LC
Sbjct: 81  GVLRRQYVLVKSLLDQTDFSWNESTGDVIGNDEAWAEFIKGHPDAETIKTSGCPIYKQLC 140

Query: 122 IMFS-------------------------------------------NFDDGQEITSQPT 181
            +FS                                           +  D Q+ T QP+
Sbjct: 141 TIFSEPTTNGKHDYSAELGGDVPSSLPSLEPLSTIQEESSSESEEAEDVADDQDDTVQPS 200

Query: 182 KPNSSNSHKRGRKSDED------------------------ATYKIADCIKGLDEIDEMH 200
            P    + KRGRK  +D                        A Y IA CIK   E++E+ 
Sbjct: 201 APGI--NRKRGRKGIDDAIAAAILEMAAASKLRTAAVRQSKARYSIASCIK---ELNELQ 260

BLAST of MS028021 vs. NCBI nr
Match: KAF3974668.1 (hypothetical protein CMV_002013 [Castanea mollissima])

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-36
Identity = 100/273 (36.63%), Postives = 136/273 (49.82%), Query Frame = 0

Query: 5   RWTSIRAKILANLIIERVLRGRKELE------WKLICDEFCRKTSMTWDVEQLKNQYAVM 64
           RWT+   KILA+L+I +V +G ++        W+ I DEF +KT + WD EQLKN+YAV+
Sbjct: 40  RWTTSLTKILADLMIHQVQKGNRQKNSFSKKAWRYISDEFYKKTGLKWDKEQLKNRYAVL 99

Query: 65  RKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELCIMF 124
           R+QY+ V+S+  + DFSW   TG I+A D+ W +  R            CP Y+ELC++F
Sbjct: 100 RRQYVTVKSLLDQSDFSWDEFTGTIIAKDEAWTEYIRGHPDAETLKNSGCPIYKELCLIF 159

Query: 125 S--------------------------------NFDDGQEI--------TSQPTKPNSSN 184
           S                                +  D  E+        T+QPT P S+ 
Sbjct: 160 SESAANGKHDLFAEDERGSPSIQCADPSSMHPESMSDSDEVDDIIDDQKTTQPTTPCSTA 219

Query: 185 SHKRGRKSDED------------------------ATYKIADCIKGLDEIDEMHGLEEGV 200
           + KRGRK  +D                        A + IADCI+   E+DEM G++E V
Sbjct: 220 NRKRGRKGMDDVIAGAIMEMAAASKLRTAAMLQCNARHTIADCIR---ELDEMQGVDEKV 279

BLAST of MS028021 vs. ExPASy TrEMBL
Match: A0A6J1CUQ3 (uncharacterized protein LOC111014759 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014759 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.8e-65
Identity = 140/215 (65.12%), Postives = 157/215 (73.02%), Query Frame = 0

Query: 1   MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRK 60
           M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRK
Sbjct: 18  MTDLMWTSNIAKILVELIIEQVQRGRKELEWGFICDEFCSRSKLMWDEEQLKHQYAVMRK 77

Query: 61  QYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARVTMNCPTYEELCIMFSNFDDG 120
           QYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   + +   TYE+LC +FSN D G
Sbjct: 78  QYLIVKSIFDRDDFSWHESTGIIVATVATDDARFIEEENLYL---TYEDLCRIFSNSDGG 137

Query: 121 QEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLE 180
           QE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLE
Sbjct: 138 QE-TSQPTKPNSSNSRKRGRKSGDDATYTMAGKKSGEDATYTIADCIKRLDEIAKMHGLE 197

Query: 181 EGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRN 199
           E +YFGALVLF EPN RETFL LK DK  NWLQRN
Sbjct: 198 EDIYFGALVLFKEPNVRETFLSLKVDKCCNWLQRN 228

BLAST of MS028021 vs. ExPASy TrEMBL
Match: A0A6J1CTZ5 (uncharacterized protein LOC111014759 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014759 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.0e-60
Identity = 132/204 (64.71%), Postives = 149/204 (73.04%), Query Frame = 0

Query: 1   MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRK 60
           M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRK
Sbjct: 18  MTDLMWTSNIAKILVELIIEQVQRGRKELEWGFICDEFCSRSKLMWDEEQLKHQYAVMRK 77

Query: 61  QYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARVTMNCPTYEELCIMFSNFDDG 120
           QYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   + +   TYE+LC +FSN D G
Sbjct: 78  QYLIVKSIFDRDDFSWHESTGIIVATVATDDARFIEEENLYL---TYEDLCRIFSNSDGG 137

Query: 121 QEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLE 180
           QE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLE
Sbjct: 138 QE-TSQPTKPNSSNSRKRGRKSGDDATYTMAGKKSGEDATYTIADCIKRLDEIAKMHGLE 197

