MS026385 (gene) Bitter gourd (TR) v1

Overview


Name	MS026385
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AUGMIN subunit 2-like
Location	scaffold459: 1900775 .. 1905649 (-)
RNA-Seq Expression	MS026385
Synteny	MS026385

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGGGAAACGATACCACTTGGGTAGGAAAGAAACCTCTGAGGCGCATTGGAGGAATGTCCGATGCTCTCTCCATTGCCGCTGATCTCGGTTTCTCTGTCTCTCCTCCCCCTTCGCAGGTCGCTCTTTCTTCTATCTCTGTCTGTTTATACATTTCACAGGTCTTCCATTTATCGCTCGTTCAGGTTCTTTGTCTGTGTACTTATGATGCAATTCGGTTTAAATTTAAAGCTGTAATTACCTATCCTCTCAGTTTCTCCCCTTTGTTTATTTCTGCTGCAAATTTCTGATACATGAAGTTTTGAACCCGTGGTTGATCGTGGATGTTGTTAAAGAATTTAATAGGTGAATGCGTGTTGCGAATTAGTTTTTTGGAAATGGTGTAGAGCTCTCGACCCGCCTGTTGAATTGGAGATTTAGATCTCAGGGTGATTAGGCATAACTTGGATTTGAATTTTGAATTCTGGAACTTGGTAAATTTATCAAGTAATCATTATTAAAGGGAAATTGTATTTTTCATTACATTAGAAAGCGAGGTCAATGTTTACCGGCCTCTTCACTGGTCGAGAATGAATGTGTATTGCAAGAGTACACCTGGGCTGAATTTTGGCAATACATTTAAAAGATATCTTGCCTGTATATTCTTGCCTGGCTTATAAACCACTATTTTTTGGTAAAGATGCTGGCTGAACAGAAAGGGCCCATCTCTCTCGGAGGGAAATATCCCCAATATACTGTACATCCTTTAAGAATTCTTCCTAAAATCATGAGTGGGGTTCTTTGGGAAAACTGGAAGGCATCTGGGGGTGGCATGGGGTTCCAATTAGACCAATGGGCTAAAATTTCTTATCCGAAAGATTTTGGAAACCAAGGCCCTGGTAGAATTTGTGTGAAAGAACACTACCCTCTCGAGGAAAATGGTTATGGAGATTTTCATATTGACTATCTTTCCTCATGACATTGAGTTATTGCCTGCAAGTGTCGTGTAAACTTATTTGGGTTGGATATGAAAATGGTGGGACGGAGTAACCACTGTCCTCGGCCTTTTATCCATAAGACTAGTTGTTATTTAAAGTCCTGTTTCATTTCTGCATAGACCATGGAAAAAGATCAGATTATAGAAGGACACTTGATATTGCTTCGATCGTTCCTCCTTCTACAGGTGACTCTTTGCTACAGTGGCCCTTGGTCTAAGGGAAAACCTACAATCAATTGGTACAGCTCTAACATACTATCTTGTGGATGATTTAGAGATGGGAATATGGAGAATTTTTGGGACAAAAAAGAGTGACGGGTGTTTCTTGGGGATCATGTACCAAAGGGCTTTATAATTTATTCTATTTGCTTGATTTTGGCGGTGGAGAATTCTTTGTAATCTACTGAACCACCTGTGTTAGGAATGGTCATCCAATCCTCCCTCCCATCTCTTTGTATACCTTTGTAATCTACTAAACCACCTTTGTTAGGAATGGACCGAATGGTCATCCTATCCTCCCTCCCATCTTTGGTATGCCTTTTATCTTTAACACATTTCTTGGCTTTAGACAAGTGAAGCCAAGAAATTCTTAGGGCTATGTTAATTCTTACCAATAAAATCTATTTCAAGCTCAAAGTGCCTGGTCATGGCAAATTTTCTCTTTCAACTTTGCTAATTTGCTTGTTATAGTGGGTTATTTGAGTTCTCTGGTTCAATTAATACAACTTGGTAACTTTAAATTCGGAACTTTATAACCTGAAATTTTAAATGGGATAATCTGTCCTCTTTAGGAAGAACTACAAAACGTATCATCCACCACAGGTGAAAATGGTGATGATCTAATTAAAGTTTTACGAGAACTTACTGCCGTTCAAAGGAAAATAGCAGATCTTCAAGTGGAACTTCAAGGTCGTAAAGTGAGTATCCTGTGCTTCTGTCAATTTCAACTTTTAATGTGTATGAAGTTTTCAGCGTCAAAATAGGATAAAATTATACTTGTTCATTGTTAATTCGTATATTTTATATTCGTTATTGTACTAAATGAATTGAAATATGATTTCCTTAGGATGACAAAAATGTAGCCCATTTGACACATGTGAGTGAAATGGAAAAGAAGATCGAGACTTTATCAAGGATTACTACCATTTTGAAAGATGTCATCCAGAATAAGGTGCTTTCTTGAACTATGATTCTCAACCCTGTATATTTTGCCATCTTGGCGTGGATTTGAATCATGTTTCAATGCCTTGTGCTTTTAACCTCTTTTTTCTTATCTCCGACCTCCACATTTTGGTGGGGAGGCCTCAACTAAATGGTATGTTTAATTTCATGATAATTCTTGATTACTTTACTTCTATACTCCAATTCATCAGGTGGTCCTCTAGAATTGGTTGATCATTCCATCATAACGTGTGAACTATGAAATTGATCGTTCTATATTTCTGAGAAATTTTCGATTCAGTTGAGCTTTCTTTTCCAATAATACAAACTTGTTCTTGGGAAAATCTGGCAGAAAGAGGTATTGGCCATCCTTTCTGCCTTTTTTTACCCTTGCTTTAATGAGTATTGGATAGTTGCAGCGTATATTTACTGATCCTTTCAGGAAGAAATTCTTTGTTGAGGCCATGTTTCTTTAAAAGTATTAGTGCTTTTAGGACTTGAAATGTGGTACGATTACCTAGAGACTTTCAATATGCTTATTCGTTGCTTCTAGTCATTGCACTGCTTTAGTTTACCAGTCCTCATTTGTGAAGATTATATTGCAGTACTCAAGGAAATGTTATGGAACTACCTTGAGAGAAACTTTCTGTCTAAGATGACTTCTTTAAGCCTAGGTGGGAACTTATGTAAGTAGTATTTAGTAATTGTGAAAGCAAGTGCCGCCTGATCTGTAGAAAGTTCATTTGCCTCGCAAGACAAGGTCATCAACTGCTGATGCTTTTTTTCCCCCTTGCATGTCGAGGATTTGACTGGCATGACCACTGCTGAAATCATTACTTTATTTGCTCTAGCATACTCTTTTTCCCTTTTTTGGATACATTTTGTCTTGGACCTGCTATAAAAGTTAATTACACCGAGTGCAGATCTAGAGTGATTCGTCATTTTCTAATGAATTATGGAGAGAGCTGAGAGAAATTAATTGGAAATTAGTTGAAATTTGGATTGCTTTGATATTTTCGTCAACTTTGGTTAATTGTTAAAATTAATCTCTATAGTCTCGGCTTCCCTAGTAAGATCTCATCACTAGAGATGTGAGATGTTACTTGTCAACTTGAGAAATTTTGAGAGTAAATAATGATTTTTCAATAAGGAAGAATGGTTGAAAGATTTTTATTATAGCTGTAGATAGGAAAACATGTACCCTGCAAAGTATGTATATTATCTCACATGTTCTATTTGTAGTATGCTTTTGAATCTTTGATTGCTTCTTTTTGCCCAAGTTCCAAGTTCTAACCATAAAAATTTGTGCTGATTGATATTGCATGGTAACTTGTCGCTTCTTATCTCAATGCCTTTTCTTTTTTACTTTTTCTTTTCCCTTTTAAATGAAGCTCATAGATTCTAATTTTGATATTTATAAAAGTGGGTAACCAATTAAAAGAATCAAATTTAGAGACTAAAATGAAAATCAAGTTAAATTTCAGGATTAAATAATATTTAACATTTTTATTGTAAAAGTTTCTCATGTATTTCCTTCCAATGTTAATGAGCCTATTTAGCTCTTAAAAGTTCTATGCCCCACACATGTCCCAATTATTTCCTGGCTTTGATTGGTCAGAATTCCTTAGCCCCGAGAGTGCATCCATGCATCCTACATTATATCGATAGATAAATAATTCTAGTGCCATGATATCTTCTTTATCTTATTTTCCTCATTTCCAAATACTGCAGGATCGTATTATAGCTCGTCTTCAGCAACCATATTCACTCGATTGCATTCCAGTAGAAGCAGAATTTCAGGTTTGTCAATCAGTAAATGCTTATCATTCCTTGAAAATCCATGCCATAAAATTTTCCAGTATTTGAGGCGACTGGATGTCGGTAACATCCCTTGACTTGTTTCACTCGGATTATGAGAAAATGTCACATGAAATTCAACCAGAACATGAACTCTAATATTTTTCTCTTTGTTCACTTTTCCAAAAACAATTCTATTGATCATCCAAAACAGCCAAAACTGGAACACCCTACCATTCCATAAAGTTCTGGCTGTTTCATTGACAAACTCTTCATCATGAAGTTATGATCATGTGATCAGGCAGTGAAAGGAAGTTTGAAATCTGTGTGGCGTTGTTTTGTATTTTCTGCTTCTGATTAGTTTGAGATTCTGCCGGAGGTAGCTAATCATGTGACTGACTGACAAATGACAATGCTCGATGTCGATGTTTTGCAGAAACAATTCTCCGAGTTACTGATGAAGGCTGCCAGTGATTATGGAGCTTTGACAGCTTCAGTTGCAGATTTCCAATGGAGTCAGAACTTTAAGGAGTCACCTTCAGTGTGGGGGGTAAACTTTAATCATCTCTGCTCTATCTAATTTCATGTTGCCGCAAGCAAATGAAGCTCTGCTGTTCTAACTGAGGATGAAATGTCCATTTAGATTAAGAAAATTGGATCTTTTCCAATTCATTGAATTGTAGTCCATACTTTAACCAAAATTCTTTAATCTGTTTTACTAATGTAGGAAATGCTTAGGCCGATTCCTGTAGCTTTAGCTTCTTGCACTAGATTCTTTGAAGCCATGAGTGCTATGAGGGAATCGTTTGCAACACTACAAAATCTCAGAGTAGGTAATTCCAATTCATCTCTGCCCACAACCCTGCCTATCGATTCATCCCTTCGAGTGGCACACGATTCCGCCTGCATCACGCCGCCTCCATGGCGAACCGAATGA

