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MS027249 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACAAAGGGATGTGATCAGATTGAAGCTTCTGATAGACTCGGACTCAGAAAGGGTTCTTTTTGCTGAAGCAGACAAGAATTTTATCGACTTCCTTTTCAATTTTCGTTCCCTCCCGCTTGGGGCAGTGATGAGGCTGCTGAAAAATCAATCCATGGTGTGGGGCTTGGGAAATTTGTACGAGACTGTTGAAACCTTGAACGACACGTATTTACAGCCAAACCAGATCAGCAAAGATAGTCTACTGAAGCCCACGTTTTATCGTGGTTCTTCGGCCATTCTTTTGCCAGATGATGCTGCTGTGGTGACTTACATTGTGATGGATGACTTATCTGTGATGCCCATGTCTGCCATTTCTTGCTTGTCTCTTTTGAACAAGTTCAATGTCACTAAAGTTGATGGTTTAGAGGAAAAGCTCATCACTTTGGATGTCAACGAGGTAATTTATCGATGCTCGAGAAACTATAAGATTGTAAAGTTGTGTGCAAACAAAGTTTCACATTGGTTATCGAAGGTGTGATCCATGATATATAAAAATGAGGATAATTATCTATGTTATAGTTAGTTTGGTTGAAAAGGAACCATTGAACTTTTGTAGATATCTCAAAGACATGCAATCATCTTTGGGATGATATCATTGCTCTAGCTTCCTCCTGTTATTAAAATCAAAGTTTTTTTTTTTTAATTATGATATACCTTCCATTTCTCTTAATTGTAATTTAACCTCCCTTATTTTGTGGGTCCGGGTTCTTTTCAAATAAAAAAAAAAGAAGATAATTATCTACCTTGATATGAAGTTTTTTGGTGAAGCCAATAGCAAAGCTGTGAAAACCAAGTCTAAAGCAAATAATATCAAACAAGATTAAAAATTTTGACTTTTTTAAGTTACATTTTTTTGCTTTTGTTTGTAGGGTGTGAAATTGCTAAAGGCTTCCCTTCAATCCAATACTGTTCTCACCGACGTCTTGTTTGGAAGGATGACAACTACTATTACACTTGAAGGATGA ATGGCACAAAGGGATGTGATCAGATTGAAGCTTCTGATAGACTCGGACTCAGAAAGGGTTCTTTTTGCTGAAGCAGACAAGAATTTTATCGACTTCCTTTTCAATTTTCGTTCCCTCCCGCTTGGGGCAGTGATGAGGCTGCTGAAAAATCAATCCATGGTGTGGGGCTTGGGAAATTTGTACGAGACTGTTGAAACCTTGAACGACACGTATTTACAGCCAAACCAGATCAGCAAAGATAGTCTACTGAAGCCCACGTTTTATCGTGGTTCTTCGGCCATTCTTTTGCCAGATGATGCTGCTGTGGTGACTTACATTGTGATGGATGACTTATCTGTGATGCCCATGTCTGCCATTTCTTGCTTGTCTCTTTTGAACAAGTTCAATGTCACTAAAGTTGATGGTTTAGAGGAAAAGCTCATCACTTTGGATGTCAACGAGGGTGTGAAATTGCTAAAGGCTTCCCTTCAATCCAATACTGTTCTCACCGACGTCTTGTTTGGAAGGATGACAACTACTATTACACTTGAAGGATGA ATGGCACAAAGGGATGTGATCAGATTGAAGCTTCTGATAGACTCGGACTCAGAAAGGGTTCTTTTTGCTGAAGCAGACAAGAATTTTATCGACTTCCTTTTCAATTTTCGTTCCCTCCCGCTTGGGGCAGTGATGAGGCTGCTGAAAAATCAATCCATGGTGTGGGGCTTGGGAAATTTGTACGAGACTGTTGAAACCTTGAACGACACGTATTTACAGCCAAACCAGATCAGCAAAGATAGTCTACTGAAGCCCACGTTTTATCGTGGTTCTTCGGCCATTCTTTTGCCAGATGATGCTGCTGTGGTGACTTACATTGTGATGGATGACTTATCTGTGATGCCCATGTCTGCCATTTCTTGCTTGTCTCTTTTGAACAAGTTCAATGTCACTAAAGTTGATGGTTTAGAGGAAAAGCTCATCACTTTGGATGTCAACGAGGGTGTGAAATTGCTAAAGGCTTCCCTTCAATCCAATACTGTTCTCACCGACGTCTTGTTTGGAAGGATGACAACTACTATTACACTTGAAGGATGA MAQRDVIRLKLLIDSDSERVLFAEADKNFIDFLFNFRSLPLGAVMRLLKNQSMVWGLGNLYETVETLNDTYLQPNQISKDSLLKPTFYRGSSAILLPDDAAVVTYIVMDDLSVMPMSAISCLSLLNKFNVTKVDGLEEKLITLDVNEGVKLLKASLQSNTVLTDVLFGRMTTTITLEG Homology
BLAST of MS027249 vs. NCBI nr
Match: XP_022139194.1 (uncharacterized protein LOC111010162 [Momordica charantia]) HSP 1 Score: 226.5 bits (576), Expect = 1.8e-55 Identity = 135/227 (59.47%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of MS027249 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43 Identity = 115/225 (51.11%), Postives = 133/225 (59.11%), Query Frame = 0
BLAST of MS027249 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia]) HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42 Identity = 121/232 (52.16%), Postives = 134/232 (57.76%), Query Frame = 0
BLAST of MS027249 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 1.8e-39 Identity = 110/225 (48.89%), Postives = 130/225 (57.78%), Query Frame = 0
BLAST of MS027249 vs. NCBI nr
Match: XP_015942229.2 (uncharacterized protein LOC107467605 [Arachis duranensis]) HSP 1 Score: 169.9 bits (429), Expect = 2.0e-38 Identity = 99/183 (54.10%), Postives = 126/183 (68.85%), Query Frame = 0
BLAST of MS027249 vs. ExPASy TrEMBL
Match: A0A6J1CC87 (uncharacterized protein LOC111010162 OS=Momordica charantia OX=3673 GN=LOC111010162 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 8.9e-56 Identity = 135/227 (59.47%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of MS027249 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 6.0e-44 Identity = 115/225 (51.11%), Postives = 133/225 (59.11%), Query Frame = 0
BLAST of MS027249 vs. ExPASy TrEMBL
Match: A0A1S3CGQ2 (uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 6.0e-44 Identity = 115/225 (51.11%), Postives = 133/225 (59.11%), Query Frame = 0
BLAST of MS027249 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42 Identity = 121/232 (52.16%), Postives = 134/232 (57.76%), Query Frame = 0
BLAST of MS027249 vs. ExPASy TrEMBL
Match: A0A6P4BS33 (uncharacterized protein LOC107467605 OS=Arachis duranensis OX=130453 GN=LOC107467605 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 9.9e-39 Identity = 99/183 (54.10%), Postives = 126/183 (68.85%), Query Frame = 0
BLAST of MS027249 vs. TAIR 10
Match: AT5G01120.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of MS027249 vs. TAIR 10
Match: AT5G43240.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of MS027249 vs. TAIR 10
Match: AT5G43240.3 (Protein of unknown function (DUF674) ) HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09 Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of MS027249 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08 Identity = 57/216 (26.39%), Postives = 88/216 (40.74%), Query Frame = 0
BLAST of MS027249 vs. TAIR 10
Match: AT5G01140.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-07 Identity = 50/213 (23.47%), Postives = 86/213 (40.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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