MS026967 (gene) Bitter gourd (TR) v1

Overview


Name	MS026967
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	E3 ubiquitin protein ligase DRIP2-like
Location	scaffold1038: 117927 .. 119054 (-)
RNA-Seq Expression	MS026967
Synteny	MS026967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCCTTTTGGAGATGACTCAGATTGGCTACACTTGGGATTGGGATTCACAGCCCCAACAAAAGAAGAAGAAAAAGAGGAAAAATATTTGGCAACTCCTCACCATTTGGAAGAAGTGGGCAATTTGGATTTAAGGTTAAAAATAGGGTCTCCTAAAAGGAAGAATTTGATGCATCACAAGGACAAAGCTTTGCCATTCTTCCACCATGGCTACCTCAAAAATGTGCCGCTTCCTATTCCTCACTCTCCTCCCCTTTCATCTCCCACCTCGGGTTTGTGGTTCGCACTCCACTCCTCGCCAAACAGGTGACACCCTCGAACAATCCTGAGGCTTTTTTTACGATTTTTCATATTTTCATGGGTTCGATATCAATAGAAATATCAAGGAACATGTAACCAAATATTAATTCACTCTTAAATCCCTTTTTTGTGACTATTTTTCTTTTTAGGTTTGTCTTTGTTTATAAAAGAAAATGATCACGAAACAATAGCATAGTTTTTAAAAACATAAAACAAAAATACGATATCGTTATCAAGCAAGACCTTCATTTTTATAATATTTCTTGATAAATTTACATATAACATTTCTACGAAATTGAAACCGTTCGATATCGTGGACTCTAATTTAAAGAAAAAATTGATAGAATCGAAGGGTTTTGAATGTTTTTAATGATGGATTATTAAATATAGTTGTGTTCTTTTCACTGGTTATGTGATTATAGGGAGGGAGGAGGAGCACTGCCACAGATACCAAAGGCTTACATAAGAGTGAAGTAAGTGGGACAAACCATTAATTAACACTTAATTAGTGCATTTTACTTAAAATATGTTAGAAACTAAAACACCATTTAAGAAATAAAAAAAAAAGTTATTATATTATTATTATTATTATTTTTAATTTGATATGAAATCTAATGATGAGGAATGCAGTGGGAAAAGGAAAAGGCAAAGGCTGATTGTTTTCCCTTTTGGACTTTTGGTGATGTAACTGTTTAGGGATGAGAACATGACAGTGTTCATGGTGAAGAAGTACTTGGTCATAAAGCTTGGTCTCTCCAATGAAGCTGAGGTAACATACCATACCATAACAAAGCTTTATGATTATACATCACTACAAATTTAG

mRNA sequence

ATGGCTTCCCCTTTTGGAGATGACTCAGATTGGCTACACTTGGGATTGGGATTCACAGCCCCAACAAAAGAAGAAGAAAAAGAGGAAAAATATTTGGCAACTCCTCACCATTTGGAAGAAGTGGGCAATTTGGATTTAAGGTTAAAAATAGGGTCTCCTAAAAGGAAGAATTTGATGCATCACAAGGACAAAGCTTTGCCATTCTTCCACCATGGCTACCTCAAAAATGTGCCGCTTCCTATTCCTCACTCTCCTCCCCTTTCATCTCCCACCTCGGGTTTGTGGTTCGCACTCCACTCCTCGCCAAACAGGGAGGGAGGAGGAGCACTGCCACAGATACCAAAGGCTTACATAAGAGTGAAGGATGAGAACATGACAGTGTTCATGGTGAAGAAGTACTTGGTCATAAAGCTTGGTCTCTCCAATGAAGCTGAGGTAACATACCATACCATAACAAAGCTTTATGATTATACATCACTACAAATTTAG

Coding sequence (CDS)