mRNA sequence

ATGTCGATGGGAAACGATACCACTTGGGTAGGAAAGAAACCTCTGAGGCGCATTGGAGGAATGTCCGATGCTCTCTCCATTGCCGCTGATCTCGGTTTCTCTGTCTCTCCTCCCCCTTCGCAGGTCGCTCTTTCTTCTATCTCTGTCTGTTTATACATTTCACAGGTCTTCCATTTATCGCTCGTTCAGACCATGGAAAAAGATCAGATTATAGAAGGACACTTGATATTGCTTCGATCGTTCCTCCTTCTACAGGAAGAACTACAAAACGTATCATCCACCACAGGTGAAAATGGTGATGATCTAATTAAAGTTTTACGAGAACTTACTGCCGTTCAAAGGAAAATAGCAGATCTTCAAGTGGAACTTCAAGGTCGTAAAGATGACAAAAATGTAGCCCATTTGACACATGTGAGTGAAATGGAAAAGAAGATCGAGACTTTATCAAGGATTACTACCATTTTGAAAGATGTCATCCAGAATAAGGATCGTATTATAGCTCGTCTTCAGCAACCATATTCACTCGATTGCATTCCAGTAGAAGCAGAATTTCAGAAACAATTCTCCGAGTTACTGATGAAGGCTGCCAGTGATTATGGAGCTTTGACAGCTTCAGTTGCAGATTTCCAATGGAGTCAGAACTTTAAGGAGTCACCTTCAGTGTGGGGGGAAATGCTTAGGCCGATTCCTGTAGCTTTAGCTTCTTGCACTAGATTCTTTGAAGCCATGAGTGCTATGAGGGAATCGTTTGCAACACTACAAAATCTCAGAGTAGGTAATTCCAATTCATCTCTGCCCACAACCCTGCCTATCGATTCATCCCTTCGAGTGGCACACGATTCCGCCTGCATCACGCCGCCTCCATGGCGAACCGAATGA

