MS027312 (gene) Bitter gourd (TR) v1

Overview


Name	MS027312
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold373: 2514997 .. 2515374 (-)
RNA-Seq Expression	MS027312
Synteny	MS027312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATCATGCTTTGCATCTCCACTCGAGCATTGGAGCGTGCAGGTATTTAACGACATGCAAAGTCATCAAACTCTATCTCTTCATTGTAAGTCGAAAGACGACGATTTGGGACAGCAAAATCTCCGGATCGGGGAGCAATTTTCATGGAGATTTAGAGTGAATTTGTGGCAGACCACATTGTATTGGTGCTACATGCACAACCAACATAGCCATGTTGCTCTAGAGGTATTTTGGCCAGAGTCGCACATGTTTCTTTCTCGTAGATGCAAGGACAATGGTTGCATTTGGTACGCTCGAGATGATGGAATTTATTTGAAAAATGTTCCTGGGAATAAGTTTGAGCTTCAAGCTAAGTGGCAGCCCGGCTTGTAG

mRNA sequence

ATGGTTGAATCATGCTTTGCATCTCCACTCGAGCATTGGAGCGTGCAGGTATTTAACGACATGCAAAGTCATCAAACTCTATCTCTTCATTGTAAGTCGAAAGACGACGATTTGGGACAGCAAAATCTCCGGATCGGGGAGCAATTTTCATGGAGATTTAGAGTGAATTTGTGGCAGACCACATTGTATTGGTGCTACATGCACAACCAACATAGCCATGTTGCTCTAGAGGTATTTTGGCCAGAGTCGCACATGTTTCTTTCTCGTAGATGCAAGGACAATGGTTGCATTTGGTACGCTCGAGATGATGGAATTTATTTGAAAAATGTTCCTGGGAATAAGTTTGAGCTTCAAGCTAAGTGGCAGCCCGGCTTGTAG

Coding sequence (CDS)

ATGGTTGAATCATGCTTTGCATCTCCACTCGAGCATTGGAGCGTGCAGGTATTTAACGACATGCAAAGTCATCAAACTCTATCTCTTCATTGTAAGTCGAAAGACGACGATTTGGGACAGCAAAATCTCCGGATCGGGGAGCAATTTTCATGGAGATTTAGAGTGAATTTGTGGCAGACCACATTGTATTGGTGCTACATGCACAACCAACATAGCCATGTTGCTCTAGAGGTATTTTGGCCAGAGTCGCACATGTTTCTTTCTCGTAGATGCAAGGACAATGGTTGCATTTGGTACGCTCGAGATGATGGAATTTATTTGAAAAATGTTCCTGGGAATAAGTTTGAGCTTCAAGCTAAGTGGCAGCCCGGCTTGTAG

Protein sequence

MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL

Homology

[Close]

BLAST of MS027312 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-41
Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 0


Query: 1   MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQT 60
           ++++   +PLEHW+VQV N+MQ  Q+L LHCKSKDDD G+Q L+ G+ FSW+FR NLWQ 
Sbjct: 24  VIQTSDGAPLEHWAVQVKNEMQG-QSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQN 83

Query: 61  TLYWCYMHNQHSHVALEVFWPE--SHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQ 120
           TLYWCYM N H+HV+LEVFWPE  S  +LS RC+DN C W AR+DGIY+ NVP NKFEL 
Sbjct: 84  TLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELH 143

Query: 121 AKWQP 124
            KW P
Sbjct: 144 TKWLP 147

[Close]

BLAST of MS027312 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-35
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           PL  W + + N+M +  TL L CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMH
Sbjct: 29  PLSSWKINILNEM-TKDTLFLQCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMH 88

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           N  SH +  VFWPE   +L+ RC+   CIW ARDDGIYLK  P N FEL   W+PG+
Sbjct: 89  NAESHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWEPGM 144

[Close]

BLAST of MS027312 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-35
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           PL  W + + N+M +  TL L CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMH
Sbjct: 39  PLSSWKINILNEM-TKDTLFLQCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMH 98

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           N  SH +  VFWPE   +L+ RC+   CIW ARDDGIYLK  P N FEL   W+PG+
Sbjct: 99  NAESHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWEPGM 154

[Close]

BLAST of MS027312 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33
Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           PL  W V + N+M +  +L + CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMH
Sbjct: 104 PLSSWKVNILNEM-TKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMH 163

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           N  SH +  V+WPE   +L+ RC+   CIW ARDDGIYLK    N +EL   W+PG+
Sbjct: 164 NAKSHASFNVYWPERSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTWEPGM 219

[Close]