ATGGCTTCCCCTTTTGGAGATGACTCAGATTGGCTACACTTGGGATTGGGATTCACAGCCCCAACAAAAGAAGAAGAAAAAGAGGAAAAATATTTGGCAACTCCTCACCATTTGGAAGAAGTGGGCAATTTGGATTTAAGGTTAAAAATAGGGTCTCCTAAAAGGAAGAATTTGATGCATCACAAGGACAAAGCTTTGCCATTCTTCCACCATGGCTACCTCAAAAATGTGCCGCTTCCTATTCCTCACTCTCCTCCCCTTTCATCTCCCACCTCGGGTTTGTGGTTCGCACTCCACTCCTCGCCAAACAGGGAGGGAGGAGGAGCACTGCCACAGATACCAAAGGCTTACATAAGAGTGAAGGATGAGAACATGACAGTGTTCATGGTGAAGAAGTACTTGGTCATAAAGCTTGGTCTCTCCAATGAAGCTGAGGTAACATACCATACCATAACAAAGCTTTATGATTATACATCACTACAAATTTAG

Protein sequence

MASPFGDDSDWLHLGLGFTAPTKEEEKEEKYLATPHHLEEVGNLDLRLKIGSPKRKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEVTYHTITKLYDYTSLQI

Homology

[Close]

BLAST of MS026967 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-21
Identity = 71/164 (43.29%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 10  DWLHLGLGFTAPTKE----EEKEEKYLA------------TPHHLEEVGNLDLRLKIGSP 69
           +WL L LG  +  KE    +EKE++  +            T H   E  NLDLRL+IG  
Sbjct: 8   EWLELSLGLGSTGKEQLQKQEKEDEKRSRLYQEKLVICGTTSHEESEYVNLDLRLQIGPN 67

Query: 70  KRKN---------LMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSPTSGLWFALHSSPNR 129
            + N         ++ H+ K    FH  Y             + + ++GLWF+L SSPNR
Sbjct: 68  NKSNYCNMGIRDFMLQHQSKK-KHFHSDY-----------SSIITNSAGLWFSLLSSPNR 127

Query: 130 EGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEVTY 149
           +GG ALPQIPK YIRVKDE MTV MVKKYL+ KLGLSN+AE+ Y
Sbjct: 128 KGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAELDY 159

[Close]

BLAST of MS026967 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.1 bits (279), Expect = 4.6e-21
Identity = 77/160 (48.12%), Postives = 94/160 (58.75%), Query Frame = 0


Query: 1   MASPFGDDSDWLHLGLGFTAPTKEEEKEEKYLATPHHLEEVG---NLDLRLKIGSPKR-- 60
           M SP     +WL L LG    TK++++E K      +L+E G   +L LRL+IG PK   
Sbjct: 1   MGSP--GSKEWLELSLGLRG-TKKKQEEAKKEEDEMNLDEEGEGSSLSLRLQIG-PKYFD 60

Query: 61  -----KNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSP----TSGLWFALHSSPNREG 120
                   M  ++     FH   L N     PH   LSSP     +GLWF+L SSPNR+G
Sbjct: 61  TNMGIMGFMSTQNNQKWAFHSHSLTN----FPHFHGLSSPPPPNPAGLWFSLRSSPNRKG 120

Query: 121 GGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           G  LPQIPKAYIRVKDE MTV MVKKYL+ KLGLS++AEV
Sbjct: 121 GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

[Close]

BLAST of MS026967 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 77/160 (48.12%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MASPFGDDSDWLHLGLGFTAPTKEEEKEEKYLATPHHLEEVG---NLDLRLKIGSPK--- 60
           M SP     +WL L LG    TK++++E K      +L E G   +L LRL+IG PK   
Sbjct: 1   MGSP--GSKEWLELSLGLRG-TKKKQEEAKKEEDEMNLGEEGEGSSLSLRLQIG-PKCFD 60

Query: 61  ----RKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSP----TSGLWFALHSSPNREG 120
                   M  ++     FH   L N     PH   LSSP     +GLWF+L SSPNR+G
Sbjct: 61  TNMGIMGFMSTQNNQKWAFHSHSLTN----FPHFHGLSSPPPPNPAGLWFSLRSSPNRKG 120

Query: 121 GGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           G  LPQIPKAYIRVKDE MTV MVKKYL+ KLGLS++AEV
Sbjct: 121 GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

[Close]

BLAST of MS026967 vs. NCBI nr
Match: TYG99320.1 (hypothetical protein ES288_A10G186800v1 [Gossypium darwinii])