Coding sequence (CDS)

ATGTCGATGGGAAACGATACCACTTGGGTAGGAAAGAAACCTCTGAGGCGCATTGGAGGAATGTCCGATGCTCTCTCCATTGCCGCTGATCTCGGTTTCTCTGTCTCTCCTCCCCCTTCGCAGGTCGCTCTTTCTTCTATCTCTGTCTGTTTATACATTTCACAGGTCTTCCATTTATCGCTCGTTCAGACCATGGAAAAAGATCAGATTATAGAAGGACACTTGATATTGCTTCGATCGTTCCTCCTTCTACAGGAAGAACTACAAAACGTATCATCCACCACAGGTGAAAATGGTGATGATCTAATTAAAGTTTTACGAGAACTTACTGCCGTTCAAAGGAAAATAGCAGATCTTCAAGTGGAACTTCAAGGTCGTAAAGATGACAAAAATGTAGCCCATTTGACACATGTGAGTGAAATGGAAAAGAAGATCGAGACTTTATCAAGGATTACTACCATTTTGAAAGATGTCATCCAGAATAAGGATCGTATTATAGCTCGTCTTCAGCAACCATATTCACTCGATTGCATTCCAGTAGAAGCAGAATTTCAGAAACAATTCTCCGAGTTACTGATGAAGGCTGCCAGTGATTATGGAGCTTTGACAGCTTCAGTTGCAGATTTCCAATGGAGTCAGAACTTTAAGGAGTCACCTTCAGTGTGGGGGGAAATGCTTAGGCCGATTCCTGTAGCTTTAGCTTCTTGCACTAGATTCTTTGAAGCCATGAGTGCTATGAGGGAATCGTTTGCAACACTACAAAATCTCAGAGTAGGTAATTCCAATTCATCTCTGCCCACAACCCTGCCTATCGATTCATCCCTTCGAGTGGCACACGATTCCGCCTGCATCACGCCGCCTCCATGGCGAACCGAATGA

Protein sequence

MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLSLVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFFEAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE

Homology

[Close]

BLAST of MS026385 vs. NCBI nr
Match: XP_022148260.1 (AUGMIN subunit 2-like [Momordica charantia])

HSP 1 Score: 462.2 bits (1188), Expect = 3.3e-126
Identity = 247/292 (84.59%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS                    
Sbjct: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGNSNSSLPTT PIDSSLRVAHDSACITPPPWRTE
Sbjct: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTPPIDSSLRVAHDSACITPPPWRTE 248

[Close]

BLAST of MS026385 vs. NCBI nr
Match: TYK14583.1 (AUGMIN subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 444.9 bits (1143), Expect = 5.4e-121
Identity = 238/293 (81.23%), Postives = 255/293 (87.03%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG+DTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQ     + +   + +   L+
Sbjct: 1   MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQF----LEILEEVDR--SLN 60

Query: 61  LVQTMEKDQIIEGHLI-LLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADL 120
            V+    D +  G +I +    +LL EELQN+SS  GE GDDLI+VLRELTAVQRKIADL
Sbjct: 61  WVKLSSNDLMKFGMMIDIAWMDILLPEELQNISSAIGEKGDDLIRVLRELTAVQRKIADL 120