BLAST of MS027312 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33
Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           PL  W V + N+M +  +L + CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMH
Sbjct: 29  PLSSWKVNILNEM-TKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMH 88

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           N  SH +  V+WPE   +L+ RC+   CIW ARDDGIYLK    N +EL   W+PG+
Sbjct: 89  NAKSHASFNVYWPERSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTWEPGM 144

[Close]

BLAST of MS027312 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.9e-24
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 10  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHN 69
           +  W V V N + + +TL +HCKSK+DDLG+ NL+   +FSW F  N+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 70  QHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPG 125
            + H+ + VFW +  + L  RC    CIW A+ DG+YL N    +  L  KW+ G
Sbjct: 98  DNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of MS027312 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.8e-23
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 10  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHN 69
           +  W V V N + + +TL +HCKSK++DLG  NL+  ++FSW F  N+  +TL+WCYM  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 70  QHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPG 125
              H+ ++VFW +  + L  RC    C+W A++DG+YL N    +  L  KW+ G
Sbjct: 98  DDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKSG 150

[Close]

BLAST of MS027312 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           P    +V++ ND+ +  TL  HCKSKDDDLG + L+ GE +S+ F    +  TLY+C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
             +   + +++          +C+ + C+W  R +G    N    +F+L   W   L
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKSL 160

[Close]

BLAST of MS027312 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09
Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 27  LSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWC-YMHNQHSHVALEVFWPESHM 86
           L +HCKS+DDDLG   L  GE F W+F VN   +TLY+C +   Q      E++      
Sbjct: 58  LGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDF 117

Query: 87  FLSRRCKDNGCIWYARDDGIY 107
           +   RC +  C W A  DGIY
Sbjct: 118 Y---RCAN--CTWKAEKDGIY 133

[Close]

BLAST of MS027312 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-09
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 15  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHV 74
           V ++ND  +   L +HCKS+DDD G   L+ G  + W F VN   +TLY+C    +   V
Sbjct: 34  VVIYND--NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQE--QV 93

Query: 75  ALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKW 122
              VF     +  S RC++  C W A++DGIY       K  L  KW
Sbjct: 94  KKGVFDIYKAVRDSSRCRN--CTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS027312 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30
Identity = 60/119 (50.42%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNL-RIGEQFSWRFRVNLWQTTLYWCYM 68
           PL+ W++ V N + ++ TL +HCKSKDDDLG  +L   G++  W FR+N W+TTLYWC+M
Sbjct: 25  PLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFM 84

Query: 69  HNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           H  ++ V+ + FW E +H++L+ RCKD  CIW A+DDGIYL+N+P N  EL  KW   L
Sbjct: 85  HKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNDDELVHKWNTKL 143

[Close]

BLAST of MS027312 vs. ExPASy TrEMBL
Match: A0A6J1ESI0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437333 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.5e-30
Identity = 64/125 (51.20%), Postives = 82/125 (65.60%), Query Frame = 0


Query: 1   MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQT 60
           M ESCFA   + W ++VFNDM   +TL +HCKSKDDDLG+Q L++G    W FR N+W T
Sbjct: 18  MSESCFAYRFDAWRIRVFNDMSHGETLKIHCKSKDDDLGRQTLKVGNNIKWEFRENVWLT 77

Query: 61  TLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN-VPGNKFELQA 120
           TL+WC +++ H H ALEVF     + L  RC    CIW  RDDGIY++N    N +EL A
Sbjct: 78  TLFWCNIYSPHGHAALEVFNSRDPV-LYFRCHGFVCIWSIRDDGIYVRNSSQNNNYELIA 137

Query: 121 KWQPG 125
           KW+ G
Sbjct: 138 KWERG 141

[Close]

BLAST of MS027312 vs. ExPASy TrEMBL
Match: A0A6P4ACY4 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426490 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29
Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 15  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHV 74
           V + N +   + L  HCKSKDDDLG+ NL +G++FSW FR N ++TTLYWCY H  H H 
Sbjct: 38  VHIVNGLSPGRMLFAHCKSKDDDLGEHNLAVGQEFSWSFRFNFFETTLYWCYTHTDHQHA 97

Query: 75  ALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
           A  V+W +   +L  RC +  CIW A+DDG YLKN+P N+ EL  KW+ GL
Sbjct: 98  AFNVYWHKK--WLEDRCDERSCIWTAKDDGFYLKNIPENRDELIHKWEEGL 146

[Close]

BLAST of MS027312 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.8e-29
Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           PL  +++ + N + S + L +HC+SKDDDLG+ NL  G  F+W FR N W TT +WCY  
Sbjct: 36  PLYKYNMFIVNGLSSGRDLFIHCQSKDDDLGEHNLTTGSHFTWTFRTNFWGTTRFWCYAR 95