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-18
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   +  +P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 144 GSFNDWQVPVPNNSHHYIPRNRPHSGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTI 203

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 204 FMVKKYLVRKLGLSNEAEV 222

[Close]

BLAST of MS026967 vs. NCBI nr
Match: XP_040934862.1 (uncharacterized protein LOC107896001 isoform X1 [Gossypium hirsutum] >KAG4180258.1 hypothetical protein ERO13_A10G156466v2 [Gossypium hirsutum])

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-18
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   +  +P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 144 GSFNDWQVPVPNNSHHYIPRNRPHSGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTI 203

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 204 FMVKKYLVRKLGLSNEAEV 222

[Close]

BLAST of MS026967 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 52  SPKRKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSPTSGLWFALHSSPNREGGGALP 111
           +PKR      K  A      G  +N+P P   S         +WF+L +S ++EGG +LP
Sbjct: 272 TPKRMRTTQRKRSATTL---GDSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLP 331

Query: 112 QIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           QIP  ++R++D N TV  ++KYL+ KL L +E E+
Sbjct: 332 QIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 363

[Close]

BLAST of MS026967 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 85  PPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEA 144
           P   +  +G+WF L ++P +     LPQIP++Y+R+KD  +TV ++ KYLV KLGL +E+
Sbjct: 278 PSAVAAAAGVWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDES 337

Query: 145 EV 147
           EV
Sbjct: 338 EV 339

[Close]

BLAST of MS026967 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 94  LWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           +WF+L +S N+EG  +LPQIP  Y+R++D N+ V  ++KYL+ KL L +E EV
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEV 362

[Close]

BLAST of MS026967 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.7e-06
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 94  LWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           +WF+L  S  +     LP I    IRVKD NMTV  +KKYL++KLGL +E +V
Sbjct: 365 VWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQV 417

[Close]

BLAST of MS026967 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 8.4e-21
Identity = 77/160 (48.12%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 1   MASPFGDDSDWLHLGLGFTAPTKEEEKEEKYLATPHHLEEVG---NLDLRLKIGSPK--- 60
           M SP     +WL L LG    TK++++E K      +L E G   +L LRL+IG PK   
Sbjct: 1   MGSP--GSKEWLELSLGLRG-TKKKQEEAKKEEDEMNLGEEGEGSSLSLRLQIG-PKCFD 60

Query: 61  ----RKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSP----TSGLWFALHSSPNREG 120
                   M  ++     FH   L N     PH   LSSP     +GLWF+L SSPNR+G
Sbjct: 61  TNMGIMGFMSTQNNQKWAFHSHSLTN----FPHFHGLSSPPPPNPAGLWFSLRSSPNRKG 120

Query: 121 GGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           G  LPQIPKAYIRVKDE MTV MVKKYL+ KLGLS++AEV
Sbjct: 121 GAPLPQIPKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEV 152

[Close]

BLAST of MS026967 vs. ExPASy TrEMBL
Match: A0A6P4PK13 (uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108478946 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   +  +P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 147 GSFNDWQVPVPNNSHHYIPRNRPHSGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTI 206

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 207 FMVKKYLVRKLGLSNEAEV 225

[Close]

BLAST of MS026967 vs. ExPASy TrEMBL
Match: A0A5D2F0S3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G186800v1 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   +  +P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 144 GSFNDWQVPVPNNSHHYIPRNRPHSGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTI 203

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 204 FMVKKYLVRKLGLSNEAEV 222

[Close]

BLAST of MS026967 vs. ExPASy TrEMBL
Match: A0A5D2XMI8 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G171700v1 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.9e-18
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   +  +P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 144 GSFNDWQVPVPNNSHHYIPRNRPHSGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTI 203

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 204 FMVKKYLVRKLGLSNEAEV 222

[Close]

BLAST of MS026967 vs. ExPASy TrEMBL
Match: A0A5D2J5P4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G130900v1 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 72  GYLKNVPLPIP----HSPPLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTV 131
           G   + P+P+P    H  P + P SGLWF LHS  NR  G ALPQIPKAYIRVKDEN+T+
Sbjct: 140 GCFNDWPVPVPNNSHHYIPRTRPHSGLWFTLHSYTNR-NGEALPQIPKAYIRVKDENVTI 199