Query: 121 QVELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIP 180
           QVELQGRKDDKNVAHLTHVSEMEKKIETLSRIT ILKDVIQNKDRIIARLQQPYSLDCIP
Sbjct: 121 QVELQGRKDDKNVAHLTHVSEMEKKIETLSRITAILKDVIQNKDRIIARLQQPYSLDCIP 180

Query: 181 VEAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF 240
           VEAE+QKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF
Sbjct: 181 VEAEYQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF 240

Query: 241 FEAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           FEAMSAMRESFATLQNLRVGN N SLPTT P+D SLRVA +S CITPPPWR+E
Sbjct: 241 FEAMSAMRESFATLQNLRVGNPNPSLPTTPPVDPSLRVASESDCITPPPWRSE 287

[Close]

BLAST of MS026385 vs. NCBI nr
Match: XP_022158478.1 (AUGMIN subunit 2-like [Momordica charantia])

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-120
Identity = 238/292 (81.51%), Postives = 242/292 (82.88%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG+DTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS                    
Sbjct: 1   MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLIKVLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIKVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGNS+SSLPTT PI+ SLRVA DS CITPPPWRTE
Sbjct: 241 EAMSAMRESFATLQNLRVGNSDSSLPTTPPINPSLRVAGDSDCITPPPWRTE 248

[Close]

BLAST of MS026385 vs. NCBI nr
Match: XP_022947042.1 (AUGMIN subunit 2-like [Cucurbita moschata])

HSP 1 Score: 442.2 bits (1136), Expect = 3.5e-120
Identity = 236/292 (80.82%), Postives = 241/292 (82.53%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG DTTWVGKKPLRRIGGMSDALSIAADLGFSV+PPPS                    
Sbjct: 1   MSMGGDTTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLI+VLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIRVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGN NSSLPTT PIDSS+RVA DS CITPPPWR+E
Sbjct: 241 EAMSAMRESFATLQNLRVGNPNSSLPTTPPIDSSVRVAGDSNCITPPPWRSE 248

[Close]

BLAST of MS026385 vs. NCBI nr
Match: XP_023533815.1 (AUGMIN subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.8 bits (1135), Expect = 4.6e-120
Identity = 235/292 (80.48%), Postives = 241/292 (82.53%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG DTTWVGKKPLRRIGGMSDALSIAADLGFSV+PPPS                    
Sbjct: 1   MSMGGDTTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLI+VLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIRVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGN NSSLPTT P+DSS+RVA DS CITPPPWR+E
Sbjct: 241 EAMSAMRESFATLQNLRVGNPNSSLPTTPPVDSSVRVAGDSNCITPPPWRSE 248

[Close]

BLAST of MS026385 vs. ExPASy Swiss-Prot
Match: O48767 (AUGMIN subunit 2 OS=Arabidopsis thaliana OX=3702 GN=AUG2 PE=1 SV=2)

HSP 1 Score: 383.3 bits (983), Expect = 2.5e-105
Identity = 209/292 (71.58%), Postives = 225/292 (77.05%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG DTTWVGKKP+RRIGG+SDALSIA+DLGF+V+PPPS                    
Sbjct: 1   MSMGGDTTWVGKKPIRRIGGLSDALSIASDLGFAVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQ+ +S+ GE GDDLI+VLREL+ VQRKIADLQ
Sbjct: 61  ------------------------QEELQSFASSNGERGDDLIRVLRELSVVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHV EM+KKIETLSRIT ILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVGEMQKKIETLSRITQILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAE+QKQFSELLMKAASDYGALTASV+DFQWSQNFKE PSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEYQKQFSELLMKAASDYGALTASVSDFQWSQNFKEPPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQ LRVGNS  SLPTT P  + +    DS C+TPP  R E
Sbjct: 241 EAMSAMRESFATLQELRVGNSAVSLPTT-PGGNEM-THRDSDCVTPPQGRIE 246

[Close]

BLAST of MS026385 vs. ExPASy TrEMBL
Match: A0A6J1D2F5 (AUGMIN subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111016966 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.6e-126
Identity = 247/292 (84.59%), Postives = 247/292 (84.59%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS                    
Sbjct: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGNSNSSLPTT PIDSSLRVAHDSACITPPPWRTE
Sbjct: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTPPIDSSLRVAHDSACITPPPWRTE 248

[Close]

BLAST of MS026385 vs. ExPASy TrEMBL
Match: A0A5D3CRS7 (AUGMIN subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00780 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.6e-121
Identity = 238/293 (81.23%), Postives = 255/293 (87.03%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG+DTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQ     + +   + +   L+
Sbjct: 1   MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQF----LEILEEVDR--SLN 60

Query: 61  LVQTMEKDQIIEGHLI-LLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADL 120
            V+    D +  G +I +    +LL EELQN+SS  GE GDDLI+VLRELTAVQRKIADL
Sbjct: 61  WVKLSSNDLMKFGMMIDIAWMDILLPEELQNISSAIGEKGDDLIRVLRELTAVQRKIADL 120

Query: 121 QVELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIP 180
           QVELQGRKDDKNVAHLTHVSEMEKKIETLSRIT ILKDVIQNKDRIIARLQQPYSLDCIP
Sbjct: 121 QVELQGRKDDKNVAHLTHVSEMEKKIETLSRITAILKDVIQNKDRIIARLQQPYSLDCIP 180

Query: 181 VEAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF 240
           VEAE+QKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF
Sbjct: 181 VEAEYQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRF 240

Query: 241 FEAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           FEAMSAMRESFATLQNLRVGN N SLPTT P+D SLRVA +S CITPPPWR+E
Sbjct: 241 FEAMSAMRESFATLQNLRVGNPNPSLPTTPPVDPSLRVASESDCITPPPWRSE 287

[Close]

BLAST of MS026385 vs. ExPASy TrEMBL
Match: A0A6J1DW74 (AUGMIN subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111024957 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 5.8e-121
Identity = 238/292 (81.51%), Postives = 242/292 (82.88%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG+DTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS                    
Sbjct: 1   MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLIKVLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIKVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGNS+SSLPTT PI+ SLRVA DS CITPPPWRTE
Sbjct: 241 EAMSAMRESFATLQNLRVGNSDSSLPTTPPINPSLRVAGDSDCITPPPWRTE 248

[Close]

BLAST of MS026385 vs. ExPASy TrEMBL
Match: A0A6J1G5C6 (AUGMIN subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111451038 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 236/292 (80.82%), Postives = 241/292 (82.53%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG DTTWVGKKPLRRIGGMSDALSIAADLGFSV+PPPS                    
Sbjct: 1   MSMGGDTTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLI+VLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIRVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGN NSSLPTT PIDSS+RVA DS CITPPPWR+E
Sbjct: 241 EAMSAMRESFATLQNLRVGNPNSSLPTTPPIDSSVRVAGDSNCITPPPWRSE 248

[Close]

BLAST of MS026385 vs. ExPASy TrEMBL
Match: A0A6J1I6N9 (AUGMIN subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469668 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.9e-120
Identity = 234/292 (80.14%), Postives = 241/292 (82.53%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG+DTTWVGKKPLRRIGGMSDALSIAADLGFSV+PPPS                    
Sbjct: 1   MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQN+SS TGE GDDLI+VLRELTAVQRKIADLQ
Sbjct: 61  ------------------------QEELQNISSATGEKGDDLIRVLRELTAVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQNLRVGN NSSLPTT P+D S+RVA DS CITPPPWR+E
Sbjct: 241 EAMSAMRESFATLQNLRVGNPNSSLPTTPPVDPSIRVAGDSNCITPPPWRSE 248

[Close]

BLAST of MS026385 vs. TAIR 10
Match: AT2G32980.1 (unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 383.3 bits (983), Expect = 1.8e-106
Identity = 209/292 (71.58%), Postives = 225/292 (77.05%), Query Frame = 0