Query: 69  NQHSHVALEVFWPES-HMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPG 125
             + H A +VFWPE  H +L  RC    CIW A+DDG YL+NVP N+ EL  KW+PG
Sbjct: 96  RDNEHAAFDVFWPEKRHKWLETRCDYKVCIWTAKDDGFYLRNVPINQDELIHKWEPG 152

[Close]

BLAST of MS027312 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28
Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0


Query: 5   CFASPL----EHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQT 64
           C  SP+      W V V N++ + +TL  HCKSKDDDLG++NL  G +F+W F+ N + T
Sbjct: 23  CLGSPVGIRYNTWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGT 82

Query: 65  TLYWCYMHNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQA 123
           TLYWCYM     H AL+VFW E  H +L  RC    CIW A+DDGIY+K +P N+ E   
Sbjct: 83  TLYWCYMSTDQKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSH 142

[Close]

BLAST of MS027312 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 111.3 bits (277), Expect = 5.6e-25
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 10  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHN 69
           +  W V V N + + +TL +HCKSK+DDLG+ NL+   +FSW F  N+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 70  QHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPG 125
            + H+ + VFW +  + L  RC    CIW A+ DG+YL N    +  L  KW+ G
Sbjct: 98  DNGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of MS027312 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 107.8 bits (268), Expect = 6.2e-24
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 10  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHN 69
           +  W V V N + + +TL +HCKSK++DLG  NL+  ++FSW F  N+  +TL+WCYM  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 70  QHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPG 125
              H+ ++VFW +  + L  RC    C+W A++DG+YL N    +  L  KW+ G
Sbjct: 98  DDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKSG 150

[Close]

BLAST of MS027312 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12
Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 9   PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH 68
           P    +V++ ND+ +  TL  HCKSKDDDLG + L+ GE +S+ F    +  TLY+C   
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 69  NQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNKFELQAKWQPGL 126
             +   + +++          +C+ + C+W  R +G    N    +F+L   W   L
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNKSL 160

[Close]

BLAST of MS027312 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12
Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 15  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH---NQH 74
           V + N ++  + L +HC+SKDDDLG+  L+IG+ + + F  N+WQTT + C M    N  
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 75  SH---VALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK--NVPGNKFELQAKWQPGL 126
            H   VA E  W ++   L   CK     W  R+DGIY     VP  K     K+Q G+
Sbjct: 89  HHLDFVAYETSWSKA---LEASCK-----WIGREDGIYFSQDGVPPTK-----KYQDGV 134

[Close]

BLAST of MS027312 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-10
Identity = 32/96 (33.33%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 14  SVQVFNDM--QSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQH 73
           ++ V N++  ++   L +HCKSK++D+G + L+IGE  S+ F+ N W TT +WC ++   
Sbjct: 25  TITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGP 84

Query: 74  SHVALEVFWPESHMFLSRRCKDNGCI-WYARDDGIY 107
            +         ++  +    KD     W ARDDGIY
Sbjct: 85  DYKRYRGI--TAYQAIGLFAKDGSSYNWLARDDGIY 118

The following BLAST results are available for this feature:

BLAST of MS027312 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650840.1	4.0e-41	63.20	hypothetical protein Csa_017632 [Cucumis sativus]	[more]
XP_004136434.3	1.9e-35	58.97	S-protein homolog 1-like [Cucumis sativus]	[more]
KGN60342.2	1.9e-35	58.97	hypothetical protein Csa_002569, partial [Cucumis sativus]	[more]
KAE8651384.1	5.3e-33	55.56	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	5.3e-33	55.56	S-protein homolog 1-like [Cucumis sativus]	[more]

BLAST of MS027312 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	7.9e-24	40.87	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	8.8e-23	40.00	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	2.0e-11	29.91	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	3.2e-09	40.74	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F2Q9V4	5.5e-09	36.45	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of MS027312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPJ1	1.5e-30	50.42	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]
A0A6J1ESI0	4.5e-30	51.20	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437333 PE=3 SV=1	[more]
A0A6P4ACY4	2.2e-29	51.35	S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426490 PE=3 SV=1	[more]
A0A6P4ABD6	3.8e-29	49.57	S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1	[more]
A0A5E4EJG4	1.1e-28	48.78	S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1	[more]

BLAST of MS027312 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	5.6e-25	40.87	S-protein homologue 1	[more]
AT4G29035.1	6.2e-24	40.00	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.4e-12	29.91	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.9e-12	36.97	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	5.1e-10	33.33	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 15..121 e-value: 4.4E-27 score: 94.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 9..121
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 9..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS027312.1	MS027312.1	mRNA