MS026299 (gene) Bitter gourd (TR) v1

Overview


Name	MS026299
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Location	scaffold38: 369272 .. 372052 (-)
RNA-Seq Expression	MS026299
Synteny	MS026299

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGACGGCGACACAAAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCTGGAGGCCTGGACTCAGCCAGCCTCTGCCGTCGTTGAGACGCGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTAAAACCCTCGCTTCTCGTTTTCGACTTCTCCGATGCTTGCAATCGATTTGTTCGCTTGATTCGATCTCGCCGTCTCCTTTGTGTGGGTATTTTAGGTATACTGAGACGGGTTTTACGGTAAATGGAGTGGATTATGAAGGGAGCTTGCTCTGCGTTGGGAGCTTATTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCGGAGAGGTTTGCTTTGAATCGTGGCCTTCTTTATGTTTTTTTTTTCTCATCTGGTGATTGAAATGTTTTTTTTGCAGTTTGTCTATCTTCCAGATTGTGCGGCCTATTCCAGGTGAAATCTCGAATTGGGTTTGAAAAAGGACTTGAATCATTGGACAATATTGAAGTAATTATAATTTGAAGGGAAAATTGACAAAATAAGCCTTAAAGTCGATTCAGTTTTTTAATCACCCTTCTCGAAATAAAGTTTTCTAGTCACTGACATCACAAACTTTGTCAAATAACCTCTCATGTTCCTCTTACTTTTTTTTTCTCTTCCAGACTCCATCTCTCTTCTCTCTCCTCCGCTGATATTTTAGATTTTTTTTCTCCTCTCCGTTTTCTTATTGTTTTTCATTATTATCTTTTCCTCTTTTCAGCAAAACTTTTTTTTCTCATTCTCGCTAAAATTTTCTTGGAGTTTCTCTTTTCCATCTTCCCTCTTTCTCTATTTTTTCTATTACTATTATTCTCTTTCCTCTCTACCCACCACAAAAAGCAATTTTTTTCCTTCATGATTCTCGTGACTTTTAGTAATTGCTGACGATGGATGCATCAAAGCCGACGAAGGAAGTCGTTCGCCGAAGAAAGAAGATCAGTGGGGGAGGAGATAAAGAGAGAGAGAGCGAGGGTGAGCGAGAAAGAGCGAGGTTGAGCGGGAGAGAGCGAGGTTGAGCGTGAATTGAGGGAATCTAAAAATACTATCTCAATATTAATTCAAATTTATTTCCCGAAATCTATTCTCAATCTCATTAAATCGTCAACGTAGTTTTAATTAGGATTGAATTAAAAAACCCTCATTTTGCTTTCATCTCTTTCATTCCTAATTTAAAATTTAATCAAATGAAAATATCAATTTAAAATCTAATTACAAAAAGAAAGTATTCAATTTGAAATTTAATTCAAATTTGTTTCCCAAAATCTCTTTTTTAATTAGATTTTAAATTGATACATTTGATTAAAATTTAAATTAGGAATCAAAAATGGGAAAGCAAAATTGGGGGATTTGAAATTCAATTATAATTAAAACTACATTTAGAGATTTAAGGAGATTGATGAGAGATTTCGAGAAACAATTTGAATTAATATTGAGATTCCGTTTTTCTCAAATAGGGTTTTTTTTAAAATAAATTGCTTTTTGTGGTCAGTAAAGAAAAAAGGGAATAATATACAAAAAGATGGAAGAAGGAAAAGAGAAACTCCAAGAAAATTTGGAAGTCAAATATCAGTGGAGGGGTAATGAGGGACTTTAGGGGCTTTGACACTTAGATCACAGTAACCGACTTTGGGTGACTCGTCCCCGAATTGGGGGAAGCCCCAGTTATGCACCTCACGTGGCTCGAACCGGGGAGGCGGGTATCCCCATTCGGCCACAAACCACTACGCCACGACCTGCCCGTGGTTTAACTCTTCAGTTCTTAATCAACAAGATTAGGGTTTCTTTCTCTCCTCTTTCTTTCTTTCTCTTTCCATTTCTGAATCTAATGGGAAAATCTATCCTCCATATGTTTTGGTTACGCTAGAAGACCACAGGAGATGACTGCATCAGCTAGTTAACGCAGTTAGCTCACTTGGGTCAGTTGGCCAATATTATCGTTTTAGTGTTATGCTTTTAAGATTTAAGAGTTAGTTGGAAGGAGCTTGCATTCTGCTGGAGGGGAGATGGGAGGAACTAATCCAGAAATTGTAAATTTGTTATAGAGAGAGGGTGGGGGGAGGGAATAACTCAATAAGGATGGGGAGACATCAAACTTCTTGAATATCTGGTACTAGAAGATCTGCTCTTCTCTCTTCAATTAATTAATTAAGAGGTTCGAAAAGTTTGTTTGGAGACAAAAAGGTTATAATAACAGATGTTTCTCTCATTGTCTCGTATTTTATCTAATAACCATCCTGTGAACTTATGATTGGTTAGCATTTTTAGCAGTGATTTTATTTTCTCAGAGCTGTGGTTACATATAGTTCTTGATTTTTGTTTTTTTAAATTTCTATTAGAATGAAGATTCATTGTTTATTGTCTAAAACAAAAAAGAAGATCTGCACTTCTCAGCTATTGAACAAATGTCGTTACTTTTTCTGAAAAGGTACTTTAGATTTCCAAATGTTCTATTTATTTCGAACTCTGCCGTTATCATCTGAGTGACATCTACTGTTCATTCTCTCCGCAAGCAAAAAGTTATTGCTTTCTACTGCCAGCTGATGACTTTTCTTCTTTATCTTCTTTCTCTAATTTCAGAAATTCTACTACTTGGCTGTGGGAAATATACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTATAGCTTGA

