MS027792 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTACAAACAGGCTTTCTGCAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGCCTTGAAAGAAGCGTGCATTCGCGATGCCAGAAAGCGTATCGAGGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGGAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGGATTGA ATGGATGCTACAAACAGGCTTTCTGCAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGCCTTGAAAGAAGCGTGCATTCGCGATGCCAGAAAGCGTATCGAGGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGGAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGGATTGA ATGGATGCTACAAACAGGCTTTCTGCAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGCCTTGAAAGAAGCGTGCATTCGCGATGCCAGAAAGCGTATCGAGGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGGAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGGATTGA MDATNRLSAIACRNGATAKSNSRTPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQALYFMFLQQMLD Homology
BLAST of MS027792 vs. NCBI nr
Match: CAE5979087.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08 Identity = 46/71 (64.79%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of MS027792 vs. NCBI nr
Match: PLY71280.1 (hypothetical protein LSAT_0X38260 [Lactuca sativa] >PLY79829.1 hypothetical protein LSAT_8X11761 [Lactuca sativa] >PLY99082.1 hypothetical protein LSAT_6X64680 [Lactuca sativa]) HSP 1 Score: 67.8 bits (164), Expect = 4.5e-08 Identity = 45/71 (63.38%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MS027792 vs. NCBI nr
Match: GEX80027.1 (ribose-phosphate pyrophosphokinase 1-like [Tanacetum cinerariifolium]) HSP 1 Score: 63.9 bits (154), Expect = 6.6e-07 Identity = 43/71 (60.56%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MS027792 vs. NCBI nr
Match: GFC03515.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]) HSP 1 Score: 62.0 bits (149), Expect = 2.5e-06 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of MS027792 vs. NCBI nr
Match: CAB4099471.1 (unnamed protein product [Lactuca saligna]) HSP 1 Score: 61.6 bits (148), Expect = 3.3e-06 Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MS027792 vs. ExPASy TrEMBL
Match: A0A2J6K863 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X38260 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.2e-08 Identity = 45/71 (63.38%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MS027792 vs. ExPASy TrEMBL
Match: A0A6S7NTX4 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS26923 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06 Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of MS027792 vs. ExPASy TrEMBL
Match: A0A0D2LRW8 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G159900 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.7e-06 Identity = 42/71 (59.15%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of MS027792 vs. ExPASy TrEMBL
Match: A0A6S7LWT6 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS1276 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.6e-06 Identity = 41/66 (62.12%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of MS027792 vs. ExPASy TrEMBL
Match: A0A2J6JM05 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X67861 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.6e-06 Identity = 42/71 (59.15%), Postives = 43/71 (60.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|