Query: 132 FMVKKYLVIKLGLSNEAEV 147
           FMVKKYLV KLGLSNEAEV
Sbjct: 200 FMVKKYLVRKLGLSNEAEV 217

[Close]

BLAST of MS026967 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 52  SPKRKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSPTSGLWFALHSSPNREGGGALP 111
           +PKR      K  A      G  +N+P P   S         +WF+L +S ++EGG +LP
Sbjct: 272 TPKRMRTTQRKRSATTL---GDSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLP 331

Query: 112 QIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           QIP  ++R++D N TV  ++KYL+ KL L +E E+
Sbjct: 332 QIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 363

[Close]

BLAST of MS026967 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 52  SPKRKNLMHHKDKALPFFHHGYLKNVPLPIPHSPPLSSPTSGLWFALHSSPNREGGGALP 111
           +PKR      K  A      G  +N+P P   S         +WF+L +S ++EGG +LP
Sbjct: 158 TPKRMRTTQRKRSATTL---GDSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLP 217

Query: 112 QIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           QIP  ++R++D N TV  ++KYL+ KL L +E E+
Sbjct: 218 QIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEI 249

[Close]

BLAST of MS026967 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 86  PLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAE 145
           P   P SG+WF L +S N+     LPQIPK+Y+R+KD  MTV ++ KYLV KL L +E++
Sbjct: 268 PPRRPHSGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQ 327

[Close]

BLAST of MS026967 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 )

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 94  LWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAEV 147
           +WF+L +S N+EG  +LPQIP  Y+R++D N+ V  ++KYL+ KL L +E EV
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEV 362

[Close]

BLAST of MS026967 vs. TAIR 10
Match: AT1G28080.1 (RING finger protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 86  PLSSPTSGLWFALHSSPNREGGGALPQIPKAYIRVKDENMTVFMVKKYLVIKLGLSNEAE 145
           P   P SGLWF L +S  +E    LPQ+ K+Y+R+KD  +TV ++ KYL+ KL L +E+E
Sbjct: 229 PPRRPHSGLWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESE 288

Query: 146 V 147
           V
Sbjct: 289 V 289

The following BLAST results are available for this feature:

BLAST of MS026967 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652308.1	4.6e-21	43.29	hypothetical protein Csa_022227 [Cucumis sativus]	[more]
KAG6571319.1	4.6e-21	48.13	Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931988.1	1.7e-20	48.13	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
TYG99320.1	8.1e-18	65.82	hypothetical protein ES288_A10G186800v1 [Gossypium darwinii]	[more]
XP_040934862.1	8.1e-18	65.82	uncharacterized protein LOC107896001 isoform X1 [Gossypium hirsutum] >KAG4180258...	[more]

BLAST of MS026967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9Y4	1.4e-09	36.84	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
G3XKQ9	1.6e-08	45.16	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
Q94AY3	7.9e-08	49.06	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
Q9LS86	9.7e-06	49.06	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of MS026967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0B3	8.4e-21	48.13	protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV...	[more]
A0A6P4PK13	3.9e-18	65.82	uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 G...	[more]
A0A5D2F0S3	3.9e-18	65.82	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G186800v1 PE=...	[more]
A0A5D2XMI8	3.9e-18	65.82	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G171700v1 P...	[more]
A0A5D2J5P4	1.5e-17	67.09	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G130900v1 P...	[more]

BLAST of MS026967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06770.1	1.0e-10	36.84	DREB2A-interacting protein 1	[more]
AT1G06770.2	1.0e-10	36.84	DREB2A-interacting protein 1	[more]
AT5G13250.1	3.9e-10	50.00	RING finger protein	[more]
AT2G30580.1	5.6e-09	49.06	DREB2A-interacting protein 2	[more]
AT1G28080.1	1.3e-08	47.54	RING finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044171	Protein LAX PANICLE 2-like	PANTHER	PTHR47290	RING FINGER PROTEIN	coord: 86..148
None	No IPR available	PANTHER	PTHR47290:SF6	SUBFAMILY NOT NAMED	coord: 86..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026967.1	MS026967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development