MS027635 (gene) Bitter gourd (TR) v1

Overview


Name	MS027635
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	non-specific lipid-transfer protein 2-like
Location	scaffold20: 2510241 .. 2510540 (-)
RNA-Seq Expression	MS027635
Synteny	MS027635

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAACTTCCGATCACAAGCCTTTTCCTTTTGGTTGCTGCAATGGTGGTGCTTCTCGCTGGAGCTCGTGCAGCGGAGGCTGCGGCGACTTGCGACCTTGACAATCTGAAACCATGTCTCTTGGCTTTCACGTTGCATGTGCGGCCATCGGGAGCTTGCTGCCGGAGGGTGAGGGAGCAAGAATCATGCTACTGTGCGTACTACAGAAATCCAAAATATACGCATTACTTGCAATCTTCTGCCGTCAAAAAGATCATTTCGAGATGTGGCTTTACCAGTGTTCCTACCTGCAGCTAG

mRNA sequence

ATGAGCAAACTTCCGATCACAAGCCTTTTCCTTTTGGTTGCTGCAATGGTGGTGCTTCTCGCTGGAGCTCGTGCAGCGGAGGCTGCGGCGACTTGCGACCTTGACAATCTGAAACCATGTCTCTTGGCTTTCACGTTGCATGTGCGGCCATCGGGAGCTTGCTGCCGGAGGGTGAGGGAGCAAGAATCATGCTACTGTGCGTACTACAGAAATCCAAAATATACGCATTACTTGCAATCTTCTGCCGTCAAAAAGATCATTTCGAGATGTGGCTTTACCAGTGTTCCTACCTGCAGCTAG

Coding sequence (CDS)

ATGAGCAAACTTCCGATCACAAGCCTTTTCCTTTTGGTTGCTGCAATGGTGGTGCTTCTCGCTGGAGCTCGTGCAGCGGAGGCTGCGGCGACTTGCGACCTTGACAATCTGAAACCATGTCTCTTGGCTTTCACGTTGCATGTGCGGCCATCGGGAGCTTGCTGCCGGAGGGTGAGGGAGCAAGAATCATGCTACTGTGCGTACTACAGAAATCCAAAATATACGCATTACTTGCAATCTTCTGCCGTCAAAAAGATCATTTCGAGATGTGGCTTTACCAGTGTTCCTACCTGCAGCTAG

Protein sequence

MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTCS

Homology

[Close]

BLAST of MS027635 vs. NCBI nr
Match: XP_022143310.1 (uncharacterized protein LOC111013210 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 4.9e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE
Sbjct: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60

Query: 61 QESCY 66
          QESCY
Sbjct: 61 QESCY 65

[Close]

BLAST of MS027635 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida])

HSP 1 Score: 91.3 bits (225), Expect = 5.1e-15
Identity = 49/98 (50.00%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV AM  LL GAR AE A TC    L PC+ AFT    PS ACC +++E
Sbjct: 1  MKNLSFTSLHLLVVAMAALLTGARLAE-AVTCSTMELSPCIGAFTSTAPPSAACCSKLKE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NPK   Y++S   K +IS CG  S P C
Sbjct: 61 QQPCFCGYIKNPKLGAYVKSPRAKTVISTCG-VSFPKC 96

[Close]

BLAST of MS027635 vs. NCBI nr
Match: XP_008444080.1 (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo] >KAA0064174.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++RE
Sbjct: 1  MKNLRFTSLHLLVVAIVALLTGARVAE-AVTCNTMQLSPCIGAITSTAPPSTTCCSKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NP    Y++S+  K IIS CG   +P C
Sbjct: 61 QQPCFCGYMKNPSLGGYVKSARAKAIISTCG-VPLPKC 96

[Close]

BLAST of MS027635 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata])

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 44/98 (44.90%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M K PIT  FL +A MV LL+GAR AE A  C    L  C  A T    PS  CC ++RE
Sbjct: 1  MKKFPITIAFLFMAVMVALLSGARVAE-AVNCSPMELSSCAGAITSSSTPSSTCCNKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C C Y RNP    Y+QS   +K+ ++CG    P+C
Sbjct: 61 QKPCLCGYIRNPALRPYVQSPGARKVAAKCG-VPFPSC 96

[Close]

BLAST of MS027635 vs. NCBI nr
Match: KGN53818.1 (hypothetical protein Csa_014950 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 46/98 (46.94%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV AM  LL GAR A+ A TC+   L PC+ A T    PS  CC ++RE
Sbjct: 1  MKNLGFTSLPLLVVAMAALLTGARVAD-AITCNTMGLSPCIGAMTSTAPPSTTCCSKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NP    Y++S+  K IIS CG    P C
Sbjct: 61 QQPCFCQYMKNPSLGGYVKSARAKAIISSCG-VPYPKC 96