mRNA sequence

ATGGCGGCGACGGCGACACAAAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCTGGAGGCCTGGACTCAGCCAGCCTCTGCCGTCGTTGAGACGCGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTTACGGTAAATGGAGTGGATTATGAAGGGAGCTTGCTCTGCGTTGGGAGCTTATTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCGGAGAGTTTGTCTATCTTCCAGATTGTGCGGCCTATTCCAGAAATTCTACTACTTGGCTGTGGGAAATATACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTATAGCTTGA

Coding sequence (CDS)

ATGGCGGCGACGGCGACACAAAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCTGGAGGCCTGGACTCAGCCAGCCTCTGCCGTCGTTGAGACGCGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTTACGGTAAATGGAGTGGATTATGAAGGGAGCTTGCTCTGCGTTGGGAGCTTATTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCGGAGAGTTTGTCTATCTTCCAGATTGTGCGGCCTATTCCAGAAATTCTACTACTTGGCTGTGGGAAATATACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTATAGCTTGA

Protein sequence

MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDTVLIA

Homology

[Close]

BLAST of MS026299 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 9.3e-69
Identity = 133/141 (94.33%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIRSLR DR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE
Sbjct: 3   ARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT ESLSIFQIVRPIPEIL+LGCG+YTEP
Sbjct: 63  TGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYTEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVDT
Sbjct: 123 VNPELRQFIRSTGMKLEAVDT 143

[Close]

BLAST of MS026299 vs. NCBI nr
Match: XP_022152792.1 (LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Momordica charantia])

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 137/145 (94.48%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ 60
           MAATA QK VATLPNLIRSLRKDR RPGLSQPLPSLRRAFSLYDQINL     EDQLRFQ
Sbjct: 1   MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL----XEDQLRFQ 60

Query: 61  RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK 120
           RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK
Sbjct: 61  RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK 120

Query: 121 YTEPVNPELRQFIRSTGMKLEAVDT 146
           YTEPVNPELRQFIRSTGMKLEAVDT
Sbjct: 121 YTEPVNPELRQFIRSTGMKLEAVDT 141

[Close]

BLAST of MS026299 vs. NCBI nr
Match: XP_023513625.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo] >KAG6593730.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-67
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE
Sbjct: 3   ARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIFQI+RPIPEIL+LGCG+Y EP
Sbjct: 63  TGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYIEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVD+
Sbjct: 123 VNPELRQFIRSTGMKLEAVDS 143

[Close]

BLAST of MS026299 vs. NCBI nr
Match: XP_022964366.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 8.7e-67
Identity = 128/141 (90.78%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE
Sbjct: 3   ARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIFQI+RPIPEIL+LGCG+Y EP
Sbjct: 63  TGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYIEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNP+LRQFIRSTGMKLEAVD+
Sbjct: 123 VNPQLRQFIRSTGMKLEAVDS 143

[Close]

