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MS027248 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGAGCAGCCGAAGTGAGGTTGAAACTTCTTATTGATTCGAAAGAAAACAGAGTTCTCATCGGTGAAGCGGACAAGAATTTCATCGACTTTCTTTTCAATCTGCTTTTTCTCCCACTTGGGACTGTGATTAGGCTGCTCCAAAAGGAAGGCATGGTGGGGTGCTTGGGAAATCTGTACGCAAGCGTGCAGACCTTGAACGAGACATATTTGCAGCCAAACCAGAGCAATGCCTCTCTTTTGAAGCCCAAATTTTCATTCTGTGGTTCCTCGGCCATGCTTTTGCCTAATATTGGTTCCTCGTCTGCGACAAAGTTTTATTTGTGTAGGAATCACTGTAGCGGTTACATTGCCAATGACCCTAAAGCGACCTGTCCGAGTTGCAGCAGATTGATGGACCAAGTGTGTTAA ATGGCAGGAGCAGCCGAAGTGAGGTTGAAACTTCTTATTGATTCGAAAGAAAACAGAGTTCTCATCGGTGAAGCGGACAAGAATTTCATCGACTTTCTTTTCAATCTGCTTTTTCTCCCACTTGGGACTGTGATTAGGCTGCTCCAAAAGGAAGGCATGGTGGGGTGCTTGGGAAATCTGTACGCAAGCGTGCAGACCTTGAACGAGACATATTTGCAGCCAAACCAGAGCAATGCCTCTCTTTTGAAGCCCAAATTTTCATTCTGTGGTTCCTCGGCCATGCTTTTGCCTAATATTGGTTCCTCGTCTGCGACAAAGTTTTATTTGTGTAGGAATCACTGTAGCGGTTACATTGCCAATGACCCTAAAGCGACCTGTCCGAGTTGCAGCAGATTGATGGACCAAGTGTGTTAA ATGGCAGGAGCAGCCGAAGTGAGGTTGAAACTTCTTATTGATTCGAAAGAAAACAGAGTTCTCATCGGTGAAGCGGACAAGAATTTCATCGACTTTCTTTTCAATCTGCTTTTTCTCCCACTTGGGACTGTGATTAGGCTGCTCCAAAAGGAAGGCATGGTGGGGTGCTTGGGAAATCTGTACGCAAGCGTGCAGACCTTGAACGAGACATATTTGCAGCCAAACCAGAGCAATGCCTCTCTTTTGAAGCCCAAATTTTCATTCTGTGGTTCCTCGGCCATGCTTTTGCCTAATATTGGTTCCTCGTCTGCGACAAAGTTTTATTTGTGTAGGAATCACTGTAGCGGTTACATTGCCAATGACCCTAAAGCGACCTGTCCGAGTTGCAGCAGATTGATGGACCAAGTGTGTTAA MAGAAEVRLKLLIDSKENRVLIGEADKNFIDFLFNLLFLPLGTVIRLLQKEGMVGCLGNLYASVQTLNETYLQPNQSNASLLKPKFSFCGSSAMLLPNIGSSSATKFYLCRNHCSGYIANDPKATCPSCSRLMDQVC Homology
BLAST of MS027248 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41 Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of MS027248 vs. NCBI nr
Match: XP_022139194.1 (uncharacterized protein LOC111010162 [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 1.9e-39 Identity = 91/137 (66.42%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of MS027248 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 171.4 bits (433), Expect = 5.4e-39 Identity = 91/139 (65.47%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of MS027248 vs. NCBI nr
Match: KAE8647976.1 (hypothetical protein Csa_000363 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36 Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of MS027248 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36 Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of MS027248 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 9.6e-42 Identity = 96/139 (69.06%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of MS027248 vs. ExPASy TrEMBL
Match: A0A6J1CC87 (uncharacterized protein LOC111010162 OS=Momordica charantia OX=3673 GN=LOC111010162 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 9.0e-40 Identity = 91/137 (66.42%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of MS027248 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 91/139 (65.47%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of MS027248 vs. ExPASy TrEMBL
Match: A0A1S3CGQ2 (uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.6e-39 Identity = 91/139 (65.47%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of MS027248 vs. ExPASy TrEMBL
Match: A0A0A0KLL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180325 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36 Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0
BLAST of MS027248 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 82.8 bits (203), Expect = 2.4e-16 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of MS027248 vs. TAIR 10
Match: AT3G09120.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 78.6 bits (192), Expect = 4.4e-15 Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 0
BLAST of MS027248 vs. TAIR 10
Match: AT5G43240.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 78.6 bits (192), Expect = 4.4e-15 Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of MS027248 vs. TAIR 10
Match: AT5G43240.3 (Protein of unknown function (DUF674) ) HSP 1 Score: 78.6 bits (192), Expect = 4.4e-15 Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of MS027248 vs. TAIR 10
Match: AT5G01120.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14 Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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