[Close]

BLAST of MS027635 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-10
Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 8  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCA 67
          ++ +L  AMV    G     A A+C+   L  C  A     RP+ ACC  +R Q+ C+C 
Sbjct: 6  AVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQ 65

Query: 68 YYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          + ++P+Y  Y+ S   +K +S CG  ++PTC
Sbjct: 66 FAKDPRYGRYVNSPNARKAVSSCGI-ALPTC 95

[Close]

BLAST of MS027635 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-10
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 30 ATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISR 89
          ATC    L PCL A T +  PS ACC +++EQ+ C C Y ++P   +Y+ S   +K  S 
Sbjct: 1  ATCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASS 60

Query: 90 CG 92
          CG
Sbjct: 61 CG 62

[Close]

BLAST of MS027635 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.8e-10
Identity = 31/91 (34.07%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 8  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCA 67
          ++ +L  AMV    G     A A C+   L  C  A     RP+ ACC  +R Q+ C+C 
Sbjct: 6  AVLVLAVAMVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQ 65

Query: 68 YYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          + ++P+Y  Y+ S   +K +S CG  ++PTC
Sbjct: 66 FAKDPRYGRYVNSPNARKAVSSCGI-ALPTC 95

[Close]

BLAST of MS027635 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.3e-09
Identity = 33/98 (33.67%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M K  +T+L L +  +     GARAA     C    L  C  A     +PSG CC  +R 
Sbjct: 5  MKKQVVTALMLALVVLAAAPGGARAA-----CQASQLAVCASAILSGAKPSGECCGNLRA 64

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y ++P Y  Y++S   +  ++ CG  +VP C
Sbjct: 65 QQGCFCQYAKDPTYGQYIRSPHARDTLTSCGL-AVPHC 96

[Close]

BLAST of MS027635 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.3e-09
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 12  LVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRN 71
           ++  MVV LA    A A A C+   L  C  A     +PSG CC  +R Q+ C C Y ++
Sbjct: 17  VMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKD 76

Query: 72  PKYTHYLQSSAVKKIISRCGFTSVPTC 99
           P Y HY+ S   +  ++ CG   VP C
Sbjct: 77  PNYGHYVSSPHARDTLNLCGI-PVPHC 102

[Close]

BLAST of MS027635 vs. ExPASy TrEMBL
Match: A0A6J1CNG6 (uncharacterized protein LOC111013210 OS=Momordica charantia OX=3673 GN=LOC111013210 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE
Sbjct: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60

Query: 61 QESCY 66
          QESCY
Sbjct: 61 QESCY 65

[Close]

BLAST of MS027635 vs. ExPASy TrEMBL
Match: A0A5A7VAB3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001020 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++RE
Sbjct: 1  MKNLRFTSLHLLVVAIVALLTGARVAE-AVTCNTMQLSPCIGAITSTAPPSTTCCSKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NP    Y++S+  K IIS CG   +P C
Sbjct: 61 QQPCFCGYMKNPSLGGYVKSARAKAIISTCG-VPLPKC 96

[Close]

BLAST of MS027635 vs. ExPASy TrEMBL
Match: A0A1S3B931 (non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487520 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++RE
Sbjct: 1  MKNLRFTSLHLLVVAIVALLTGARVAE-AVTCNTMQLSPCIGAITSTAPPSTTCCSKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NP    Y++S+  K IIS CG   +P C
Sbjct: 61 QQPCFCGYMKNPSLGGYVKSARAKAIISTCG-VPLPKC 96

[Close]

BLAST of MS027635 vs. ExPASy TrEMBL
Match: A0A0A0KW85 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G146250 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 46/98 (46.94%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M  L  TSL LLV AM  LL GAR A+ A TC+   L PC+ A T    PS  CC ++RE
Sbjct: 1  MKNLGFTSLPLLVVAMAALLTGARVAD-AITCNTMGLSPCIGAMTSTAPPSTTCCSKLRE 60

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q+ C+C Y +NP    Y++S+  K IIS CG    P C
Sbjct: 61 QQPCFCQYMKNPSLGGYVKSARAKAIISSCG-VPYPKC 96

[Close]

BLAST of MS027635 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 1  MSKLPITS--LFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRV 60
          M KL IT   L+LLV A+  LL GAR  E A TC    L PC+ A    + PS ACC ++
Sbjct: 1  MKKLSITGLRLWLLVVAIAALLIGARVTE-AVTCSPTELSPCVTAILSGMPPSSACCSKL 60

