MS027703 (gene) Bitter gourd (TR) v1

Overview
NameMS027703
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold729: 735833 .. 737156 (+)
RNA-Seq ExpressionMS027703
SyntenyMS027703
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGATGTCATTCGCTGTCGCCTCCGGCTTGGCCCGGTCCTATATATTCTATTCCTCACTCGCACTCTCTTCTTCTTCTCCAGAGCCTTCCATCAACTTCAGCGCCAGCGGCCTCTGCCCTTTTGATGGTTCGTTGCGACTTTGCAAACCCTAGATCCTTTCCAGTCAAAGAGAGCGCAGCGCAGAACTGGAAGAAGCCTTCTCGTCTCGTTGGTGAAAAAGTAGAGGTAATACAACTTCGTTTCGGCCTTTTATTGTTTTGGGATGGGATTGGATTGAAAATTCAAGGGTCCGTCCGGCTGTTCCGATTGTTTCTCTTTTGTTTGTTTTCCGCTGTGATGCCATTAATTTTTTCTTATTTGTCATCTTAATCAACGCATTCTCTCAGTGATTCTTTATTTATCTGTTTTGTTTTCTCTTTTCCTTCTGTGTGTTTATCTCGGGTCAATTGAGAACTTCTGAGGTTAATTAGGGTTTTCTTTTTTCTCTTTTTTCTTTTCGTGCTGTGGAAACGGATTAGGGTTTTATTGTCAAGCAGTACTCTTCGTTTTTTCGTATTTTATTAACGTTAGGAACGTGAAACATGGCAGGTGAGGAGTTTAGAAGACACGGCTTTCTTGGCTCTTGGCATAGGGGCATTGTTATCGTGTGTAACAATGGAGTTCATCATGTGTCATGTAATGTTCGTTTCTAAAATTTTATTAGATAATGTTAATGTTAACTCATCGATTGGGAATTCGAGTTTTATGTACTGTGTTTTGATGTGAATTACCAGGATGCGTGGTCGGCACGTGTTGTTTTTGGTTCACAACAGAGGAGGATGCAGAGGAGGATTTTATTTCTGAAATTGGGTGATGAATTGGAGGTTGGAATTGAAACATTTCGTATTACCCATTAGGATTGAGATGGATTTGACAGAGACGTGGGACCTGGTCGTATATTGAGCTAATTTCTCAACGTGAAAAAATTCCTCCCATCCCGTTTCTTTCAAGCAAAATACGGTATGAAGTTCATACTGATTTCTCATTCAGAAAATCACTGAATTACCACTGTTTTAAATTCCTCATACTATATTATCAATATGGAAATAATTAGTTTTCATTTTCAACATTTCTATGGTATTTTGGTAAAGGATACTTTACCAATTAATTTTTTTTTAATCCATCAAGACACGTTGATTGAAATGTTTATAATTCCTTCAATCCATTATAATTTATTCCTTTTATGTAGGCAATTCTAGTTGCCTTCTGCGGAGGATTCCAACATGCGTGCGACCTTCTCAAGTGCATTTTTGGCATTGTTGCAGTCCTAATAAGGTGA

mRNA sequence

ATGACTGGATGTCATTCGCTGTCGCCTCCGGCTTGGCCCGGTCCTATATATTCTATTCCTCACTCGCACTCTCTTCTTCTTCTCCAGAGCCTTCCATCAACTTCAGCGCCAGCGGCCTCTGCCCTTTTGATGGTTCGTTGCGACTTTGCAAACCCTAGATCCTTTCCAGTCAAAGAGAGCGCAGCGCAGAACTGGAAGAAGCCTTCTCGTCTCGTTGGTGAAAAAGTAGAGGAACGTGAAACATGGCAGGTGAGGAGTTTAGAAGACACGGCTTTCTTGGCTCTTGGCATAGGGGCATTGTTATCGTGTGTAACAATGGAGTTCATCATGTGTCATGATGCGTGGTCGGCACGTGTTGTTTTTGGTTCACAACAGAGGAGGATGCAGAGGAGGATTTTATTTCTGAAATTGGGTGATGAATTGGAGGCAATTCTAGTTGCCTTCTGCGGAGGATTCCAACATGCGTGCGACCTTCTCAAGTGCATTTTTGGCATTGTTGCAGTCCTAATAAGGTGA

