Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAGCCGCCGAAGCGTATCTTCAGATGCAAGATCGGTGAGCACTATTAATAGATCTTTTAAAAGATCTGAATCCATGCGAGCGTCAGTAGACTTTACTCACCCGATCCCTGACGTTCAATATGAAGAAGGATCACTCTCTCCAACTCAATCCGACATGGAAAGGAGAACTGAATCCGCCTTCAATCAAATAAACGTGATCTCAAAACCTGAGAAACGTTATGAAGAACTATACAGCAAGTACATCGATATGTGGATTGCTGCACCAAAAGAAACAAGAAAACCTGTCATGACCCTTGGCGATTTCACTTCAAAGATACAAGAACGAGAGCTAGTTAAGAACGAAGCTCTAGTCAAAAAACTCCAGGCTGATGGACAGGTAGCAGTTATCAGGAATGGCACTGTTTGGGTCACTGCAAGAGGCAAAGAAATAGCTTCCACCTTCCCTCCAGAAGAAGAAGCTTCCTTCTCTCATGAAGACAAAGTCCAGAAAGTTGGTGTTAGTATCTAA
mRNA sequence
ATGAGCAGCCGCCGAAGCGTATCTTCAGATGCAAGATCGGTGAGCACTATTAATAGATCTTTTAAAAGATCTGAATCCATGCGAGCGTCAGTAGACTTTACTCACCCGATCCCTGACGTTCAATATGAAGAAGGATCACTCTCTCCAACTCAATCCGACATGGAAAGGAGAACTGAATCCGCCTTCAATCAAATAAACGTGATCTCAAAACCTGAGAAACGTTATGAAGAACTATACAGCAAGTACATCGATATGTGGATTGCTGCACCAAAAGAAACAAGAAAACCTGTCATGACCCTTGGCGATTTCACTTCAAAGATACAAGAACGAGAGCTAGTTAAGAACGAAGCTCTAGTCAAAAAACTCCAGGCTGATGGACAGGTAGCAGTTATCAGGAATGGCACTGTTTGGGTCACTGCAAGAGGCAAAGAAATAGCTTCCACCTTCCCTCCAGAAGAAGAAGCTTCCTTCTCTCATGAAGACAAAGTCCAGAAAGTTGGTGTTAGTATCTAA
Coding sequence (CDS)
ATGAGCAGCCGCCGAAGCGTATCTTCAGATGCAAGATCGGTGAGCACTATTAATAGATCTTTTAAAAGATCTGAATCCATGCGAGCGTCAGTAGACTTTACTCACCCGATCCCTGACGTTCAATATGAAGAAGGATCACTCTCTCCAACTCAATCCGACATGGAAAGGAGAACTGAATCCGCCTTCAATCAAATAAACGTGATCTCAAAACCTGAGAAACGTTATGAAGAACTATACAGCAAGTACATCGATATGTGGATTGCTGCACCAAAAGAAACAAGAAAACCTGTCATGACCCTTGGCGATTTCACTTCAAAGATACAAGAACGAGAGCTAGTTAAGAACGAAGCTCTAGTCAAAAAACTCCAGGCTGATGGACAGGTAGCAGTTATCAGGAATGGCACTGTTTGGGTCACTGCAAGAGGCAAAGAAATAGCTTCCACCTTCCCTCCAGAAGAAGAAGCTTCCTTCTCTCATGAAGACAAAGTCCAGAAAGTTGGTGTTAGTATCTAA
Protein sequence
MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQYEEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSHEDKVQKVGVSI
Homology
BLAST of MS027134 vs. NCBI nr
Match:
KAA0059217.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46
Identity = 111/187 (59.36%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. NCBI nr
Match:
TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 196.1 bits (497), Expect = 2.5e-46
Identity = 111/187 (59.36%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. NCBI nr
Match:
KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 195.7 bits (496), Expect = 3.3e-46
Identity = 110/187 (58.82%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPD+ Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDIHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. NCBI nr
Match:
KAA0037876.1 (zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 194.1 bits (492), Expect = 9.6e-46
Identity = 111/187 (59.36%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 122 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 181
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 182 EPVYNQINVISNDKERSREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 241
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 242 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 301
BLAST of MS027134 vs. NCBI nr
Match:
TYK01213.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 192.6 bits (488), Expect = 2.8e-45
Identity = 109/189 (57.67%), Postives = 136/189 (71.96%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS ARS S+ + +RSES+RAS+DF+ IP V Y E+ SLSPTQSDMERRT
Sbjct: 307 MSSRPSTSSIARSESSFPDTLRRSESIRASMDFSRSIPTVHYKKEDESLSPTQSDMERRT 366
Query: 61 ESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNE 120
E +NQINVIS E R++E YSKY+DMW+AAP ETRKP + + DF + ++++E KNE
Sbjct: 367 EPVYNQINVISSNEDNDRFQEYYSKYLDMWLAAPAETRKPFLPMPDFIAGLKQKEKAKNE 426
Query: 121 ALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH----------------- 169
ALVK+L+ADGQVA+I+ TVWVTA+GKEIAS +PPE EA F+H