Query: 61 REQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          REQ+ C C Y RNP    Y+QS   KK+ S CG  + P+C
Sbjct: 61 REQKPCLCGYLRNPNLKPYVQSPNAKKVASACG-VAFPSC 98

[Close]

BLAST of MS027635 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 31  TCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRC 90
           TCD   L+PCL A T   +PSGACC ++ EQ+SC C + +NP +  Y+ S   +K++  C
Sbjct: 36  TCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVLLAC 95

Query: 91  GFTSVPTC 99
              + PTC
Sbjct: 96  N-VAYPTC 102

[Close]

BLAST of MS027635 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 13  VAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNP 72
           + A  V L+G    EA  TCD   L  C       V PS  CC +++EQ+ C+C Y ++P
Sbjct: 22  IRATEVKLSG---GEADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDP 81

Query: 73  KYTHYLQSSAVKKIISRCGFTSVPTC 99
           +Y+ Y+ S+  KK ++ CG    PTC
Sbjct: 82  RYSQYVGSANAKKTLATCG-VPYPTC 103

[Close]

BLAST of MS027635 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10
Identity = 34/98 (34.69%), Postives = 48/98 (48.98%), Query Frame = 0


Query: 1  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVRE 60
          M K  + SLF L A ++++LA    A  A TC    L PC  A T    PS  CC +++E
Sbjct: 3  MIKTTMVSLFALAAVLLMILA---PAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKE 62

Query: 61 QESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          Q  C C Y RNP    ++ +   +K+   C    +P C
Sbjct: 63 QRPCLCGYMRNPSLRRFVSTPNARKVSKSCKL-PIPRC 96

[Close]

BLAST of MS027635 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 6.9e-10
Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 27  EAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKI 86
           E   TCD   L  C+ A +    PS  CC +++E E+C C Y +NP Y+ Y+ S   +K 
Sbjct: 33  EVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKT 92

Query: 87  ISRCGFTSVPTC 99
           ++ C   + PTC
Sbjct: 93  LAACD-VAYPTC 103

[Close]

BLAST of MS027635 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.5e-09
Identity = 33/88 (37.50%), Postives = 43/88 (48.86%), Query Frame = 0


Query: 11 LLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYR 70
          +L  A  +LL     AE   TC    L  C  A T    PS ACC ++REQ+ C C Y R
Sbjct: 9  VLALAAAILLLTVPVAE-GVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGYMR 68

Query: 71 NPKYTHYLQSSAVKKIISRCGFTSVPTC 99
          NP    Y+ S   +K+ + C   S P+C
Sbjct: 69 NPTLRQYVSSPNARKVSNSCKIPS-PSC 94

The following BLAST results are available for this feature:

BLAST of MS027635 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143310.1	4.9e-26	100.00	uncharacterized protein LOC111013210 [Momordica charantia]	[more]
XP_038904866.1	5.1e-15	50.00	non-specific lipid-transfer protein 2-like [Benincasa hispida]	[more]
XP_008444080.1	1.6e-13	47.96	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo] >KAA0064174...	[more]
XP_022955426.1	2.4e-12	44.90	non-specific lipid-transfer protein 2-like [Cucurbita moschata]	[more]
KGN53818.1	2.4e-12	46.94	hypothetical protein Csa_014950 [Cucumis sativus]	[more]

BLAST of MS027635 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XBN5	3.9e-10	34.07	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
P86809	5.2e-10	41.94	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
Q10ST8	8.8e-10	34.07	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P82900	3.3e-09	33.67	Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2	[more]
P20145	3.3e-09	36.78	Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 ...	[more]

BLAST of MS027635 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNG6	2.4e-26	100.00	uncharacterized protein LOC111013210 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5A7VAB3	8.0e-14	47.96	Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B931	8.0e-14	47.96	non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC1034875...	[more]
A0A0A0KW85	1.2e-12	46.94	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G146250 PE=4 SV...	[more]
A0A6J1D4R3	1.2e-12	47.00	non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of MS027635 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66850.1	1.1e-12	42.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	8.2e-11	37.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	3.1e-10	34.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	6.9e-10	36.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	4.5e-09	37.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 14..98 e-value: 1.1E-7 score: 31.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..99 e-value: 3.2E-17 score: 64.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..93
None	No IPR available	PANTHER	PTHR33214:SF59	NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-LIKE	coord: 11..98
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 11..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS027635.1	MS027635.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport