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MS026238 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATCAGCCCATCATCATCTAAGAGCTCGCTTCTGTAAGTCAAAACCGCCTTCACTTTCATATATACAAAATTCTTAGTTAGCTCTTTCCCGAAATGTCTTTCTTCCTGGATGTTATCAGAACTGTATTATAAACCTTATGATGCCAAATTGTGACATTTGTTATATCCTCTCTCAAATGTTACAGGAACTTAGGCTTGGCCCCGATCCATCCCGCTCAACATTTGTTCTTGATTTGTTCCCCACTTCGTGACTACATGGCTCCAGTCAAATCACTATTTGCTGAAGGAAAAGATGTAGAATTGAATCAACTTCTTGAGAGCACACTGAAAAGCTATAGGATAAGCAACGCAGAACTAGCGAAGGTACTCGTCAAAATCAAGCATAAAGAAGGTAACTTGGATGCAGTTTTCAATGTGCTTAAAGAGATGGCTTACAGTGGCTTACTATCATACAGTTCTGGTTACATGGGCGTGTGA ATGGAAATCAGCCCATCATCATCTAAGAGCTCGCTTCTGAACTTAGGCTTGGCCCCGATCCATCCCGCTCAACATTTGTTCTTGATTTGTTCCCCACTTCGTGACTACATGGCTCCAGTCAAATCACTATTTGCTGAAGGAAAAGATGTAGAATTGAATCAACTTCTTGAGAGCACACTGAAAAGCTATAGGATAAGCAACGCAGAACTAGCGAAGGTACTCGTCAAAATCAAGCATAAAGAAGGTAACTTGGATGCAGTTTTCAATGTGCTTAAAGAGATGGCTTACAGTGGCTTACTATCATACAGTTCTGGTTACATGGGCGTGTGA ATGGAAATCAGCCCATCATCATCTAAGAGCTCGCTTCTGAACTTAGGCTTGGCCCCGATCCATCCCGCTCAACATTTGTTCTTGATTTGTTCCCCACTTCGTGACTACATGGCTCCAGTCAAATCACTATTTGCTGAAGGAAAAGATGTAGAATTGAATCAACTTCTTGAGAGCACACTGAAAAGCTATAGGATAAGCAACGCAGAACTAGCGAAGGTACTCGTCAAAATCAAGCATAAAGAAGGTAACTTGGATGCAGTTTTCAATGTGCTTAAAGAGATGGCTTACAGTGGCTTACTATCATACAGTTCTGGTTACATGGGCGTGTGA MEISPSSSKSSLLNLGLAPIHPAQHLFLICSPLRDYMAPVKSLFAEGKDVELNQLLESTLKSYRISNAELAKVLVKIKHKEGNLDAVFNVLKEMAYSGLLSYSSGYMGV Homology
BLAST of MS026238 vs. NCBI nr
Match: XP_022135848.1 (pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135849.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135850.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia] >XP_022135851.1 pentatricopeptide repeat-containing protein At5g39710 [Momordica charantia]) HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MS026238 vs. NCBI nr
Match: XP_038888734.1 (pentatricopeptide repeat-containing protein At5g39710 [Benincasa hispida]) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18 Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 0
BLAST of MS026238 vs. NCBI nr
Match: XP_016901757.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g39710-like [Cucumis melo]) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MS026238 vs. NCBI nr
Match: KAA0031285.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MS026238 vs. NCBI nr
Match: XP_022972338.1 (pentatricopeptide repeat-containing protein At5g39710 [Cucurbita maxima]) HSP 1 Score: 95.5 bits (236), Expect = 3.0e-16 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of MS026238 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of MS026238 vs. ExPASy TrEMBL
Match: A0A6J1C1W8 (pentatricopeptide repeat-containing protein At5g39710 OS=Momordica charantia OX=3673 GN=LOC111007700 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 6.9e-19 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of MS026238 vs. ExPASy TrEMBL
Match: A0A5D3C4F1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00380 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.5e-17 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MS026238 vs. ExPASy TrEMBL
Match: A0A1S4E0J0 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g39710-like OS=Cucumis melo OX=3656 GN=LOC103495222 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.5e-17 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of MS026238 vs. ExPASy TrEMBL
Match: A0A6J1I9N0 (pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita maxima OX=3661 GN=LOC111470919 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16 Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of MS026238 vs. ExPASy TrEMBL
Match: A0A6J1GKD6 (pentatricopeptide repeat-containing protein At5g39710 OS=Cucurbita moschata OX=3662 GN=LOC111455115 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16 Identity = 50/71 (70.42%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of MS026238 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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