MS027938 (gene) Bitter gourd (TR) v1

Overview


Name	MS027938
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	auxin-responsive protein SAUR24-like
Location	scaffold375: 1508079 .. 1508372 (+)
RNA-Seq Expression	MS027938
Synteny	MS027938

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATCCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCAGTATATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAGCTGCTCAGCCATGCAGAAGAAGAATTTGGCTTCCATCATCCACAGGGGGGTCTGACAATTCCTTGCAAAGAGGATGCCTTCATTTATCTCACTTCTAGATTGCAAGTAGCTTGA

mRNA sequence

ATGGGGATCCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCAGTATATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAGCTGCTCAGCCATGCAGAAGAAGAATTTGGCTTCCATCATCCACAGGGGGGTCTGACAATTCCTTGCAAAGAGGATGCCTTCATTTATCTCACTTCTAGATTGCAAGTAGCTTGA

Coding sequence (CDS)

ATGGGGATCCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCAGTATATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAGCTGCTCAGCCATGCAGAAGAAGAATTTGGCTTCCATCATCCACAGGGGGGTCTGACAATTCCTTGCAAAGAGGATGCCTTCATTTATCTCACTTCTAGATTGCAAGTAGCTTGA

Protein sequence

MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

Homology

[Close]

BLAST of MS027938 vs. NCBI nr
Match: XP_022146168.1 (auxin-responsive protein SAUR24-like [Momordica charantia] >XP_022146169.1 auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 7.2e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LK+QSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKIQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS 97

[Close]

BLAST of MS027938 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. NCBI nr
Match: XP_023533292.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. NCBI nr
Match: XP_023007091.1 (auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. NCBI nr
Match: XP_022947576.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRL V+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHVS 97

[Close]

BLAST of MS027938 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIYLTSRLQ 96
           HP GGLTIPC ED FI +TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027938 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIYLTSRLQ 96
          GLTIPC ED FI +TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of MS027938 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIYLTSRLQ 96
          GLTIPC ED FI +TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of MS027938 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.9e-23
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIYLTSRLQ 96
          GLTIPC ED FI +TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of MS027938 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIYLTSRL 95
           HP GGLTIPC ED FI +TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of MS027938 vs. ExPASy TrEMBL
Match: A0A6J1CXV3 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015448 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.5e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LK+QSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKIQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS 97

[Close]

BLAST of MS027938 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. ExPASy TrEMBL
Match: A0A6J1KZJ6 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRL V+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHVS 97

[Close]

BLAST of MS027938 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQV+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of MS027938 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 58/97 (59.79%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FI L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of MS027938 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   K+              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+YL +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of MS027938 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI-YLTSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+  + SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of MS027938 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 55/98 (56.12%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA 98
          +LL  AEEEFGF HP GGLTIPC E  FI L SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of MS027938 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 4.4e-25
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIYLTSRLQ 96
           HP GGLTIPC ED FI +TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of MS027938 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146168.1	7.2e-46	95.88	auxin-responsive protein SAUR24-like [Momordica charantia] >XP_022146169.1 auxin...	[more]
XP_022947571.1	1.6e-45	95.88	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-...	[more]
XP_023533292.1	2.1e-45	94.85	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007091.1	2.1e-45	95.88	auxin-responsive protein SAUR24-like [Cucurbita maxima]	[more]
XP_022947576.1	3.6e-45	94.85	auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-re...	[more]

BLAST of MS027938 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	6.2e-24	64.29	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	2.3e-23	65.82	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	4.0e-23	64.56	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	8.9e-23	64.56	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF6	1.5e-22	62.65	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of MS027938 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXV3	3.5e-46	95.88	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1G6T7	7.8e-46	95.88	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1KZJ6	1.0e-45	95.88	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688...	[more]
A0A6J1G6U1	1.7e-45	94.85	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1JHE3	2.3e-45	94.85	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]

BLAST of MS027938 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	2.3e-26	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.5e-25	54.63	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.5e-25	55.24	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.0e-25	56.12	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.4e-25	64.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 8.0E-28 score: 96.5
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS027938.1	MS027938.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin