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MS027238 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAATCGCTAGGAATCAAATACGAGGGAAGATCCCCAGGGAGATTGGAAATCTTATCAACTTGGAAGCCTTGGGAATGGAGACAAATCAGTTAACTGGTACAATACCAGGATCAATAGGTAAACTGCAAAAACTTCAATCTCTATTTCTTAATGGAAATAGACTTGTAGGGGCTATCCCACCTTCTATAGGCAATTTAACCATGTTGATAAGATTAAATCTAAGGGAAAATAATTTGGAGGGAAGCATACCACCAAGTATTGGGCAATGCCAACAATTGCTAGAGATGTCTCTTGCCCTTAATAATCTTAATGGTTCCATACCAAAGGAGGTCTTTGTTACATCATTGTTTGCTTTTGATTGGTCTGAAAATCATTTGATTGGTCCCATTCCCATGGAAGTGAGCAAGTTGGTAAACCTTAATTATATGAATATTTCCAAGAACAAGTTATCTGGAGAGCTTCCAAATAGTTTAGGTAGTTGCATACGCCTAGAGACTCTAGCCTTAAGTGGCAACATGATTCGAGGAACCATTCCCCAGTCTTTGAGCTCCTTGAGAGGAATTCAGATTCTTGACCTGTCTCAAAATAACTTGTCTGGCGAAATTCCAGAATATTTTGACAGCTTCCAGGTTTTGGAGTACTTGAATCTCTCATTCAACAACTTTGATGGTGAGTTACCTATGCAAGGGGTCTTTAAGAATGCAAGTAAGTTTTCAGTCACAGGGAACTTAAGACTTTGTGGAGGAATACCCGAACTAAAGCTATCCAGCTGCAAATCCAACCAGCCCAAGAAATTGTCTCCTAAGCTAAAACTATTCGTCATAATTGCTGGTGCAATTATTGGTCTAATCTCAATGTTGGCTTTTGCTGCTCTATTTTGGCTGAGGAAAAAAAGAAGCATTCTTCCACCAAGCTTGTTGCAACCTTCTAGTTTGCAACTATCATATAATGATCTCTTCAAAGCAACTAATGGATTTGCTCCTTCTAATTTGATCGGCAAAGGTGGTTTTGGTTCAGTGTATAGAGGAATTCTTGATCCAGATGAGATGGTCGTTGCAGTGAAAGTGTTCAACCTTCAATACAGAGGATCCTTCAAGAGCTTCATGGCTGAATGTGAAGCCTTGAGAAATATTAGGCATCGAAATCTTGTGAAGTCGCTAACCGTGTGTTCAAGTATTGATTTTCAAGGTAATGACTTTATGGCATTGGTCTATGAGTTCATGGTGAATGGGAGCTTAGAAGATTGGTTGTATCCTGTTGATGGAAGTCATCAAGGTTTGAATCTTATGCAAAGGTTAAATATTGCCATAGAGGTGGCCAGTGCTTTGGAGTATTTGCATAATCAATGCCACATAAAAATTGTCCATTGTGATCTAAAGCCAAGCAACATTCTTCTTGATGGTGACATGACTGCCCACATAGGAGATTTTGGATTAGCAAGAATTATTCATGAAGCTTCTGAGCATTTATCTTTGGAGCAGACAAGTTCAATTGGACTAAGAGGTTCTATAGGCTATACCGCCCCAGGTACCGTAATCACAAACTTTTTCCCTCAAGAATATAAATGTTTTGGCATCAACTAAACAAAGCATTTGATGATCCTCTTTTCTGAAACACTTTTTTGAATCTAAATCAAATATCGTATTAATTTACTTGCATAGCTAATTTTGAAAGTGTTACATTCAAGCATCATCAACCACAGTTTCTCAAATGACATGCAGAATATGGGATGGGTGGTAAAGCATCAACTGATGGTGATATGTATAGCTATGGAATCTTGCTACTGGAGATGTTCACGGGGAAAAAACCAACTGATGACATATTCAAAGAAGGGTTAGACCTGCACAACTTTGCATTGATGAGTTTGTCAGAAGGAATATGGAATGTTGTAGAAACTAGAAACAATGACACTCAAAATACCCACAGGTTTCTAGTCTCCATTATTCAACTAGGACTCAAATGTTCTGTCACACACCCCAAAGAGAGAAAGGATATTAGCCAAGTTGTAGCTGAATTATCTTCAATTCAGAGGATTCTCCTTGGAAATGGGGCTTGA ATGACAATCGCTAGGAATCAAATACGAGGGAAGATCCCCAGGGAGATTGGAAATCTTATCAACTTGGAAGCCTTGGGAATGGAGACAAATCAGTTAACTGGTACAATACCAGGATCAATAGAATATGGGATGGGTGGTAAAGCATCAACTGATGGTGATATGTATAGCTATGGAATCTTGCTACTGGAGATGTTCACGGGGAAAAAACCAACTGATGACATATTCAAAGAAGGGTTAGACCTGCACAACTTTGCATTGATGAGTTTGTCAGAAGGAATATGGAATGTTGTAGAAACTAGAAACAATGACACTCAAAATACCCACAGGTTTCTAGTCTCCATTATTCAACTAGGACTCAAATGTTCTGTCACACACCCCAAAGAGAGAAAGGATATTAGCCAAGTTGTAGCTGAATTATCTTCAATTCAGAGGATTCTCCTTGGAAATGGGGCTTGA ATGACAATCGCTAGGAATCAAATACGAGGGAAGATCCCCAGGGAGATTGGAAATCTTATCAACTTGGAAGCCTTGGGAATGGAGACAAATCAGTTAACTGGTACAATACCAGGATCAATAGAATATGGGATGGGTGGTAAAGCATCAACTGATGGTGATATGTATAGCTATGGAATCTTGCTACTGGAGATGTTCACGGGGAAAAAACCAACTGATGACATATTCAAAGAAGGGTTAGACCTGCACAACTTTGCATTGATGAGTTTGTCAGAAGGAATATGGAATGTTGTAGAAACTAGAAACAATGACACTCAAAATACCCACAGGTTTCTAGTCTCCATTATTCAACTAGGACTCAAATGTTCTGTCACACACCCCAAAGAGAGAAAGGATATTAGCCAAGTTGTAGCTGAATTATCTTCAATTCAGAGGATTCTCCTTGGAAATGGGGCTTGA MTIARNQIRGKIPREIGNLINLEALGMETNQLTGTIPGSIEYGMGGKASTDGDMYSYGILLLEMFTGKKPTDDIFKEGLDLHNFALMSLSEGIWNVVETRNNDTQNTHRFLVSIIQLGLKCSVTHPKERKDISQVVAELSSIQRILLGNGA Homology
BLAST of MS027238 vs. NCBI nr
Match: KAG5227421.1 (LRR receptor serine/threonine-protein kinase [Salix suchowensis]) HSP 1 Score: 148.7 bits (374), Expect = 4.1e-32 Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = 0
BLAST of MS027238 vs. NCBI nr
Match: KAF7132136.1 (hypothetical protein RHSIM_Rhsim09G0173700 [Rhododendron simsii]) HSP 1 Score: 127.9 bits (320), Expect = 7.5e-26 Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of MS027238 vs. NCBI nr
Match: XP_034229526.1 (putative receptor-like protein kinase At3g47110 [Prunus dulcis] >VVA18331.1 PREDICTED: probable LRR receptor [Prunus dulcis]) HSP 1 Score: 125.2 bits (313), Expect = 4.9e-25 Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0
BLAST of MS027238 vs. NCBI nr
Match: XP_020409141.1 (putative receptor-like protein kinase At3g47110 [Prunus persica]) HSP 1 Score: 124.4 bits (311), Expect = 8.3e-25 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of MS027238 vs. NCBI nr
Match: KAF7132155.1 (hypothetical protein RHSIM_Rhsim09G0173600 [Rhododendron simsii]) HSP 1 Score: 124.4 bits (311), Expect = 8.3e-25 Identity = 61/164 (37.20%), Postives = 97/164 (59.15%), Query Frame = 0
BLAST of MS027238 vs. ExPASy Swiss-Prot
Match: C0LGT6 (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana OX=3702 GN=EFR PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0
HSP 2 Score: 42.7 bits (99), Expect = 4.2e-03 Identity = 18/37 (48.65%), Postives = 27/37 (72.97%), Query Frame = 0
BLAST of MS027238 vs. ExPASy Swiss-Prot
Match: Q2R2D5 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of MS027238 vs. ExPASy Swiss-Prot
Match: Q1MX30 (Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.2e-15 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of MS027238 vs. ExPASy Swiss-Prot
Match: C0LGP4 (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.9e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0
BLAST of MS027238 vs. ExPASy Swiss-Prot
Match: Q9SD62 (Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of MS027238 vs. ExPASy TrEMBL
Match: A0A5E4EUX2 (PREDICTED: probable LRR receptor OS=Prunus dulcis OX=3755 GN=ALMOND_2B011157 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-25 Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0
BLAST of MS027238 vs. ExPASy TrEMBL
Match: M5VUE3 (Protein kinase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa023481mg PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.0e-25 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of MS027238 vs. ExPASy TrEMBL
Match: A0A251MXS3 (Protein kinase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G139600 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.0e-25 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 0
BLAST of MS027238 vs. ExPASy TrEMBL
Match: A0A6P5TK14 (probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Prunus avium OX=42229 GN=LOC110767969 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 5.3e-25 Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 0
BLAST of MS027238 vs. ExPASy TrEMBL
Match: A0A6I9QX78 (putative receptor-like protein kinase At3g47110 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041449 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 0
BLAST of MS027238 vs. TAIR 10
Match: AT5G39390.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of MS027238 vs. TAIR 10
Match: AT3G47580.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.7e-18 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 0
HSP 2 Score: 42.7 bits (99), Expect = 3.0e-04 Identity = 15/40 (37.50%), Postives = 27/40 (67.50%), Query Frame = 0
BLAST of MS027238 vs. TAIR 10
Match: AT5G20480.1 (EF-TU receptor ) HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17 Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0
HSP 2 Score: 42.7 bits (99), Expect = 3.0e-04 Identity = 18/37 (48.65%), Postives = 27/37 (72.97%), Query Frame = 0
BLAST of MS027238 vs. TAIR 10
Match: AT3G47570.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 78.6 bits (192), Expect = 4.9e-15 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0
HSP 2 Score: 38.1 bits (87), Expect = 7.3e-03 Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 0
BLAST of MS027238 vs. TAIR 10
Match: AT3G47110.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 77.8 bits (190), Expect = 8.3e-15 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 0
HSP 2 Score: 40.8 bits (94), Expect = 1.1e-03 Identity = 17/40 (42.50%), Postives = 25/40 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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