Query: 1   MSMGNDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPPSQVALSSISVCLYISQVFHLS 60
           MSMG DTTWVGKKP+RRIGG+SDALSIA+DLGF+V+PPPS                    
Sbjct: 1   MSMGGDTTWVGKKPIRRIGGLSDALSIASDLGFAVAPPPS-------------------- 60

Query: 61  LVQTMEKDQIIEGHLILLRSFLLLQEELQNVSSTTGENGDDLIKVLRELTAVQRKIADLQ 120
                                   QEELQ+ +S+ GE GDDLI+VLREL+ VQRKIADLQ
Sbjct: 61  ------------------------QEELQSFASSNGERGDDLIRVLRELSVVQRKIADLQ 120

Query: 121 VELQGRKDDKNVAHLTHVSEMEKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPV 180
           VELQGRKDDKNVAHLTHV EM+KKIETLSRIT ILKDVIQNKDRIIARLQQPYSLDCIPV
Sbjct: 121 VELQGRKDDKNVAHLTHVGEMQKKIETLSRITQILKDVIQNKDRIIARLQQPYSLDCIPV 180

Query: 181 EAEFQKQFSELLMKAASDYGALTASVADFQWSQNFKESPSVWGEMLRPIPVALASCTRFF 240
           EAE+QKQFSELLMKAASDYGALTASV+DFQWSQNFKE PSVWGEMLRPIPVALASCTRFF
Sbjct: 181 EAEYQKQFSELLMKAASDYGALTASVSDFQWSQNFKEPPSVWGEMLRPIPVALASCTRFF 240

Query: 241 EAMSAMRESFATLQNLRVGNSNSSLPTTLPIDSSLRVAHDSACITPPPWRTE 293
           EAMSAMRESFATLQ LRVGNS  SLPTT P  + +    DS C+TPP  R E
Sbjct: 241 EAMSAMRESFATLQELRVGNSAVSLPTT-PGGNEM-THRDSDCVTPPQGRIE 246

The following BLAST results are available for this feature:

BLAST of MS026385 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148260.1	3.3e-126	84.59	AUGMIN subunit 2-like [Momordica charantia]	[more]
TYK14583.1	5.4e-121	81.23	AUGMIN subunit 2 [Cucumis melo var. makuwa]	[more]
XP_022158478.1	1.2e-120	81.51	AUGMIN subunit 2-like [Momordica charantia]	[more]
XP_022947042.1	3.5e-120	80.82	AUGMIN subunit 2-like [Cucurbita moschata]	[more]
XP_023533815.1	4.6e-120	80.48	AUGMIN subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS026385 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48767	2.5e-105	71.58	AUGMIN subunit 2 OS=Arabidopsis thaliana OX=3702 GN=AUG2 PE=1 SV=2	[more]

BLAST of MS026385 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2F5	1.6e-126	84.59	AUGMIN subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111016966 PE=4 SV=1	[more]
A0A5D3CRS7	2.6e-121	81.23	AUGMIN subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G007...	[more]
A0A6J1DW74	5.8e-121	81.51	AUGMIN subunit 2-like OS=Momordica charantia OX=3673 GN=LOC111024957 PE=4 SV=1	[more]
A0A6J1G5C6	1.7e-120	80.82	AUGMIN subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111451038 PE=4 SV=1	[more]
A0A6J1I6N9	4.9e-120	80.14	AUGMIN subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469668 PE=4 SV=1	[more]

BLAST of MS026385 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32980.1	1.8e-106	71.58	unknown protein; Has 158 Blast hits to 154 proteins in 73 species: Archae - 0; B...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
IPR028346	HAUS augmin-like complex subunit 2	PFAM	PF15003	HAUS2	coord: 84..252 e-value: 2.0E-81 score: 272.3
IPR028346	HAUS augmin-like complex subunit 2	PANTHER	PTHR16039	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 2	coord: 1..48 coord: 85..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026385.1	MS026385.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031023	microtubule organizing center organization
biological_process	GO:0051225	spindle assembly