Query: 181 EGVYFGALVLFNEPNARETFLCLK 188
           E +YFGALVLF EPN RETFL LK
Sbjct: 198 EDIYFGALVLFKEPNVRETFLSLK 217

BLAST of MS028021 vs. ExPASy TrEMBL
Match: A0A061DGI7 (Radiation sensitive 17, putative OS=Theobroma cacao OX=3641 GN=TCM_000169 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.9e-40
Identity = 103/279 (36.92%), Postives = 139/279 (49.82%), Query Frame = 0

Query: 2   SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQY 61
           S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y
Sbjct: 674 SRARWTTFLTKILADLLVEQVHRGNRQNSSFSKKAWKSMCDDFCKKTSLKWDKEQLKNRY 733

Query: 62  AVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELC 121
            V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +         T  CP Y++LC
Sbjct: 734 GVLRRQYVLVKSLLDQTDFSWNESTGDVIGNDEAWAEFIKGHPDAETIKTSGCPIYKQLC 793

Query: 122 IMFS-------------------------------------------NFDDGQEITSQPT 181
            +FS                                           +  D Q+ T QP+
Sbjct: 794 TIFSEPTTNGKHDYSAELGGDVPSSLPSLEPLSTIQEESSSESEEAEDVADDQDDTVQPS 853

Query: 182 KPNSSNSHKRGRKSDED------------------------ATYKIADCIKGLDEIDEMH 200
            P    + KRGRK  +D                        A Y IA CIK   E+DE+ 
Sbjct: 854 APGI--NRKRGRKGIDDAIAAAILEMAAASKLRTAAVRQSKARYSIASCIK---ELDELQ 913

BLAST of MS028021 vs. ExPASy TrEMBL
Match: A0A6P5YIE1 (L10-interacting MYB domain-containing protein-like OS=Durio zibethinus OX=66656 GN=LOC111292246 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 99/278 (35.61%), Postives = 135/278 (48.56%), Query Frame = 0

Query: 2   SDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQY 61
           S  RWT+   K LA++++E+V RG +      +  WK +CD+FC+KT + WD EQLKN+Y
Sbjct: 22  SRARWTTFLTKTLADMLVEQVHRGNRLNNSFNKRAWKSMCDDFCKKTGLKWDKEQLKNRY 81

Query: 62  AVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELC 121
            V+R+QY++V+S+     FSW  +TG I+  D+ WA   +         +  C  Y++LC
Sbjct: 82  GVLRRQYVLVKSLLDHSGFSWNESTGDIIGKDEAWADFIKDHPDAETIKSSGCSIYKQLC 141

Query: 122 IMFS----------NFDDGQEITS--------------------------------QPTK 181
            +FS          + + G+E+ S                                QP+ 
Sbjct: 142 TIFSEPTTNGKHDYSAEIGREVGSSLPSLEPLSRIQEESSSESEEVEDVADEQDAVQPSA 201

Query: 182 PNSSNSHKRGRKSDEDA------------------------TYKIADCIKGLDEIDEMHG 200
           P   +S KRGRK  +DA                         Y IA CIK   E+DEM G
Sbjct: 202 PCVISSRKRGRKGIDDAIAAAILEMAAASKLRTAAVKQCNSRYSIASCIK---ELDEMKG 261

BLAST of MS028021 vs. ExPASy TrEMBL
Match: A0A2N9J0Q6 (Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59019 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36
Identity = 103/277 (37.18%), Postives = 138/277 (49.82%), Query Frame = 0

Query: 1   MSDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQ 60
           +S  RWT+   KILA+L+I +V +G +      +  W+ ICDEF +KT + WD EQLKN+
Sbjct: 19  LSRARWTTSLTKILADLMINQVQKGNRHKNSFSKKAWRYICDEFYKKTGLKWDKEQLKNR 78

Query: 61  YAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKI--------ARVTMNCPTYEEL 120
           YAV+R+QY+ V+S+  + DF+W   TG IVA D+ WA+         A     CP Y+EL
Sbjct: 79  YAVLRRQYITVKSLLDQSDFNWDEFTGSIVAKDEAWAEYIMGHPDAEALKYSGCPIYKEL 138

Query: 121 CIMFS------NFD--------------------------DGQEI--------TSQPTKP 180
           C++FS      N D                          D  E+        T+QP  P
Sbjct: 139 CLIFSESAANGNHDLLAEDEGGSPSVPCAEPLSMHPESTSDSDEVDDIVDDHKTTQPASP 198

Query: 181 NSSNSHKRGRKSDED------------------------ATYKIADCIKGLDEIDEMHGL 200
            +  + KRGRK  +D                        A Y IADCI+   E+D M G+
Sbjct: 199 CTMGNRKRGRKGVDDVIAGAIMEMAAASKLRTAAIQQCTARYTIADCIR---ELDGMQGV 258

BLAST of MS028021 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 52/250 (20.80%), Postives = 97/250 (38.80%), Query Frame = 0

