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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGCGTACCATTTCCCTCATCTTTTTCTTTTGCTCTCACTCTCAGCGTACCCATTTGCGGACCCCTCCCTGACCCTCAATTCGATTTTGTCGCTGCTGTGCCTGTGACTCACTTTTTTGTACACTGTCCAGACTCGCTCCTCGCTCCTCGCTCCAACCCCAACACTTCGATTCGCTCTAAATTCGCGAATTCAATTCCCCTTTTCTCAGCTCAGGGAAGCTCACCAACTCCTTTTTTTTTTCTGCATCAGACGCCTCAGGATTCAGGATTCTGCGATTATTGTCAGGTGATCCATGTTTTGTTCTGCTTTCGAAGGGTTTCTTTTGCTTTTGGGTGATGTTTCGTTTGAATTGGGGTGAATTACTTTAGATTTACCTGGTGTATTTCATGCATGGTTTGACTTCTGTTTCACGAACATTATGCATTTCTTCTTTGAGCTGA mRNA sequence ATGCGCGTACCATTTCCCTCATCTTTTTCTTTTGCTCTCACTCTCAGCGTACCCATTTGCGGACCCCTCCCTGACCCTCAATTCGATTTTGTCGCTGCTGTGCCTGTGACTCACTTTTTTGTACACTGTCCAGACTCGCTCCTCGCTCCTCGCTCCAACCCCAACACTTCGATTCGCTCTAAATTCGCGAATTCAATTCCCCTTTTCTCAGCTCAGGGAAGCTCACCAACTCCTTTTTTTTTTCTGCATCAGACGCCTCAGGATTCAGGATTCTGCGATTATTGTCAGATTTACCTGGTGTATTTCATGCATGGTTTGACTTCTGTTTCACGAACATTATGCATTTCTTCTTTGAGCTGA Coding sequence (CDS) ATGCGCGTACCATTTCCCTCATCTTTTTCTTTTGCTCTCACTCTCAGCGTACCCATTTGCGGACCCCTCCCTGACCCTCAATTCGATTTTGTCGCTGCTGTGCCTGTGACTCACTTTTTTGTACACTGTCCAGACTCGCTCCTCGCTCCTCGCTCCAACCCCAACACTTCGATTCGCTCTAAATTCGCGAATTCAATTCCCCTTTTCTCAGCTCAGGGAAGCTCACCAACTCCTTTTTTTTTTCTGCATCAGACGCCTCAGGATTCAGGATTCTGCGATTATTGTCAGATTTACCTGGTGTATTTCATGCATGGTTTGACTTCTGTTTCACGAACATTATGCATTTCTTCTTTGAGCTGA Protein sequence MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPVTHFFVHCPDSLLAPRSNPNTSIRSKFANSIPLFSAQGSSPTPFFFLHQTPQDSGFCDYCQIYLVYFMHGLTSVSRTLCISSLS
Homology
BLAST of MS027247 vs. NCBI nr
Match: XP_022139001.1 (protein INVOLVED IN DE NOVO 2-like [Momordica charantia] >XP_022139002.1 protein INVOLVED IN DE NOVO 2-like [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0 Query: 1 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPVTHFFVHCPDSLLAPRSNPNTSIRS 60 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPV HFFVHCPDSLLAP ++ S Sbjct: 1 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPVAHFFVHCPDSLLAPTPTLRFALNS 60
Query: 61 KFANSIPLFSAQGSSPTPFFF 82 + P + + FFF Sbjct: 61 RI--QFPFSQLREAHQLLFFF 79
BLAST of MS027247 vs. ExPASy TrEMBL
Match: A0A6J1CCT0 (protein INVOLVED IN DE NOVO 2-like OS=Momordica charantia OX=3673 GN=LOC111010041 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.3e-20 Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 0 Query: 1 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPVTHFFVHCPDSLLAPRSNPNTSIRS 60 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPV HFFVHCPDSLLAP ++ S Sbjct: 1 MRVPFPSSFSFALTLSVPICGPLPDPQFDFVAAVPVAHFFVHCPDSLLAPTPTLRFALNS 60
Query: 61 KFANSIPLFSAQGSSPTPFFF 82 + P + + FFF Sbjct: 61 RI--QFPFSQLREAHQLLFFF 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022139001.1 | 1.1e-19 | 66.67 | protein INVOLVED IN DE NOVO 2-like [Momordica charantia] >XP_022139002.1 protein... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CCT0 | 5.3e-20 | 66.67 | protein INVOLVED IN DE NOVO 2-like OS=Momordica charantia OX=3673 GN=LOC11101004... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS027247.1 | MS027247.1 | mRNA |
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