Coding sequence (CDS)

ATGACTGGATGTCATTCGCTGTCGCCTCCGGCTTGGCCCGGTCCTATATATTCTATTCCTCACTCGCACTCTCTTCTTCTTCTCCAGAGCCTTCCATCAACTTCAGCGCCAGCGGCCTCTGCCCTTTTGATGGTTCGTTGCGACTTTGCAAACCCTAGATCCTTTCCAGTCAAAGAGAGCGCAGCGCAGAACTGGAAGAAGCCTTCTCGTCTCGTTGGTGAAAAAGTAGAGGAACGTGAAACATGGCAGGTGAGGAGTTTAGAAGACACGGCTTTCTTGGCTCTTGGCATAGGGGCATTGTTATCGTGTGTAACAATGGAGTTCATCATGTGTCATGATGCGTGGTCGGCACGTGTTGTTTTTGGTTCACAACAGAGGAGGATGCAGAGGAGGATTTTATTTCTGAAATTGGGTGATGAATTGGAGGCAATTCTAGTTGCCTTCTGCGGAGGATTCCAACATGCGTGCGACCTTCTCAAGTGCATTTTTGGCATTGTTGCAGTCCTAATAAGGTGA

Protein sequence

MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKESAAQNWKKPSRLVGEKVEERETWQVRSLEDTAFLALGIGALLSCVTMEFIMCHDAWSARVVFGSQQRRMQRRILFLKLGDELEAILVAFCGGFQHACDLLKCIFGIVAVLIR
Homology
[Close]
BLAST of MS027703 vs. NCBI nr
Match: XP_022144627.1 (uncharacterized protein LOC111014268 [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-50
Identity = 106/114 (92.98%), Postives = 107/114 (93.86%), Query Frame = 0 

Query: 1   MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES 60
           MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES
Sbjct: 1   MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES 60

Query: 61  AAQNWKKPSRLVGEKVEERETWQVRSLEDTAFLALGIGALLSCVTMEFIMCHDA 115
           AAQNWKKPSRLVGEKVE      VRSLEDTAFLALGIGALLSCVT EF+MCHDA
Sbjct: 61  AAQNWKKPSRLVGEKVE------VRSLEDTAFLALGIGALLSCVTTEFVMCHDA 108

[Close]
BLAST of MS027703 vs. ExPASy TrEMBL
Match: A0A6J1CU72 (uncharacterized protein LOC111014268 OS=Momordica charantia OX=3673 GN=LOC111014268 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.3e-51
Identity = 106/114 (92.98%), Postives = 107/114 (93.86%), Query Frame = 0 

Query: 1   MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES 60
           MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES
Sbjct: 1   MTGCHSLSPPAWPGPIYSIPHSHSLLLLQSLPSTSAPAASALLMVRCDFANPRSFPVKES 60

Query: 61  AAQNWKKPSRLVGEKVEERETWQVRSLEDTAFLALGIGALLSCVTMEFIMCHDA 115
           AAQNWKKPSRLVGEKVE      VRSLEDTAFLALGIGALLSCVT EF+MCHDA
Sbjct: 61  AAQNWKKPSRLVGEKVE------VRSLEDTAFLALGIGALLSCVTTEFVMCHDA 108

The following BLAST results are available for this feature:
BLAST of MS027703 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144627.11.3e-5092.98uncharacterized protein LOC111014268 [Momordica charantia][more]
BLAST of MS027703 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS027703 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CU726.3e-5192.98uncharacterized protein LOC111014268 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
BLAST of MS027703 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS027703.1MS027703.1mRNA