Query: 6   WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMR 65
           W     +   +L++++  RG       ++  W  + + F  K    +DV+ LKN+Y  +R
Sbjct: 186 WHPPMDRYFIDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESNFDVDVLKNRYKSLR 245

Query: 66  KQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELCIM-- 125
           +Q+  ++S+   D F+W     ++ A ++ W    +        +T   P Y++LC++  
Sbjct: 246 RQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

Query: 126 ---------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR----- 185
                          F    + QE  S  T       +   SNS      +KR +     
Sbjct: 306 DSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLFDPKNKRDQLANTD 365

Query: 186 ---------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLK 198
                    + DE  T  I D ++ +  + +M   ++ +   A  L  +    +TFL L 
Sbjct: 366 TSPINPKKPRVDETQTMSIEDTVEAIQALPDM---DDELILDACDLLEDKLKAKTFLALD 425

BLAST of MS028021 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 52/250 (20.80%), Postives = 97/250 (38.80%), Query Frame = 0

Query: 6   WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMR 65
           W     +   +L++++  RG       ++  W  + + F  K    +DV+ LKN+Y  +R
Sbjct: 186 WHPPMDRYFIDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESNFDVDVLKNRYKSLR 245

Query: 66  KQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR--------VTMNCPTYEELCIM-- 125
           +Q+  ++S+   D F+W     ++ A ++ W    +        +T   P Y++LC++  
Sbjct: 246 RQFNAIKSILRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

Query: 126 ---------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR----- 185
                          F    + QE  S  T       +   SNS      +KR +     
Sbjct: 306 DSGIEENECFVAMDWFDPETEFQEFKSSGTTDLSISAEEEDSNSLLFDPKNKRDQLANTD 365

Query: 186 ---------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLK 198
                    + DE  T  I D ++ +  + +M   ++ +   A  L  +    +TFL L 
Sbjct: 366 TSPINPKKPRVDETQTMSIEDTVEAIQALPDM---DDELILDACDLLEDKLKAKTFLALD 425

BLAST of MS028021 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 5.1e-04
Identity = 24/92 (26.09%), Postives = 41/92 (44.57%), Query Frame = 0

Query: 6  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMR 65
          W     ++  +L +E+ + G K      +  W+ I   F  +T   +D  QLKN +  M 
Sbjct: 7  WEPEYHRVFVDLCVEQTMLGNKPGTHFSKEGWRNILISFQEQTGAMYDRMQLKNHWDTMS 66

Query: 66 KQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA 92
          +Q+ I + +      +W   +    ATDD WA
Sbjct: 67 RQWKIWRRLVETSFMNWNPESNRFRATDDDWA 98

BLAST of MS028021 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 5.1e-04
Identity = 24/92 (26.09%), Postives = 41/92 (44.57%), Query Frame = 0

Query: 6  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMR 65
          W     ++  +L +E+ + G K      +  W+ I   F  +T   +D  QLKN +  M 
Sbjct: 7  WEPEYHRVFVDLCVEQTMLGNKPGTHFSKEGWRNILISFQEQTGAMYDRMQLKNHWDTMS 66

Query: 66 KQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA 92
          +Q+ I + +      +W   +    ATDD WA
Sbjct: 67 RQWKIWRRLVETSFMNWNPESNRFRATDDDWA 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145264.13.7e-6565.12uncharacterized protein LOC111014759 isoform X1 [Momordica charantia][more]
XP_022145265.12.1e-6064.71uncharacterized protein LOC111014759 isoform X2 [Momordica charantia][more]
EOX90801.11.2e-3936.92Radiation sensitive 17, putative [Theobroma cacao][more]
XP_017977880.14.6e-3936.56PREDICTED: L10-interacting MYB domain-containing protein-like [Theobroma cacao][more]
KAF3974668.12.8e-3636.63hypothetical protein CMV_002013 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CUQ31.8e-6565.12uncharacterized protein LOC111014759 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CTZ51.0e-6064.71uncharacterized protein LOC111014759 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A061DGI75.9e-4036.92Radiation sensitive 17, putative OS=Theobroma cacao OX=3641 GN=TCM_000169 PE=3 S... [more]
A0A6P5YIE11.3e-3635.61L10-interacting MYB domain-containing protein-like OS=Durio zibethinus OX=66656 ... [more]
A0A2N9J0Q62.3e-3637.18Myb_DNA-bind_3 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU... [more]
Match NameE-valueIdentityDescription
AT4G02210.16.5e-0720.80unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.26.5e-0720.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G05800.15.1e-0426.09unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G05800.25.1e-0426.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 5..92
e-value: 3.2E-13
score: 50.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..139
NoneNo IPR availablePANTHERPTHR47584FAMILY NOT NAMEDcoord: 139..199
coord: 3..122
NoneNo IPR availablePANTHERPTHR47584:SF9L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN-LIKEcoord: 139..199
coord: 3..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS028021.1MS028021.1mRNA