BLAST of MS026299 vs. NCBI nr
Match: XP_031743290.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 8.7e-67
Identity = 127/141 (90.07%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE
Sbjct: 3   ARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNGVDYEGSLLCVG+LLMSW+P+KFSEIT++SLSIFQIVRPIPEIL+LGCG+YTEP
Sbjct: 63  TGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPIPEILILGCGRYTEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVDT
Sbjct: 123 VNPELRQFIRSTGMKLEAVDT 143

[Close]

BLAST of MS026299 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 27/86 (31.40%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 60  QRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCG 119
           + Y+  GF +NG    G    +   ++ W+   + +I  ESLS+F ++ P  EIL++G G
Sbjct: 66  ETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTG 125

Query: 120 KYTEPVNPELRQFIRSTGMKLEAVDT 146
              E ++P + +F+R  G+ +E  DT
Sbjct: 126 DRVERLDPNILKFMRQKGVAVEVQDT 151

[Close]

BLAST of MS026299 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 31/101 (30.69%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 45  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF 104
           +I+L+ N     +    Y   GFT+NG    G    +   ++ W+     +IT ES SIF
Sbjct: 47  RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIF 106

Query: 105 QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT 146
            ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  DT
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDT 147

[Close]

BLAST of MS026299 vs. ExPASy Swiss-Prot
Match: Q9JKL4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus OX=10090 GN=Ndufaf3 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 29/101 (28.71%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 45  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF 104
           +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W+     +IT ES S+F
Sbjct: 47  RISLLQSEFPQAVYIDSYSSRGFTICGNRVFGPCVLLPQTVVQWNVGSHQDITEESFSLF 106

Query: 105 QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT 146
            ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  DT
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHPQVLQAMRQRGIAVEVQDT 147

[Close]

BLAST of MS026299 vs. ExPASy Swiss-Prot
Match: A1L1F1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio OX=7955 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-08
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 62  YTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKY 121
           Y+  GF +NG    G    +   ++ W+    S+I+ ESLS+F ++ P  E+L+LG G  
Sbjct: 62  YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGAR 121

Query: 122 TEPVNPELRQFIRSTGMKLEAVDT 146
           TE ++ E+ + ++  G+ +E  DT
Sbjct: 122 TERLHAEVLEELKKRGIAVEVQDT 145

[Close]

BLAST of MS026299 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-08
Identity = 29/101 (28.71%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 45  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF 104
           +I+L+       +    Y+  GF VNG    G    +   ++ W+   + +IT ES S+F
Sbjct: 46  RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLF 105

Query: 105 QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT 146
            ++ P  EI+++G G  TE + P + + +R  G+ +E  DT
Sbjct: 106 WMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDT 146

[Close]

BLAST of MS026299 vs. ExPASy TrEMBL
Match: A0A6J1DH82 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Momordica charantia OX=3673 GN=LOC111020424 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.5e-68
Identity = 137/145 (94.48%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ 60
           MAATA QK VATLPNLIRSLRKDR RPGLSQPLPSLRRAFSLYDQINL     EDQLRFQ
Sbjct: 1   MAATARQKEVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINL----XEDQLRFQ 60

Query: 61  RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK 120
           RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK
Sbjct: 61  RYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGK 120

Query: 121 YTEPVNPELRQFIRSTGMKLEAVDT 146
           YTEPVNPELRQFIRSTGMKLEAVDT
Sbjct: 121 YTEPVNPELRQFIRSTGMKLEAVDT 141

[Close]

BLAST of MS026299 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67
Identity = 128/141 (90.78%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE
Sbjct: 3   ARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIFQI+RPIPEIL+LGCG+Y EP
Sbjct: 63  TGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYIEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNP+LRQFIRSTGMKLEAVD+
Sbjct: 123 VNPQLRQFIRSTGMKLEAVDS 143

[Close]

BLAST of MS026299 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 128/141 (90.78%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTE
Sbjct: 3   ARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNG+DYEGSLLCVG LLMSWSP+KFSEIT ESLSIFQI+RPIPEIL+LGCG+Y EP
Sbjct: 63  TGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRPIPEILVLGCGRYIEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVD+
Sbjct: 123 VNPELRQFIRSTGMKLEAVDS 143

[Close]

BLAST of MS026299 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 126/141 (89.36%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLP+LIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTE
Sbjct: 3   ARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT +SLSIFQIVRPIPEIL+LGCG+YTEP
Sbjct: 63  TGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYTEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVDT
Sbjct: 123 VNPELRQFIRSTGMKLEAVDT 143

[Close]

BLAST of MS026299 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 126/141 (89.36%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 5   ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTE 64
           A QKAVATLP+LIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTE
Sbjct: 3   ARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRYTE 62

Query: 65  TGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEP 124
           TGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT +SLSIFQIVRPIPEIL+LGCG+YTEP
Sbjct: 63  TGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYTEP 122

Query: 125 VNPELRQFIRSTGMKLEAVDT 146
           VNPELRQFIRSTGMKLEAVDT
Sbjct: 123 VNPELRQFIRSTGMKLEAVDT 143

[Close]

BLAST of MS026299 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-54
Identity = 100/139 (71.94%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 7   QKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETG 66
           QKA+ATLP LI+S+R +  +   S  LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET 
Sbjct: 5   QKAMATLPKLIQSMRNEVTKQP-SLVLPSLRRAFSLYDQINLIDNVPEDQLRFQEFDETS 64

Query: 67  FTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVN 126
           FTVNGV YEGSLLCVG+LLMSWSPR FS+IT +SLSIFQ VRPIPE+L++GCG+Y  P+N
Sbjct: 65  FTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRPIPELLIVGCGRYNHPLN 124

Query: 127 PELRQFIRSTGMKLEAVDT 146
           P++RQF++S GMKLE VD+
Sbjct: 125 PQVRQFVKSIGMKLETVDS 142

[Close]

BLAST of MS026299 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-53
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 8   KAVATLPNLIRSLRKDRWRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETG 67
           K++ATLP LI+S+RK+   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T 
Sbjct: 6   KSMATLPKLIQSMRKE--VPKHSNPVLPSLRRAFSLYDQINLIDNVPEDQLRFQEFNDTS 65

Query: 68  FTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVN 127
           FTVNGV YEGSLLCVG+LLMSWSPRKFSEIT +SLSIFQ VRPIPE+L++GCG+   PV 
Sbjct: 66  FTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVGCGRDIHPVT 125

Query: 128 PELRQFIRSTGMKLEAVDT 146
           PE+RQF++S GMKLE VD+
Sbjct: 126 PEVRQFVKSLGMKLETVDS 142

The following BLAST results are available for this feature:

BLAST of MS026299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906819.1	9.3e-69	94.33	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin...	[more]
XP_022152792.1	1.8e-67	94.48	LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly...	[more]
XP_023513625.1	3.9e-67	91.49	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur...	[more]
XP_022964366.1	8.7e-67	90.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur...	[more]
XP_031743290.1	8.7e-67	90.07	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum...	[more]

BLAST of MS026299 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFN1	3.9e-09	31.40	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ...	[more]
O08776	1.1e-08	30.69	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n...	[more]
Q9JKL4	3.3e-08	28.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musc...	[more]
A1L1F1	5.6e-08	32.14	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio re...	[more]
Q2HJI2	7.3e-08	28.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur...	[more]

BLAST of MS026299 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DH82	8.5e-68	94.48	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Momordic...	[more]
A0A6J1HIQ3	4.2e-67	90.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit...	[more]
A0A6J1KD25	1.2e-66	90.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit...	[more]
A0A5A7TES8	4.6e-66	89.36	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ...	[more]
A0A1S3CB84	4.6e-66	89.36	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ...	[more]

BLAST of MS026299 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60150.1	6.9e-54	71.94	Protein of unknown function (DUF498/DUF598)	[more]
AT2G44525.1	2.0e-53	73.38	Protein of unknown function (DUF498/DUF598)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007523	NDUFAF3/Mth938 domain-containing protein	PFAM	PF04430	DUF498	coord: 60..145 e-value: 3.4E-19 score: 68.9
IPR007523	NDUFAF3/Mth938 domain-containing protein	PANTHER	PTHR21192	NUCLEAR PROTEIN E3-3	coord: 7..145
IPR036748	MTH938-like superfamily	GENE3D	3.40.1230.10		coord: 43..147 e-value: 2.9E-20 score: 74.1
IPR036748	MTH938-like superfamily	SUPERFAMILY	64076	MTH938-like	coord: 46..145
None	No IPR available	PANTHER	PTHR21192:SF4	BNAC04G03830D PROTEIN	coord: 7..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS026299.1	MS026299.1	mRNA