Sbjct: 427 ALVKRLEADGQVAMIKGSTVWVTAKGKEIASNYPPEGEAYFAHPIIPAIKMVSSPYKTID 486
BLAST of MS027134 vs. ExPASy TrEMBL
Match:
A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46
Identity = 111/187 (59.36%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. ExPASy TrEMBL
Match:
A0A5A7UX67 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001460 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46
Identity = 111/187 (59.36%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. ExPASy TrEMBL
Match:
A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)
HSP 1 Score: 195.7 bits (496), Expect = 1.6e-46
Identity = 110/187 (58.82%), Postives = 132/187 (70.59%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPD+ Y E+GSLSPTQSDMERR+
Sbjct: 310 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDIHYEKEDGSLSPTQSDMERRS 369
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R+ E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 370 EPVYNQINVISNDKERFREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 429
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 430 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 489
BLAST of MS027134 vs. ExPASy TrEMBL
Match:
A0A5A7T6R6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00430 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 4.7e-46
Identity = 111/187 (59.36%), Postives = 131/187 (70.05%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS +S ++ + +RSES+RASVDF+H IPDV Y E+GSLSPTQSDMERR+
Sbjct: 122 MSSRPSTSS-IKSEASYRETLRRSESIRASVDFSHTIPDVHYEKEDGSLSPTQSDMERRS 181
Query: 61 ESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNEAL 120
E +NQINVIS ++R E YS YID WI AP ETRKP +T+ DF + + E KNEAL
Sbjct: 182 EPVYNQINVISNDKERSREHYSVYIDQWIKAPAETRKPFLTMPDFVEGMLKVERAKNEAL 241
Query: 121 VKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------ED 169
KKLQADGQVA+I+ TVWVTA GKE+AS +PPEEEA FSH ED
Sbjct: 242 AKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMVSSPYKTINED 301
BLAST of MS027134 vs. ExPASy TrEMBL
Match:
A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45
Identity = 109/189 (57.67%), Postives = 136/189 (71.96%), Query Frame = 0
Query: 1 MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRT 60
MSSR S SS ARS S+ + +RSES+RAS+DF+ IP V Y E+ SLSPTQSDMERRT
Sbjct: 307 MSSRPSTSSIARSESSFPDTLRRSESIRASMDFSRSIPTVHYKKEDESLSPTQSDMERRT 366
Query: 61 ESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQERELVKNE 120
E +NQINVIS E R++E YSKY+DMW+AAP ETRKP + + DF + ++++E KNE
Sbjct: 367 EPVYNQINVISSNEDNDRFQEYYSKYLDMWLAAPAETRKPFLPMPDFIAGLKQKEKAKNE 426
Query: 121 ALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH----------------- 169
ALVK+L+ADGQVA+I+ TVWVTA+GKEIAS +PPE EA F+H
Sbjct: 427 ALVKRLEADGQVAMIKGSTVWVTAKGKEIASNYPPEGEAYFAHPIIPAIKMVSSPYKTID 486
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0059217.1 | 2.5e-46 | 59.36 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| TYJ97599.1 | 2.5e-46 | 59.36 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0056776.1 | 3.3e-46 | 58.82 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0037876.1 | 9.6e-46 | 59.36 | zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var... | [more] |
| TYK01213.1 | 2.8e-45 | 57.67 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BEY3 | 1.2e-46 | 59.36 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... | [more] |
| A0A5A7UX67 | 1.2e-46 | 59.36 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... | [more] |
| A0A5A7UR29 | 1.6e-46 | 58.82 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... | [more] |
| A0A5A7T6R6 | 4.7e-46 | 59.36 | Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v... | [more] |
| A0A5A7VKK8 | 1.4e-45 | 57.67 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
